PathWhiz

Pathway Description

Secondary metabolites pathways

Bacteria

Metabolic Pathway

References

Secondary metabolites pathways References

Jia N, Ding MZ, Luo H, Gao F, Yuan YJ: Complete genome sequencing and antibiotics biosynthesis pathways analysis of Streptomyces lydicus 103. Sci Rep. 2017 Mar 20;7:44786. doi: 10.1038/srep44786.

Pubmed: 28317865

Enter relative concentration values (without units). Elements will be highlighted in a color gradient where red = lowest concentration and green = highest concentration. For the best results, view the pathway in Black and White.

Visualize Compound Data

		2-C-Methyl-D-erythritol-2,4-cyclodiphosphate
		1-Deoxy-D-xylulose 5-phosphate
		1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
		2-C-methyl-D-erythritol 4-phosphate
		2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
		4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
		4Fe-4S
		Adenosine diphosphate
		Adenosine triphosphate
		Carbon dioxide
		Cobalt
		Cytidine monophosphate
		Cytidine triphosphate
		D-Glyceraldehyde 3-phosphate
		Dimethylallylpyrophosphate
		FAD
		Hydrogen Ion
		Isopentenyl pyrophosphate
		Magnesium
		Manganese
		NADH
		NADP
		NADPH
		Pyrophosphate
		Water
		Zinc (II) ion

Visualize Protein Data

		1-deoxy-D-xylulose 5-phosphate reductoisomerase
		1-deoxy-D-xylulose-5-phosphate synthase
		2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
		2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
		4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
		4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
		4-hydroxy-3-methylbut-2-enyl diphosphate reductase
		Flagellar biosynthetic protein FliQ
		Isopentenyl-diphosphate Delta-isomerase
		NADH dehydrogenase
		Sugar ABC transporter permease

Clear

Downloads

SVG Image

Simple SVG Image

Greyscale SVG Image

BioPAX

SBGN

SBML

PWML

PNG Image

All files (.zip)

Settings