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Pathway Description
Operon: High Frequency of Lysogenization Repression
Escherichia coli
Protein Pathway
The high frequency of lyzogenization (hfl) operon is a polycistronic operon consisting of the genes: hfq, hflX, hflK and hflC. hfq encodes the RNA-binding protein Hfq which aids in RNA stability , hflX encodes a GTPase involved in ribosomal assembly, hflK encodes a membrane-associated protein and hflC encodes a protease regulatory subunit which regulates protease activity, affecting lysogeny and other cellular processes. This operon is regulated by CRP-cAMP DNA-binding transcriptional dual regulator being binded to a crp binding site in the -96.5 bp from the promoter, thus activating the transcription of the hfl operon. This activation is dependent on the presence of cAMP, which is high when glucose levels are low. The pathway is repressed when cAMP levels decrease when glucose levels are high, thus preventing formation of CRP-cAMP complex. This in turn prevents RNA polymerase from binding efficiently to the promoter thus repressing transcription
References
Operon: High Frequency of Lysogenization Repression References
Huerta AM, Collado-Vides J: Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals. J Mol Biol. 2003 Oct 17;333(2):261-78.
Pubmed: 14529615
Lin HH, Hsu CC, Yang CD, Ju YW, Chen YP, Tseng CP: Negative effect of glucose on ompA mRNA stability: a potential role of cyclic AMP in the repression of hfq in Escherichia coli. J Bacteriol. 2011 Oct;193(20):5833-40. doi: 10.1128/JB.05359-11. Epub 2011 Aug 12.
Pubmed: 21840983
Nonaka G, Blankschien M, Herman C, Gross CA, Rhodius VA: Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Genes Dev. 2006 Jul 1;20(13):1776-89. doi: 10.1101/gad.1428206.
Pubmed: 16818608
Tsui HC, Feng G, Winkler ME: Transcription of the mutL repair, miaA tRNA modification, hfq pleiotropic regulator, and hflA region protease genes of Escherichia coli K-12 from clustered Esigma32-specific promoters during heat shock. J Bacteriol. 1996 Oct;178(19):5719-31.
Pubmed: 8824618
Zaslaver A, Bren A, Ronen M, Itzkovitz S, Kikoin I, Shavit S, Liebermeister W, Surette MG, Alon U: A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat Methods. 2006 Aug;3(8):623-8. doi: 10.1038/nmeth895.
Pubmed: 16862137
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