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Pathway Description
Operon: Cytosine Transport
Escherichia coli
Signaling Pathway
The codBA operon in E. coli contains two genes which encode proteins involved in cytosine entry into the cell, as well as its deamination. The operon can be activated by the bining of nitrogen assimilation regulatory protein Nac, which activates transcription at the promoter in the case of low nitrogen levels in the cell. With this operon activated, cytosine can be broken down into the nitrogen source, and can even be the sole nitrogen source if necessary. The operon can also be deactivated by the binding of the PurR transcriptional repressor to the promoter. This repressor is activated by a purine such as guanine, or its derivatives such as hypoxanthine.
The first gene in the operon, codB, encodes cytosine permease, an enzyme that is necessary for cytosine to be able to enter the cell.
The second gene, codA, encodes cytosine deaminase, an enzyme that catalyzes the deamination of cytosine into uracil, with the addition of a water molecule.
References
Operon: Cytosine Transport References
Danielsen S, Kilstrup M, Barilla K, Jochimsen B, Neuhard J: Characterization of the Escherichia coli codBA operon encoding cytosine permease and cytosine deaminase. Mol Microbiol. 1992 May;6(10):1335-44.
Pubmed: 1640834
Qi F, Turnbough CL Jr: Regulation of codBA operon expression in Escherichia coli by UTP-dependent reiterative transcription and UTP-sensitive transcriptional start site switching. J Mol Biol. 1995 Dec 8;254(4):552-65. doi: 10.1006/jmbi.1995.0638.
Pubmed: 7500333
Muse WB, Rosario CJ, Bender RA: Nitrogen regulation of the codBA (cytosine deaminase) operon from Escherichia coli by the nitrogen assimilation control protein, NAC. J Bacteriol. 2003 May;185(9):2920-6. doi: 10.1128/jb.185.9.2920-2926.2003.
Pubmed: 12700271
Andersen L, Kilstrup M, Neuhard J: Pyrimidine, purine and nitrogen control of cytosine deaminase synthesis in Escherichia coli K 12. Involvement of the glnLG and purR genes in the regulation of codA expression. Arch Microbiol. 1989;152(2):115-8.
Pubmed: 2673119
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