PathWhiz ID | Pathway | Meta Data |
---|---|---|
PW012891View Pathway |
Anthocyanidin Sambubioside BiosynthesisArabidopsis thaliana
Anthocyanidin sambubioside biosynthesis is a pathway by which anthocyanins (plant pigments) become sambubiosides, diglucosides containing an attached xylose on the 2''-O-position of the 3-O-glucose moiety of anthocyanidins. First, anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase uses UDP to convert delphinidin 3-glucoside into delphinidin 3-sambubioside, cyanidin 3-glucoside into cyanidin 3-sambubioside, and pelargonidin 3-glucoside into pelargonidin-3-sambubioside. Second, the predicted enzyme anthocyanin 3-O-sambubioside 5-O-glucosyltransferase (coloured orange) is theorized to use UDP to convert cyanidin 3-sambubioside into cyanidin 3-sambubioside 5-glucoside and pelargonidin-3-sambubioside into pelargonidin 3-sambubioside-5-glucoside.
|
Creator: Carin Li Created On: February 22, 2017 at 15:10 Last Updated: February 22, 2017 at 15:10 |
PW124229View Pathway |
anthocyanin biosynthesisCitrus sinensis
Anthocyanin biosynthesis
|
Creator: Guest: Anonymous Created On: October 16, 2020 at 06:12 Last Updated: October 16, 2020 at 06:12 |
PW130854View Pathway |
Anthoxanthum odoratum Drug MetabolismHomo sapiens
|
Creator: Selena Created On: September 14, 2023 at 23:03 Last Updated: September 14, 2023 at 23:03 |
PW146273View Pathway |
drug action
Anthralin Drug Metabolism Action PathwayHomo sapiens
|
Creator: Ray Kruger Created On: October 07, 2023 at 17:50 Last Updated: October 07, 2023 at 17:50 |
PW128270View Pathway |
drug action
Anti-bacterial Gram-postive/Gram-negative TemplateStreptococcus pneumoniae (strain ATCC BAA-255 / R6)
|
Creator: Ray Kruger Created On: August 11, 2023 at 17:25 Last Updated: August 11, 2023 at 17:25 |
PW127041View Pathway |
disease
Anti-inflammatory pathwayHomo sapiens
As the bacteria are cleared, tryptophan levels continue to drop as the indole
dioxygenase (IDO) enzyme becomes more active. IDO activation results in the generation (from
tryptophan) of kynurenine (and its other metabolites) through a self-stimulating autocrine
process. Kynurenine binds to the arylhydrocarbon receptor (AhR) found in most immune cells
[5-7]. In addition to increased kynurenine production via IDO mediated synthesis,
hyopalbuminemia can also lead to the release of bound kynurenine (and other
immunosuppressive LysoPCs) into the bloodstream to fuel this kynurenine-mediated
immunosuppression process. Regardless of the source of kynurenine, the kynurenine-bound
AhR will migrate to the nucleus to bind to NF-kB which leads to more production of the IDO
enzyme, which leads to more production of kynureneine and more loss of tryptophan. High
kynurenine levels and low tryptophan levels leads to a shift in T-cell differentiation from a TH1
response (pro-inflammatory) to the production of Treg cells and an anti-inflammatory response
[5-7]. This often marks the beginning of the body’s return to normal and the impending end of
the bacterial infection. High kynurenine levels also lead to the production of more IL10R (the
interluekin-10 receptor) via binding of kynurenine to the arylhydrocarbon receptor (AhR).
Activated AhR effectively increases the anti-inflammatory response from interleukin 10 (an
anti-inflammatory cytokine). Low tryptophan levels also lead to the activation of the general
control non-depressible 2 kinase (GCN2K) pathway, which inhibits the mammalian target of
rapamycin (mTOR), and protein kinase C signaling. This leads to T cell autophagy and anergy.
High levels of kynurenine also lead to the inhibition of T cell proliferation through induction of T
cell apoptosis [5-7].
After bacterial clearance, the anti-inflammatory pathway is further activated and the
pro-inflammatory process further deactivated. With the bacteria cleared, the production of
pro-inflammatory cytokines are reduced due to lack of activity from TLR4 and other TLR
stimulation. Additionally, anti-inflammatory cytokines (IL-10 and IL-4) are induced leading to a
shift in the T-cells from a pro-inflammatory TH1 response to an anti-inflammatory Treg
response. Likewise, with this T-cell shift, levels of cortisol and epinephrine drop, as do levels of
glucose and NO. Blood pressure begins to rise to normal. Kynurenine levels fall due to
continued kynurenine metabolism and uptake by serum albumin. More tryptophan is released
or produced to arrest the IDO synthesis (which reduces kynurenine levels) which further
reduces activation of the arylhydrocarbon receptor (AhR) which leads to the de-activation of
the NF-κB pathway, which leads to lower levels of pro-inflammatory cytokines. Itaconate,
accumulated by pro-inflammatory B-cells and T-cells, promotes the post-transcriptional
modification of KEAP1, which induces the expression of the antioxidant response and PPARγ.
PPARγ inhibits the NF-κB pathway and induces the expression of anti-inflammatory genes while
at the same time increasing fatty-acid β-oxidation and glutaminolysis. Glutamine and fatty acids
fuel the TCA cycle to support oxidative-phosphorylation. Aerobic glycolysis stops. The
accumulated lactate and α-Ketoglutarate promote cysteine modifications that induce the
expression of anti-inflammatory genes. Lactate levels in the blood drop as do glucose levels.
Macrophages and other T-cells and B-cells begin to die or apoptose, the number of white blood
cells drops and the body returns to normal.
|
Creator: Karxena Harford Created On: July 13, 2022 at 00:12 Last Updated: July 13, 2022 at 00:12 |
PW128446View Pathway |
drug action
Antihemophilic Factor Human Action PathwayHomo sapiens
Antihemophilic factor human, also known as Hemofil, Koate, and Wilate is used as factor VIII replacement therapy to treat hemophilia A. It is a non-recombinant concentrate of the endogenous coagulation factor VIII, produced by reducing von Willebrand Factor antigen and purified by affinity chromatography. Hemophilia A is caused by mutations in the coagulation factor VIII gene that leads to functional deficiency and or complete loss of the coagulation factor. These mutations lead to bleeding and being able to bruise easily, exogenous replacement of coagulation factor VIII in order to counteract the deficiencies. Administered intravenously the antihemophilic factor human replaces the abnormal coagulation factor VIII, acting as a cofactor to activate coagulation factor IX and X.
|
Creator: Selena Created On: August 29, 2023 at 09:34 Last Updated: August 29, 2023 at 09:34 |
PW128378View Pathway |
drug action
Antihemophilic Factor Human Recombinant Action PathwayHomo sapiens
Antihemophilic factor, human recombinant of the coagulation Factor VIII, also known as Advate, Adynovate, Helixate, Kogenate, Kovaltry, Novoeight, Recombinate, to treat hemophilia A, von Willebrand disease and Factor XIII deficiency. Antihemophilic factor, human recombinant is administered intravenously and acts to correct coagulation defects, by activating coagulation factor X and IX.
|
Creator: Selena Created On: August 25, 2023 at 07:53 Last Updated: August 25, 2023 at 07:53 |
PW000669View Pathway |
drug action
Antipyrine Action PathwayHomo sapiens
Antipyrine (also named Fenazone or Phenazone) is often used for testing the effect of other drugs on drug-metabolizing enzymes in the liver. Antipyrine can block prostaglandin synthesis by the action of inhibition of prostaglandin G/H synthase 1 and 2. Prostaglandin G/H synthase 1 and 2 catalyze the arachidonic acid to prostaglandin G2, and also catalyze prostaglandin G2 to prostaglandin H2 in the metabolism pathway. Decreased prostaglandin synthesis in many animal model's cell is caused by presence of antipyrine.
|
Creator: WishartLab Created On: April 26, 2014 at 11:27 Last Updated: April 26, 2014 at 11:27 |
PW145433View Pathway |
drug action
Antipyrine Drug Metabolism Action PathwayHomo sapiens
|
Creator: Ray Kruger Created On: October 07, 2023 at 15:49 Last Updated: October 07, 2023 at 15:49 |