PathWhiz ID | Pathway | Meta Data |
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PW127541View Pathway |
drug action
Remdesivir Action PathwayHomo sapiens
Remdesivir is a nucleoside analog used to treat RNA virus infections, including COVID-19, a disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Remdesivir was granted FDA emergency use Authorization on May 1, 2020, for use in adults and children with suspected or confirmed COVID-19 infection requiring hospitalization. It was fully approved by the FDA on October 22, 2020 for the treatment of COVID-19. The mechanism of the drug were found to be identical between SARS-CoV, SARS-CoV-2, and MERS-CoV.
Severe acute respiratory syndrome conronavirus 2 (SARS-CoV-2) is the causative agent of COVID-19, and is a respiratory disease that is capable of progressing to viral pneumonia and acute respiratory distress syndrome (ARDS). COVID-19 can be fatal. Like other RNA viruses, SARS-CoV-2 depends on RNA-dependent RNA polymerase (RdRp) for genomic replication. Due to the much higher selectivity of mammalian DNA and RNA polymerases for ATP over remdesivir triphosphate, remdesivir is not a significant inhibitor of these mammalian enzymes. Remdesivir does, however, carry the risks for hypersensitivity reactions, including anaphylaxis, elevated transaminase levels and potential decreased efficacy when combined with hydroxychloroquine or chloroquine.
SARS-CoV-2 lipoviroparticles enter target hepatocytes via receptor-mediated endocytosis. Viral RNA is released from the mature SARS-CoV-2 virion and translated at the endoplasmic reticulum. SARS-CoV-2 RNA is translated into Replicase polypotein 1ab by host ribosomes. Replicase Protein 1ab is cleaved by SARS-CoV-2 3C-like proteinase nsp5 and Papain-like protease nsp3 into various proteins required for RNA replication, mature virus synthesis, and the enzymes required for the cleavage of the polyprotein. These proteins include host translation inhibitor nsp1, non-structural protein 2, papain-like protease nsp3, non-structural protein 4, 3C-like proteinase nsp5, non-structural protein 6, non-structural protein 7, non-structural protein 8, RNA-capping enzyme subunit nsp9, non-structural protein 10, RNA-directed RNA polymerase nsp12, helicase nsp13, guanine-N7 methyltransferase nsp14, uridylate-specific endoribonuclease nsp15, and 2'-O-methyltransferase nsp16. SARS-CoV-2 RNA that was released from the virus is normally replicated by RNA polymerase which is comprised of nsp7, nsp8, and nsp12.
Remdesivir is a phosphoramidite produg of a 1'-cyano-substituted adenosine nucleoside analogue that competes with ATP for incorporation into newly synthesized viral RNA by the RdRp complex. Remdesivir is cleaved to a monophosphate form through the actions of either carboxylesterase 1 or cathepsin A enzymes. Remdesivir nucleoside monophosphate is then phosphylated by undescribed kinases to remdesivir nucleoside triphosphate. Remdesivir Nucleoside Triphosphate inhibits RNA polymerase, by competing with ATP for incorporation into newly synthesized viral RNA. This prevents RNA replication from occurring. Because RNA replication does not occur, mature, infective viruses are unable to be assembled and released.
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Creator: Ray Kruger Created On: April 18, 2023 at 09:08 Last Updated: April 18, 2023 at 09:08 |
PW146889View Pathway |
drug action
Remdesivir Drug Metabolism Action PathwayHomo sapiens
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Creator: Ray Kruger Created On: October 07, 2023 at 19:17 Last Updated: October 07, 2023 at 19:17 |
PW176229View Pathway |
Remdesivir Predicted Metabolism PathwayHomo sapiens
Metabolites of Remdesivir are predicted with biotransformer.
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Creator: Omolola Created On: December 04, 2023 at 12:57 Last Updated: December 04, 2023 at 12:57 |
PW000422View Pathway |
drug action
Remifentanil Action PathwayHomo sapiens
Remifentanil is a pharmacologically-active, synthetic, small molecule derived from fentanyl and belongs to a class of drugs called opioids. Opioids are therapeutically employed to achieve analgesia. Remifentanial’s rapid mechanism of action primarily involves its agonistic effects on mu-type opioid receptors which are inhibitory G-coupled protein receptors and lead to the inhibition of adenylate cyclase and decrease in cAMP production. Analgesia, anesthesia, and respiratory depression are a function of remifentanial’s action on these mu-type opioid receptors.
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Creator: WishartLab Created On: August 22, 2013 at 10:46 Last Updated: August 22, 2013 at 10:46 |
PW145001View Pathway |
drug action
Remifentanil Drug Metabolism Action PathwayHomo sapiens
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Creator: Ray Kruger Created On: October 07, 2023 at 14:54 Last Updated: October 07, 2023 at 14:54 |
PW128433View Pathway |
drug action
Remifentanil Opioid Analgesic Action PathwayHomo sapiens
Remifentanil is a potent ultra short-acting synthetic opioid given to patients during surgery for pain relief and adjunctive to an anaesthetic. Remifentanil is a specific mu-type-opioid receptor agonist which means it reduces sympathetic nervous system tone, and causes respiratory depression and analgesia.
Remifentanil binds to mu opioid receptors, stimulating the exchange of GTP for GDP on the G-protein complex. As the effector system is adenylate cyclase and cAMP located at the inner surface of the plasma membrane, opioids decrease intracellular cAMP by inhibiting adenylate cyclase. Subsequently, the release of nociceptive neurotransmitters such as GABA is inhibited. Opioids close N-type voltage-operated calcium channels and open calcium-dependent inwardly rectifying potassium channels. This results in hyperpolarization and reduced neuronal excitability. Remifentanil acts at A delta and C pain fibres in the dorsal horn of the spinal cord. By decreasing neurotransmitter action there is less pain transmittance into the spinal cord. This leads to less pain perception.
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Creator: Ray Kruger Created On: August 28, 2023 at 17:44 Last Updated: August 28, 2023 at 17:44 |
PW126554View Pathway |
drug action
Remifentanil Opioid Anasthetic Action PathwayHomo sapiens
Remifentanil is a potent ultra short-acting synthetic opioid given to patients during surgery for pain relief and adjunctive to an anaesthetic. Remifentanil is a specific mu-type-opioid receptor agonist which acts in the brain, spinal cord, and peripherally. This means it reduces sympathetic nervous system tone, and causes respiratory depression and analgesia.
Remifentanil binds to mu opioid receptors, stimulating the exchange of GTP for GDP on the G-protein complex. As the effector system is adenylate cyclase and cAMP located at the inner surface of the plasma membrane, opioids decrease intracellular cAMP by inhibiting adenylate cyclase. Subsequently, the release of nociceptive neurotransmitters such as GABA is inhibited. Opioids close N-type voltage-operated calcium channels and open calcium-dependent inwardly rectifying potassium channels. This results in hyperpolarization and reduced neuronal excitability. This leads to less activity in the brain which causes an anesthetic effect.
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Creator: Karxena Harford Created On: January 10, 2022 at 01:30 Last Updated: January 10, 2022 at 01:30 |
PW176288View Pathway |
Remifentanil Predicted Metabolism PathwayHomo sapiens
Metabolites of Remifentanil are predicted with biotransformer.
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Creator: Omolola Created On: December 04, 2023 at 14:42 Last Updated: December 04, 2023 at 14:42 |
PW127727View Pathway |
drug action
Remimazolam Action PathwayHomo sapiens
Remimazolam is an ultra short-acting benzodiazepine used for the induction and maintenence of procedural sedation during short procedures. Recent trends in anesthesia-related drug development have touted the benefits of so-called "soft drugs" - these agents, such as remifentanil, are designed to be metabolically fragile and thus susceptible to rapid biotransformation and elimination as inactive metabolites. These "soft drugs" are useful in the context of surgical procedures, wherein a rapid onset/offset is desirable, enabling anesthesiologists to manipulate drug concentrations as needed. Remimazolam was the first "soft" benzodiazepine analog to be developed and was approved for use by the FDA in July 2020 under the brand name Byfavo. Like other benzodiazepines, remimazolam exerts its therapeutic effects by potentiating the effect of gamma-aminobutyric acid (GABA) on GABA(A) receptors, the main inhibitory neurotransmitter receptors in the mammalian brain. GABA(A) receptors are a component of GABA-gated ionotropic chloride channels that produce inhibitory postsynaptic potentials - following activation by GABA, the channel undergoes a conformational change that allows the passage of chloride ions through the channel. The inhibitory potentials produced by GABA neurotransmission play an integral role in the suppression and control of epileptiform nerve firing such as that seen in epilepsy, which makes the GABA system a desirable target in the treatment of epilepsy. Benzodiazepines are positive allosteric modulators of GABA(A) function. They bind to the interface between alpha (α) and gamma (γ) subunits on the receptor, commonly referred to as the benzodiazepine binding site, and modulate the receptor such that its inhibitory response to GABA binding is dramatically increased. Some side effects of using remimazolam may include drowsiness, dizziness, lightheadedness, and confusion.
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Creator: Hayley Created On: May 26, 2023 at 14:39 Last Updated: May 26, 2023 at 14:39 |
PW146524View Pathway |
drug action
Remimazolam Drug Metabolism Action PathwayHomo sapiens
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Creator: Ray Kruger Created On: October 07, 2023 at 18:25 Last Updated: October 07, 2023 at 18:25 |