Protein/105 Cytoplasm/Stoichiometry/6.0
type: Stoichiometry
physical entity: Nucleoside diphosphate kinase A
stoichiometric coefficient: 6.0

Reference/PubChem-compound 6022
type: UnificationXref
id: 6022
db: PubChem-compound

Reference/ChemSpider 17215925
type: UnificationXref
id: 17215925
db: ChemSpider

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Reference/ChEBI CHEBI 58210
type: UnificationXref
id: CHEBI:58210
db: ChEBI

Cytochrome P450 2E1
type: ProteinReference
xref: Reference/UniProt P05181
organism: Homo sapiens

Thymidine kinase, cytosolic
type: Protein
cellular location: Cytoplasm
entity reference: Thymidine kinase, cytosolic

Solute carrier family 22 member 11
type: Protein
entity reference: Solute carrier family 22 member 11

Gag polyprotein
type: ProteinReference
xref: Reference/UniProt P04591

Reference/UniProt O15440
type: UnificationXref
id: O15440
db: UniProt

direct_interaction
type: InteractionVocabulary

Thymidylate kinase
type: Protein
cellular location: Cytoplasm
entity reference: Thymidylate kinase

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

Reference/UniProt P23919
type: UnificationXref
id: P23919
db: UniProt

ChemicalStructure/PW C104784
type: ChemicalStructure
structure format: SMILES

Cytochrome P450 3A4
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Cytochrome P450 3A4

Reaction212820
type: BiochemicalReaction
participant stoichiometry: Compound/PW C108888/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108889/Stoichiometry/1.0
right: 3'Amino-3'-deoxy-5'-glucopyranuronosylthymidine
spontaneous: false
left: Zidovudine glucuronide
name: Zidovudine glucuronide → 3'Amino-3'-deoxy-5'-glucopyranuronosylthymidine
conversion direction: LEFT_TO_RIGHT

Reference/CAS 2616-64-0
type: UnificationXref
id: 2616-64-0
db: CAS

Solute carrier family 22 member 8
type: ProteinReference
xref: Reference/UniProt Q8TCC7

Reference/HMDB HMDB0000538
type: UnificationXref
id: HMDB0000538
db: HMDB

Cytochrome P450 3A4
type: ProteinReference
xref: Reference/UniProt P08684
organism: Homo sapiens

Zidovudine 5'-Triphosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 72187
xref: Reference/ChemSpider 65158
xref: Reference/HMDB HMDB0061727
chemical formula: C10H16N5O13P3
molecular weight: 506.99576
structure: ChemicalStructure/PW C040735

NADPH
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: NADPH

Compound/PW C104784 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: FMN
stoichiometric coefficient: 1.0

Reference/BioCyc ATP
type: UnificationXref
id: ATP
db: BioCyc

Solute carrier family 22 member 7
type: ProteinReference
xref: Reference/UniProt Q9Y694

Uridine diphosphate glucuronic acid
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Uridine diphosphate glucuronic acid

Reference/UniProt O15439
type: UnificationXref
id: O15439
db: UniProt

Reference/UniProt Q4U2R8
type: UnificationXref
id: Q4U2R8
db: UniProt

Compound/PW C000146 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 1.0

Reference/BioCyc ADP
type: UnificationXref
id: ADP
db: BioCyc

3'-Amino-3'-deoxythymidine
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: 3'-Amino-3'-deoxythymidine

NADPH--cytochrome P450 reductase
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: NADPH--cytochrome P450 reductase

Cytochrome P450 2A6
type: ProteinReference
xref: Reference/UniProt P11509
organism: Homo sapiens

Reference/CAS 53-59-8
type: UnificationXref
id: 53-59-8
db: CAS

Reference/PubChem-compound 65374
type: UnificationXref
id: 65374
db: PubChem-compound

Reference/ChemSpider 5742
type: UnificationXref
id: 5742
db: ChemSpider

Solute carrier family 22 member 6
type: Protein
entity reference: Solute carrier family 22 member 6

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Reference/ChEBI CHEBI 17200
type: UnificationXref
id: CHEBI:17200
db: ChEBI

Compound/PW C001065 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxygen
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16474
type: UnificationXref
id: CHEBI:16474
db: ChEBI

Hydrogen Ion
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Hydrogen Ion

Reference/ChemSpider 952
type: UnificationXref
id: 952
db: ChemSpider

Zidovudine glucuronide
type: SmallMolecule
entity reference: Zidovudine glucuronide

3'Amino-3'-deoxy-5'-glucopyranuronosylthymidine
type: SmallMolecule
entity reference: 3'Amino-3'-deoxy-5'-glucopyranuronosylthymidine

Reference/PubChem-compound 455742
type: UnificationXref
id: 455742
db: PubChem-compound

Reference/UniProt P11712
type: UnificationXref
id: P11712
db: UniProt

Reference/BioCyc UDP-GLUCURONATE
type: UnificationXref
id: UDP-GLUCURONATE
db: BioCyc

Reference/PubChem-compound 6031
type: UnificationXref
id: 6031
db: PubChem-compound

Reference/PubChem-compound 445395
type: UnificationXref
id: 445395
db: PubChem-compound

Reference/UniProt P04183
type: UnificationXref
id: P04183
db: UniProt

Cytochrome P450 2C9
type: ProteinReference
xref: Reference/UniProt P11712
organism: Homo sapiens

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

NADPH--cytochrome P450 reductase
type: ProteinReference
xref: Reference/UniProt P16435
organism: Homo sapiens

Zidovudine glucuronide
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Zidovudine glucuronide

Compound/PW C008998 Extracellular Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine
stoichiometric coefficient: 1.0

ChemicalStructure/PW C000201
type: ChemicalStructure
structure format: SMILES

NADPH
type: SmallMoleculeReference
xref: Reference/CAS 53-57-6
xref: Reference/HMDB HMDB0000221
xref: Reference/PubChem-compound 22833512
xref: Reference/BioCyc NADPH
xref: Reference/ChemSpider 17215925
xref: Reference/KEGG Compound C00005
xref: Reference/ChEBI CHEBI 16474
chemical formula: C21H30N7O17P3
molecular weight: 745.0911
structure: ChemicalStructure/PW C000146

Reference/CAS 5666-16-0
type: UnificationXref
id: 5666-16-0
db: CAS

Zidovudine monophosphate
type: SmallMolecule
cellular location: Extracellular Space
entity reference: Zidovudine monophosphate

NADP
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00006
xref: Reference/CAS 53-59-8
xref: Reference/BioCyc NAD(P)
xref: Reference/HMDB HMDB0000217
xref: Reference/ChEBI CHEBI 18009
xref: Reference/PubChem-compound 5886
xref: Reference/ChemSpider 5675
chemical formula: C21H28N7O17P3
molecular weight: 743.07544
structure: ChemicalStructure/PW C000143

Reference/ChemSpider 32555
type: UnificationXref
id: 32555
db: ChemSpider

Reference/BioCyc NADPH
type: UnificationXref
id: NADPH
db: BioCyc

Uridine diphosphate glucuronic acid
type: SmallMoleculeReference
xref: Reference/BioCyc UDP-GLUCURONATE
xref: Reference/CAS 2616-64-0
xref: Reference/PubChem-compound 17473
xref: Reference/HMDB HMDB0000935
xref: Reference/ChEBI CHEBI 17200
xref: Reference/ChemSpider 16522
xref: Reference/KEGG Compound C00167
chemical formula: C15H22N2O18P2
molecular weight: 580.0343
structure: ChemicalStructure/PW C000746

Compound/PW C040034 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Reference/BioCyc CPD-6641
type: UnificationXref
id: CPD-6641
db: BioCyc

Nucleoside diphosphate kinase A
type: ProteinReference
xref: Reference/UniProt P15531
organism: Homo sapiens

Compound/PW C000891 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: FMNH2
stoichiometric coefficient: 1.0

Reference/UniProt P04591
type: UnificationXref
id: P04591
db: UniProt

Reference/PathWhiz PW123945
type: UnificationXref
id: PW123945
db: PathWhiz

Solute carrier family 28 member 3
type: Protein
entity reference: Solute carrier family 28 member 3

FMN
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: FMN

Reference/HMDB HMDB0000217
type: UnificationXref
id: HMDB0000217
db: HMDB

UDP-glucuronosyltransferase 2B7
type: ProteinReference
xref: Reference/UniProt P16662
organism: Homo sapiens

3'-Amino-3'-deoxythymidine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 108074
chemical formula: C10H15N3O4
molecular weight: 241.10626
structure: ChemicalStructure/PW C108887

Zidovudine glucuronide
type: SmallMoleculeReference
xref: Reference/PubChem-compound 21591811
chemical formula: C16H21N5O10
molecular weight: 443.12885
structure: ChemicalStructure/PW C108888

3'Amino-3'-deoxy-5'-glucopyranuronosylthymidine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 159513
chemical formula: C16H23N3O10
molecular weight: 417.13834
structure: ChemicalStructure/PW C108889

Solute carrier family 22 member 11
type: ProteinReference
xref: Reference/UniProt Q9NSA0

Reference/KEGG Compound C00008
type: UnificationXref
id: C00008
db: KEGG Compound

Reference/KEGG Compound C00007
type: UnificationXref
id: C00007
db: KEGG Compound

Oxygen
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Oxygen

Reference/KEGG Compound C00006
type: UnificationXref
id: C00006
db: KEGG Compound

Compound/PW C108888/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine glucuronide
stoichiometric coefficient: 1.0

ReactionCatalysis202447
type: Catalysis
controller: Cytochrome P450 2A6
controlled: Reaction212806
control type: ACTIVATION

FMN
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00061
xref: Reference/ChEBI CHEBI 58210
xref: Reference/PubChem-compound 44229199
chemical formula: C17H18N4O9P
molecular weight: 453.0828
structure: ChemicalStructure/PW C104784

Reference/SMPDB SMP0122630
type: UnificationXref
id: SMP0122630
db: SMPDB

ReactionCatalysis202448
type: Catalysis
controller: Cytochrome P450 2E1
controlled: Reaction212806
control type: ACTIVATION

Reference/ChEBI CHEBI 18009
type: UnificationXref
id: CHEBI:18009
db: ChEBI

ReactionCatalysis202449
type: Catalysis
controller: NADPH--cytochrome P450 reductase
controlled: Reaction212806
control type: ACTIVATION

ReactionCatalysis202443
type: Catalysis
controller: Nucleoside diphosphate kinase A
controlled: Reaction212804
control type: ACTIVATION

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

ReactionCatalysis202446
type: Catalysis
controller: Cytochrome P450 2C9
controlled: Reaction212806
control type: ACTIVATION

Reference/KEGG Compound C00005
type: UnificationXref
id: C00005
db: KEGG Compound

ReactionCatalysis202441
type: Catalysis
controller: Thymidine kinase, cytosolic
controlled: Reaction212801
control type: ACTIVATION

Reference/KEGG Compound C00002
type: UnificationXref
id: C00002
db: KEGG Compound

ReactionCatalysis202442
type: Catalysis
controller: Thymidylate kinase
controlled: 2.7.4.9
control type: ACTIVATION

ChemicalStructure/PW C000143
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000221
type: UnificationXref
id: HMDB0000221
db: HMDB

Zidovudine monophosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 65374
chemical formula: C10H14N5O7P
molecular weight: 347.06308
structure: ChemicalStructure/PW C108890

Zidovudine diphosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 455742
chemical formula: C10H15N5O10P2
molecular weight: 427.02942
structure: ChemicalStructure/PW C108891

Multidrug resistance-associated protein 4
type: Protein
entity reference: Multidrug resistance-associated protein 4

ChemicalStructure/PW C000146
type: ChemicalStructure
structure format: SMILES

Multidrug resistance-associated protein 5
type: Protein
entity reference: Multidrug resistance-associated protein 5

Reference/HMDB HMDB0061727
type: UnificationXref
id: HMDB0061727
db: HMDB

Reference/PubChem-compound 17473
type: UnificationXref
id: 17473
db: PubChem-compound

Reference/CAS 53-57-6
type: UnificationXref
id: 53-57-6
db: CAS

Reference/HMDB HMDB0014638
type: UnificationXref
id: HMDB0014638
db: HMDB

Adenosine triphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Adenosine triphosphate

ATP-binding cassette sub-family G member 2
type: Protein
entity reference: ATP-binding cassette sub-family G member 2

Reference/KEGG Compound C00015
type: UnificationXref
id: C00015
db: KEGG Compound

Zidovudine 5'-Triphosphate
type: SmallMolecule
entity reference: Zidovudine 5'-Triphosphate

Extracellular Space
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005615

Reference/KEGG Compound C07210
type: UnificationXref
id: C07210
db: KEGG Compound

Reference/PubChem-compound 21591811
type: UnificationXref
id: 21591811
db: PubChem-compound

Compound/PW C108891 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine diphosphate
stoichiometric coefficient: 1.0

Reference/BioCyc NAD(P)
type: UnificationXref
id: NAD(P)
db: BioCyc

Cytochrome P450 2E1
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Cytochrome P450 2E1

ChemicalStructure/PW C008998
type: ChemicalStructure
structure format: SMILES
structure data: CC1=CN([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)C(=O)NC1=O

Reference/PubChem-compound 5957
type: UnificationXref
id: 5957
db: PubChem-compound

Compound/PW C000143 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16048
type: UnificationXref
id: CHEBI:16048
db: ChEBI

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Sodium/nucleoside cotransporter 1
type: Protein
entity reference: Sodium/nucleoside cotransporter 1

Reaction212801
type: BiochemicalReaction
participant stoichiometry: Compound/PW C008998 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108890 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Cytoplasm/Stoichiometry/1.0
right: Zidovudine monophosphate
right: Hydrogen Ion
right: Adenosine diphosphate
spontaneous: false
left: Zidovudine
left: Adenosine triphosphate
name: Adenosine triphosphate + Zidovudine → Adenosine diphosphate + Hydrogen Ion + Zidovudine monophosphate
conversion direction: LEFT_TO_RIGHT

Compound/PW C040735 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine 5'-Triphosphate
stoichiometric coefficient: 1.0

2.7.4.9
type: BiochemicalReaction
participant stoichiometry: Compound/PW C108890 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108891 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Cytoplasm/Stoichiometry/1.0
right: Zidovudine diphosphate
right: Adenosine diphosphate
spontaneous: false
EC number: 2.7.4.9
left: Zidovudine monophosphate
left: Adenosine triphosphate
name: Adenosine triphosphate + Zidovudine monophosphate → Adenosine diphosphate + Zidovudine diphosphate
conversion direction: LEFT_TO_RIGHT

Solute carrier family 22 member 6
type: ProteinReference
xref: Reference/UniProt Q4U2R8

Reference/UniProt Q8TCC7
type: UnificationXref
id: Q8TCC7
db: UniProt

Reference/CAS 56-65-5
type: UnificationXref
id: 56-65-5
db: CAS

Compound/PW C108888 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine glucuronide
stoichiometric coefficient: 1.0

Reference/UniProt P08183
type: UnificationXref
id: P08183
db: UniProt

Adenosine diphosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00008
xref: Reference/PubChem-compound 6022
xref: Reference/ChemSpider 5800
xref: Reference/CAS 58-64-0
xref: Reference/BioCyc ADP
xref: Reference/ChEBI CHEBI 16761
xref: Reference/HMDB HMDB0001341
chemical formula: C10H15N5O10P2
molecular weight: 427.02942
structure: ChemicalStructure/PW C001034

Reference/GENE ONTOLOGY GO 0005615
type: UnificationXref
id: GO:0005615
db: GENE ONTOLOGY

Reference/GENE ONTOLOGY GO 0005737
type: UnificationXref
id: GO:0005737
db: GENE ONTOLOGY

Cytochrome P450 2A6
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Cytochrome P450 2A6

Nucleoside diphosphate kinase A
type: Protein
cellular location: Cytoplasm
entity reference: Nucleoside diphosphate kinase A

Reaction212804
type: BiochemicalReaction
participant stoichiometry: Compound/PW C108891 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040735 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Cytoplasm/Stoichiometry/1.0
right: Zidovudine 5'-Triphosphate
right: Adenosine diphosphate
spontaneous: false
left: Zidovudine diphosphate
left: Adenosine triphosphate
name: Adenosine triphosphate + Zidovudine diphosphate → Adenosine diphosphate + Zidovudine 5'-Triphosphate
conversion direction: LEFT_TO_RIGHT

Reaction212806
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000146 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C008998 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C104784 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108887 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000891 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001065 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000143 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
right: Water
right: 3'-Amino-3'-deoxythymidine
right: FMN
right: Hydrogen Ion
right: NADP
spontaneous: false
left: Oxygen
left: Zidovudine
left: NADPH
left: FMNH2
name: FMNH2 + NADPH + Oxygen + Zidovudine → 3'-Amino-3'-deoxythymidine + FMN + Hydrogen Ion + NADP + Water
conversion direction: LEFT_TO_RIGHT

2.4.1.17
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000201 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000746 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C008998 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108888 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
right: Zidovudine glucuronide
right: Uridine 5'-diphosphate
right: Hydrogen Ion
spontaneous: false
EC number: 2.4.1.17
left: Uridine diphosphate glucuronic acid
left: Zidovudine
name: Uridine diphosphate glucuronic acid + Zidovudine → Hydrogen Ion + Uridine 5'-diphosphate + Zidovudine glucuronide
conversion direction: LEFT_TO_RIGHT

Reference/PubChem-compound 159513
type: UnificationXref
id: 159513
db: PubChem-compound

Compound/PW C108890 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine monophosphate
stoichiometric coefficient: 1.0

Zidovudine 5'-Triphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Zidovudine 5'-Triphosphate

Endoplasmic Reticulum Membrane
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005789

Reference/UniProt Q9HAS3
type: UnificationXref
id: Q9HAS3
db: UniProt

Reference/BioCyc UDP
type: UnificationXref
id: UDP
db: BioCyc

Reference/CAS 30516-87-1
type: UnificationXref
id: 30516-87-1
db: CAS

Reference/ChemSpider 65158
type: UnificationXref
id: 65158
db: ChemSpider

Zidovudine
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Zidovudine

Unknown
type: Protein
entity reference: Unknown

Reference/HMDB HMDB0001341
type: UnificationXref
id: HMDB0001341
db: HMDB

Compound/PW C008998 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine
stoichiometric coefficient: 1.0

Zidovudine Action Action Pathway
type: Pathway
pathway order: PathwayTransport/2461018
pathway order: PathwayTransport/2461019
pathway order: PathwayTransport/2461025
pathway order: PathwayTransport/2461016
pathway order: PathwayTransport/2461017
pathway order: PathwayEnzymeReaction/2460756
pathway order: PathwayTransport/2461021
pathway order: PathwayTransport/2461022
pathway order: PathwayEnzymeReaction/2460754
pathway order: PathwayTransport/2461023
pathway order: PathwayEnzymeReaction/2460766
pathway order: PathwayTransport/2461024
pathway order: PathwayEnzymeReaction/2460752
pathway order: PathwayEnzymeReaction/2460753
pathway order: PathwayEnzymeReaction/2460750
pathway order: PathwayEnzymeReaction/2460751
pathway order: PathwayTransport/2461020
pathway order: PathwayEnzymeReaction/2460749
pathway order: PathwayEnzymeReaction/2460747
pathway order: PathwayEnzymeReaction/2460748
pathway order: PathwayInteraction/3147
pathway component: Transport10769
pathway component: Interaction3147
pathway component: ReactionCatalysis202450
pathway component: TransportCatalysis1944
pathway component: TransportCatalysis1943
pathway component: ReactionCatalysis202452
pathway component: TransportCatalysis1946
pathway component: Transport10763
pathway component: TransportCatalysis1945
pathway component: Reaction212820
pathway component: TransportCatalysis1931
pathway component: ReactionCatalysis202447
pathway component: Reaction212801
pathway component: ReactionCatalysis202448
pathway component: ReactionCatalysis202449
pathway component: 2.7.4.9
pathway component: ReactionCatalysis202443
pathway component: TransportCatalysis1936
pathway component: ReactionCatalysis202446
pathway component: TransportCatalysis1933
pathway component: TransportCatalysis1932
pathway component: ReactionCatalysis202441
pathway component: TransportCatalysis1935
pathway component: ReactionCatalysis202442
pathway component: TransportCatalysis1934
pathway component: ReactionCatalysis202460
pathway component: Reaction212804
pathway component: Reaction212806
pathway component: 2.4.1.17
xref: Reference/SMPDB SMP0122630
xref: Reference/PathWhiz PW123945
organism: Homo sapiens

Compound/PW C108887 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: 3'-Amino-3'-deoxythymidine
stoichiometric coefficient: 1.0

Reference/ChemSpider 5675
type: UnificationXref
id: 5675
db: ChemSpider

Reference/HMDB HMDB0000935
type: UnificationXref
id: HMDB0000935
db: HMDB

Thymidine kinase, cytosolic
type: ProteinReference
xref: Reference/UniProt P04183
organism: Homo sapiens

Solute carrier family 28 member 3
type: ProteinReference
xref: Reference/UniProt Q9HAS3

Reference/KEGG Compound C00167
type: UnificationXref
id: C00167
db: KEGG Compound

ChemicalStructure/PW C001034
type: ChemicalStructure
structure format: SMILES

Reference/UniProt P16662
type: UnificationXref
id: P16662
db: UniProt

Reference/PubChem-compound 108074
type: UnificationXref
id: 108074
db: PubChem-compound

Uridine 5'-diphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 17659
xref: Reference/PubChem-compound 6031
xref: Reference/CAS 58-98-0
xref: Reference/HMDB HMDB0000295
xref: Reference/KEGG Compound C00015
xref: Reference/ChemSpider 5809
xref: Reference/BioCyc UDP
chemical formula: C9H14N2O12P2
molecular weight: 404.0022
structure: ChemicalStructure/PW C000201

Cytoplasm
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005737

Thymidylate kinase
type: ProteinReference
xref: Reference/UniProt P23919
organism: Homo sapiens

Reference/ChEBI CHEBI 15422
type: UnificationXref
id: CHEBI:15422
db: ChEBI

Zidovudine
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Zidovudine

Homo sapiens
type: BioSource
xref: Reference/TAXONOMY 9606

Multidrug resistance-associated protein 5
type: ProteinReference
xref: Reference/UniProt O15440

Multidrug resistance protein 1
type: Protein
entity reference: Multidrug resistance protein 1

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

ReactionCatalysis202450
type: Catalysis
controller: Cytochrome P450 3A4
controlled: Reaction212806
control type: ACTIVATION

Compound/PW C001420 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

ReactionCatalysis202452
type: Catalysis
controller: UDP-glucuronosyltransferase 2B7
controlled: 2.4.1.17
control type: ACTIVATION

Multidrug resistance-associated protein 4
type: ProteinReference
xref: Reference/UniProt O15439

Water
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Water

Hydrogen Ion
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Hydrogen Ion

Reference/PubChem-compound 72187
type: UnificationXref
id: 72187
db: PubChem-compound

Cytochrome P450 2C9
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Cytochrome P450 2C9

Oxygen
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001377
xref: Reference/ChemSpider 952
xref: Reference/KEGG Compound C00007
xref: Reference/ChEBI CHEBI 15379
xref: Reference/PubChem-compound 977
xref: Reference/BioCyc CPD-6641
xref: Reference/CAS 7782-44-7
chemical formula: O2
molecular weight: 31.98983
structure: ChemicalStructure/PW C001065

Reference/GENE ONTOLOGY GO 0005789
type: UnificationXref
id: GO:0005789
db: GENE ONTOLOGY

Reference/KEGG Compound C00061
type: UnificationXref
id: C00061
db: KEGG Compound

Reference/UniProt P16435
type: UnificationXref
id: P16435
db: UniProt

ChemicalStructure/PW C108889
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C108888
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C108887
type: ChemicalStructure
structure format: SMILES

FMNH2
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 16048
xref: Reference/BioCyc FMNH2
xref: Reference/KEGG Compound C01847
xref: Reference/PubChem-compound 445395
xref: Reference/CAS 5666-16-0
xref: Reference/ChemSpider 393046
xref: Reference/HMDB HMDB0001142
chemical formula: C17H23N4O9P
molecular weight: 458.12027
structure: ChemicalStructure/PW C000891

Adenosine diphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Adenosine diphosphate

Reference/PubChem-compound 44229199
type: UnificationXref
id: 44229199
db: PubChem-compound

Reference/ChemSpider 16522
type: UnificationXref
id: 16522
db: ChemSpider

Reference/UniProt Q9Y694
type: UnificationXref
id: Q9Y694
db: UniProt

Reference/UniProt O00337
type: UnificationXref
id: O00337
db: UniProt

Adenosine triphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15422
xref: Reference/PubChem-compound 5957
xref: Reference/HMDB HMDB0000538
xref: Reference/CAS 56-65-5
xref: Reference/ChemSpider 5742
xref: Reference/BioCyc ATP
xref: Reference/KEGG Compound C00002
chemical formula: C10H16N5O13P3
molecular weight: 506.99576
structure: ChemicalStructure/PW C000414

ATP-binding cassette sub-family G member 2
type: ProteinReference
xref: Reference/UniProt Q9UNQ0

Reference/ChEBI CHEBI 16761
type: UnificationXref
id: CHEBI:16761
db: ChEBI

Reference/CAS 7782-44-7
type: UnificationXref
id: 7782-44-7
db: CAS

Reference/HMDB HMDB0001377
type: UnificationXref
id: HMDB0001377
db: HMDB

ChemicalStructure/PW C108891
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C108890
type: ChemicalStructure
structure format: SMILES

ReactionCatalysis202460
type: Catalysis
controller: Unknown
controlled: Reaction212820
control type: ACTIVATION

Compound/PW C000746 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Uridine diphosphate glucuronic acid
stoichiometric coefficient: 1.0

Reference/TAXONOMY 9606
type: UnificationXref
id: 9606
db: TAXONOMY

Zidovudine monophosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Zidovudine monophosphate

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

Transport10769
type: Transport
participant stoichiometry: Compound/PW C008998 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108890 Extracellular Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C108890 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C008998 Extracellular Space/Stoichiometry/1.0
right: Zidovudine
right: Zidovudine monophosphate
spontaneous: false
left: Zidovudine monophosphate
left: Zidovudine
name: Zidovudine (→), Zidovudine monophosphate (→) Transport: Homo sapiens, Cell, Cytoplasm to Homo sapiens, Cell, Extracellular Space
conversion direction: LEFT_TO_RIGHT

Reference/ChemSpider 5800
type: UnificationXref
id: 5800
db: ChemSpider

Reference/KEGG Compound C01847
type: UnificationXref
id: C01847
db: KEGG Compound

Reference/CAS 58-98-0
type: UnificationXref
id: 58-98-0
db: CAS

Solute carrier family 22 member 8
type: Protein
entity reference: Solute carrier family 22 member 8

Interaction3147
type: MolecularInteraction
interaction type: direct_interaction
name: Zidovudine 5'-Triphosphate inhibits Gag polyprotein
participant: Gag polyprotein
participant: Zidovudine 5'-Triphosphate

Reference/ChEBI CHEBI 10110
type: UnificationXref
id: CHEBI:10110
db: ChEBI

Compound/PW C001034 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine diphosphate
stoichiometric coefficient: 1.0

Compound/PW C040034 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Transport10763
type: Transport
participant stoichiometry: Compound/PW C008998 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C008998 Extracellular Space/Stoichiometry/1.0
right: Zidovudine
spontaneous: false
left: Zidovudine
name: Zidovudine (→) Transport: Homo sapiens, Extracellular Space to Homo sapiens, Cell, Cytoplasm
conversion direction: LEFT_TO_RIGHT

ChemicalStructure/PW C000891
type: ChemicalStructure
structure format: SMILES

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Compound/PW C000201 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Uridine 5'-diphosphate
stoichiometric coefficient: 1.0

ChemicalStructure/PW C001065
type: ChemicalStructure
structure format: SMILES
structure data: O=O

Solute carrier family 22 member 7
type: Protein
entity reference: Solute carrier family 22 member 7

Zidovudine
type: SmallMoleculeReference
xref: Reference/CAS 30516-87-1
xref: Reference/ChemSpider 32555
xref: Reference/KEGG Compound C07210
xref: Reference/HMDB HMDB0014638
xref: Reference/PubChem-compound 35370
xref: Reference/ChEBI CHEBI 10110
chemical formula: C10H13N5O4
molecular weight: 267.09674
structure: ChemicalStructure/PW C008998

Compound/PW C008998 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0001142
type: UnificationXref
id: HMDB0001142
db: HMDB

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

Reference/HMDB HMDB0000295
type: UnificationXref
id: HMDB0000295
db: HMDB

Sodium/nucleoside cotransporter 1
type: ProteinReference
xref: Reference/UniProt O00337

Reference/ChemSpider 5809
type: UnificationXref
id: 5809
db: ChemSpider

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/UniProt Q9NSA0
type: UnificationXref
id: Q9NSA0
db: UniProt

Reference/ChEBI CHEBI 15379
type: UnificationXref
id: CHEBI:15379
db: ChEBI

TransportCatalysis1931
type: Catalysis
controller: Solute carrier family 22 member 6
controlled: Transport10763
control type: ACTIVATION

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Zidovudine diphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Zidovudine diphosphate

Reference/UniProt P08684
type: UnificationXref
id: P08684
db: UniProt

Reference/CAS 58-64-0
type: UnificationXref
id: 58-64-0
db: CAS

ChemicalStructure/PW C000414
type: ChemicalStructure
structure format: SMILES

Unknown
type: ProteinReference

TransportCatalysis1936
type: Catalysis
controller: Solute carrier family 22 member 11
controlled: Transport10763
control type: ACTIVATION

Reference/PubChem-compound 5886
type: UnificationXref
id: 5886
db: PubChem-compound

TransportCatalysis1933
type: Catalysis
controller: Solute carrier family 28 member 3
controlled: Transport10763
control type: ACTIVATION

TransportCatalysis1932
type: Catalysis
controller: Sodium/nucleoside cotransporter 1
controlled: Transport10763
control type: ACTIVATION

Compound/PW C000414 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 1.0

TransportCatalysis1935
type: Catalysis
controller: Solute carrier family 22 member 8
controlled: Transport10763
control type: ACTIVATION

TransportCatalysis1934
type: Catalysis
controller: Solute carrier family 22 member 7
controlled: Transport10763
control type: ACTIVATION

Zidovudine
type: SmallMolecule
cellular location: Extracellular Space
entity reference: Zidovudine

Gag polyprotein
type: Protein
entity reference: Gag polyprotein

Reference/UniProt P15531
type: UnificationXref
id: P15531
db: UniProt

Compound/PW C108889/Stoichiometry/1.0
type: Stoichiometry
physical entity: 3'Amino-3'-deoxy-5'-glucopyranuronosylthymidine
stoichiometric coefficient: 1.0

UDP-glucuronosyltransferase 2B7
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: UDP-glucuronosyltransferase 2B7

Reference/UniProt P05181
type: UnificationXref
id: P05181
db: UniProt

Reference/UniProt P11509
type: UnificationXref
id: P11509
db: UniProt

FMNH2
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: FMNH2

TransportCatalysis1944
type: Catalysis
controller: ATP-binding cassette sub-family G member 2
controlled: Transport10769
control type: ACTIVATION

TransportCatalysis1943
type: Catalysis
controller: Multidrug resistance protein 1
controlled: Transport10769
control type: ACTIVATION

TransportCatalysis1946
type: Catalysis
controller: Multidrug resistance-associated protein 5
controlled: Transport10769
control type: ACTIVATION

ChemicalStructure/PW C000746
type: ChemicalStructure
structure format: SMILES

TransportCatalysis1945
type: Catalysis
controller: Multidrug resistance-associated protein 4
controlled: Transport10769
control type: ACTIVATION

Reference/BioCyc FMNH2
type: UnificationXref
id: FMNH2
db: BioCyc

Reference/PubChem-compound 22833512
type: UnificationXref
id: 22833512
db: PubChem-compound

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

Reference/ChemSpider 393046
type: UnificationXref
id: 393046
db: ChemSpider

Uridine 5'-diphosphate
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Uridine 5'-diphosphate

Reference/PubChem-compound 35370
type: UnificationXref
id: 35370
db: PubChem-compound

NADP
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: NADP

Compound/PW C108890 Extracellular Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: Zidovudine monophosphate
stoichiometric coefficient: 1.0

Reference/UniProt Q9UNQ0
type: UnificationXref
id: Q9UNQ0
db: UniProt

Reference/PubChem-compound 977
type: UnificationXref
id: 977
db: PubChem-compound

Reference/ChEBI CHEBI 17659
type: UnificationXref
id: CHEBI:17659
db: ChEBI

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

Multidrug resistance protein 1
type: ProteinReference
xref: Reference/UniProt P08183

ChemicalStructure/PW C040735
type: ChemicalStructure
structure format: SMILES

Nucleoside diphosphate kinase A
type: Complex
component stoichiometry: Protein/105 Cytoplasm/Stoichiometry/6.0
cellular location: Cytoplasm
component: Nucleoside diphosphate kinase A