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Pathway Description
Serine Metabolism
Arabidopsis thaliana
Metabolic Pathway
The biosynthesis of serine begins in the chloroplast with 3-phospho-D-glycerate being metabolize into 3-phosphohydroxypyruvate through a 3-phosphoglycerate dehydrogenase. The resulting compound 3-phosphohydroxypyruvate is transaminated into 3-phospho-L-serine through a phosphoserine transaminase. This is followed by 3-phospho-L-serine being dephosphorylated through a phosphoserine phosphatase resulting in the release of a phosphate and Serine.
Serine can also be incorporated into the mitochondrion and then serine can then be used to synthesize glycine through a mitochondrial serine hydroxymethyltransferase. Glycine is then used to synthesize formic acid by first being metabolized into 5,10 methylene THF, which is transformed into a 5,10 methenyltetrahydrofolate , followed by an N10 formyl tetrahydrofolate and lastly formic acid, all through a mitochondrial C1-tetrahydrofolate synthase.
It can also be used in tryptophan biosynthesis, glycine biosynthesis and cysteine biosynthesis
References
Serine Metabolism References
Ho CL, Saito K: Molecular biology of the plastidic phosphorylated serine biosynthetic pathway in Arabidopsis thaliana. Amino Acids. 2001;20(3):243-59.
Pubmed: 11354602
Ho CL, Noji M, Saito M, Yamazaki M, Saito K: Molecular characterization of plastidic phosphoserine aminotransferase in serine biosynthesis from Arabidopsis. Plant J. 1998 Nov;16(4):443-52.
Pubmed: 9881164
Ho CL, Noji M, Saito K: Plastidic pathway of serine biosynthesis. Molecular cloning and expression of 3-phosphoserine phosphatase from Arabidopsis thaliana. J Biol Chem. 1999 Apr 16;274(16):11007-12.
Pubmed: 10196182
Ho CL, Noji M, Saito M, Saito K: Regulation of serine biosynthesis in Arabidopsis. Crucial role of plastidic 3-phosphoglycerate dehydrogenase in non-photosynthetic tissues. J Biol Chem. 1999 Jan 1;274(1):397-402.
Pubmed: 9867856
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