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Pathway Description
Urate Degradation to Glyoxylate
Arabidopsis thaliana
Metabolic Pathway
Purine nucleotides are eventually degraded to ammonia and carbon dioxide. This pathway begins in the peroxisome and follows the degradation a urate intermediate to glyoxylate. The last three steps take place in the endoplasmic reticulum. First, uricase converts urate into 5-hydroxyisourate. Steps two and three are catalyzed by the bifunctional enzyme S-allantoin synthase: the conversion of 5-hydroxyisourate into 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate (OHCU) and the conversion of OHCU into S-allantoin. Fourth, allantoinase requires zinc ion as a cofactor to catalyze the conversion of S-allantoin into allantoate. Next allantoate must be transported out of the peroxisome and into the endoplasmic reticulum. Fifth, allantoate amidohydrolase catalyzes the conversion of allantoate into S-ureidoglycine. This enzyme is a homodimer and requires manganese ion as a cofactor. Sixth, ureidoglycine aminohydrolase requires a manganese ion as a cofactor to catalyze the conversion of S-ureidoglycine into S-ureidoglycolate. Seventh, ureidoglycolate amidohydrolase catalyzes the conversion of S-ureidoglycolate into glyoxylate.
References
Urate Degradation to Glyoxylate References
Lamberto I, Percudani R, Gatti R, Folli C, Petrucco S: Conserved alternative splicing of Arabidopsis transthyretin-like determines protein localization and S-allantoin synthesis in peroxisomes. Plant Cell. 2010 May;22(5):1564-74. doi: 10.1105/tpc.109.070102. Epub 2010 May 28.
Pubmed: 20511299
Yang J, Han KH: Functional characterization of allantoinase genes from Arabidopsis and a nonureide-type legume black locust. Plant Physiol. 2004 Mar;134(3):1039-49. doi: 10.1104/pp.103.034637. Epub 2004 Feb 19.
Pubmed: 14976234
Todd CD, Polacco JC: AtAAH encodes a protein with allantoate amidohydrolase activity from Arabidopsis thaliana. Planta. 2006 Apr;223(5):1108-13. doi: 10.1007/s00425-006-0236-x. Epub 2006 Feb 22.
Pubmed: 16496096
Shin I, Percudani R, Rhee S: Structural and functional insights into (S)-ureidoglycine aminohydrolase, key enzyme of purine catabolism in Arabidopsis thaliana. J Biol Chem. 2012 May 25;287(22):18796-805. doi: 10.1074/jbc.M111.331819. Epub 2012 Apr 5.
Pubmed: 22493446
Werner AK, Romeis T, Witte CP: Ureide catabolism in Arabidopsis thaliana and Escherichia coli. Nat Chem Biol. 2010 Jan;6(1):19-21. doi: 10.1038/nchembio.265. Epub 2009 Nov 22.
Pubmed: 19935661
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