PathWhiz ID | Pathway | Meta Data |
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PW000895View Pathway |
Amino Sugar and Nucleotide Sugar Metabolism IIIEscherichia coli
The synthesis of amino sugars and nucleotide sugars starts with the phosphorylation of N-Acetylmuramic acid (MurNac) through its transport from the periplasmic space to the cytoplasm. Once in the cytoplasm, MurNac and water undergo a reversible reaction catalyzed by N-acetylmuramic acid 6-phosphate etherase, producing a D-lactic acid and N-Acetyl-D-Glucosamine 6-phosphate. This latter compound can also be introduced into the cytoplasm through a phosphorylating PTS permase in the inner membrane that allows for the transport of N-Acetyl-D-glucosamine from the periplasmic space. N-Acetyl-D-Glucosamine 6-phosphate can also be obtained from chitin dependent reactions. Chitin is hydrated through a bifunctional chitinase to produce chitobiose. This in turn gets hydrated by a beta-hexosaminidase to produce N-acetyl-D-glucosamine. The latter undergoes an atp dependent phosphorylation leading to the production of N-Acetyl-D-Glucosamine 6-phosphate. N-Acetyl-D-Glucosamine 6-phosphate is then be deacetylated in order to produce Glucosamine 6-phosphate through a N-acetylglucosamine-6-phosphate deacetylase. This compound can either be isomerized or deaminated into Beta-D-fructofuranose 6-phosphate through a glucosamine-fructose-6-phosphate aminotransferase and a glucosamine-6-phosphate deaminase respectively.
Glucosamine 6-phosphate undergoes a reversible reaction to glucosamine 1 phosphate through a phosphoglucosamine mutase. This compound is then acetylated through a bifunctional protein glmU to produce a N-Acetyl glucosamine 1-phosphate.
N-Acetyl glucosamine 1-phosphate enters the nucleotide sugar synthesis by reacting with UTP and hydrogen ion through a bifunctional protein glmU releasing pyrophosphate and a Uridine diphosphate-N-acetylglucosamine.This compound can either be isomerized into a UDP-N-acetyl-D-mannosamine or undergo a reaction with phosphoenolpyruvic acid through UDP-N-acetylglucosamine 1-carboxyvinyltransferase releasing a phosphate and a UDP-N-Acetyl-alpha-D-glucosamine-enolpyruvate.
UDP-N-acetyl-D-mannosamine undergoes a NAD dependent dehydrogenation through a UDP-N-acetyl-D-mannosamine dehydrogenase, releasing NADH, a hydrogen ion and a UDP-N-Acetyl-alpha-D-mannosaminuronate, This compound is then used in the production of enterobacterial common antigens.
UDP-N-Acetyl-alpha-D-glucosamine-enolpyruvate is reduced through a NADPH dependent UDP-N-acetylenolpyruvoylglucosamine reductase, releasing a NADP and a UDP-N-acetyl-alpha-D-muramate. This compound is involved in the D-glutamine and D-glutamate metabolism.
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Creator: miguel ramirez Created On: May 12, 2015 at 11:53 Last Updated: May 12, 2015 at 11:53 |
PW064551View Pathway |
Amino Sugar MetabolismMus musculus
Amino sugars are sugar molecules containing an amine group. They make up many polysaccharides including, glycosaminoglycans or mucopolysaccharides.
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Creator: Carin Li Created On: January 16, 2018 at 11:11 Last Updated: January 16, 2018 at 11:11 |
PW088194View Pathway |
Amino Sugar MetabolismBos taurus
Amino sugars are sugar molecules containing an amine group. They make up many polysaccharides including, glycosaminoglycans or mucopolysaccharides.
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Creator: Ana Marcu Created On: August 10, 2018 at 10:56 Last Updated: August 10, 2018 at 10:56 |
PW088300View Pathway |
Amino Sugar MetabolismRattus norvegicus
Amino sugars are sugar molecules containing an amine group. They make up many polysaccharides including, glycosaminoglycans or mucopolysaccharides.
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Creator: Ana Marcu Created On: August 10, 2018 at 13:26 Last Updated: August 10, 2018 at 13:26 |
PW088393View Pathway |
Amino Sugar MetabolismDrosophila melanogaster
Amino sugars are sugar molecules containing an amine group. They make up many polysaccharides including, glycosaminoglycans or mucopolysaccharides.
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Creator: Ana Marcu Created On: August 10, 2018 at 15:40 Last Updated: August 10, 2018 at 15:40 |
PW000008View Pathway |
Amino Sugar MetabolismHomo sapiens
Amino sugars are sugar molecules containing an amine group. They make up many polysaccharides including, glycosaminoglycans or mucopolysaccharides.
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Creator: WishartLab Created On: August 01, 2013 at 13:54 Last Updated: August 01, 2013 at 13:54 |
PW176447View Pathway |
Aminobenzoic acid Predicted Metabolism PathwayHomo sapiens
Metabolites of Template4MB1 are predicted with biotransformer.
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Creator: Omolola Created On: December 12, 2023 at 13:20 Last Updated: December 12, 2023 at 13:20 |
PW000308View Pathway |
drug action
Aminocaproic Acid Action PathwayHomo sapiens
Aminocaproic acid, brand name Amicar, is a derivate of lysine and is an antifibrinolytic drug. Antifibrinolytics drugs are commonly used during major surgery to prevent significant blood loss. These drugs reversibly blocks the binding sites on plasminogen. This blockade inhibits plasminogen binding to fibrin and the conversion of plasminogen to plasmin. These prevents fibrin degradation and maintains the stability of fibrin clots.
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Creator: WishartLab Created On: August 22, 2013 at 10:45 Last Updated: August 22, 2013 at 10:45 |
PW124120View Pathway |
drug action
Aminocaproic Acid Drug Action Action Pathway (New)Homo sapiens
Aminocaproic acid (also known as ε-aminocaproic acid, ε-Ahx, or 6-aminohexanoic acid; brand name Amicar) is a derivative of lysine, meaning that it acts as an amino acid analogue and can alter functionality of enzymes that require lysine residue binding (e.g. amino acid transporters such as the SLC3A2/SLC7A6 proteins, fibrin, tissue-type plasminogen activator, apolipoprotein(a), aldehyde oxidase, etc.). After oral or intravenous administration, it reaches the bloodstream and can act at the site of vascular injury (or other cause of excess bleeding) where the coagulation (i.e. blood clotting) takes place. Aminocaproic acid is an antifibrinolytic drug. Antifibrinolytics drugs are commonly used during major surgery to prevent significant blood loss (e.g. a liver transplant). By reversibly blocking the binding sites on plasminogen, aminocaproic acid creates a ‘blockade’ in the process of fibrinolysis - this blockade inhibits plasminogen binding to fibrin and the conversion of plasminogen to plasmin (a proteolytic enzyme), preventing fibrin degradation to maintain the stability of fibrin mesh/clots formed through the coagulation cascade. Thus, it reduces clot breakdown and can treat acute bleeding due to elevated fibrinolysis. An orphan drug FDA-approved to prevent recurring hemorrhage in certain patients, aminocaproic acid is also used off-label to control bleeding in patients with immune or nonimmune severe thrombocytopenia (bleeding disorder due to low platelet count). Unlike many other antifibrinolytics, it has no serious side effects at therapeutic doses and there is no evidence that suggests an increased risk of thrombosis.
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Creator: Nitya Khetarpal Created On: August 26, 2020 at 15:53 Last Updated: August 26, 2020 at 15:53 |
PW144632View Pathway |
drug action
Aminocaproic acid Drug Metabolism Action PathwayHomo sapiens
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Creator: Ray Kruger Created On: October 07, 2023 at 14:04 Last Updated: October 07, 2023 at 14:04 |