PathWhiz ID | Pathway | Meta Data |
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PW144343View Pathway |
drug action
Pantoprazole Drug Metabolism Action PathwayHomo sapiens
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Creator: Ray Kruger Created On: October 07, 2023 at 13:26 Last Updated: October 07, 2023 at 13:26 |
PW000591View Pathway |
Pantoprazole Metabolism PathwayHomo sapiens
Pantoprazole is a proton pump inhibitor (PPI) class drug that suppresses the final step in gastric acid production. In this pathway, pantoprazole is oxidized in the stomach to form the active metabolite of pantoprazole. This active metabolite then binds covalently to the potassium-transporting ATPase protein subunits, found at the secretory surface of the gastric parietal cell, preventing any stimulus. Because the drug binds covalently, its effects are dose-dependent and last much longer than similar drugs that bind to the protein non-covalently. This is because additional ATPase enzymes must be created to replace the ones covalently bound by pantoprazole.
Pantoprazole is used to manage gastroesophageal reflux disease, to prevent stomach ulcers, and can be used to help treat the effects of a H. pylori infection.
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Creator: WishartLab Created On: September 11, 2013 at 22:33 Last Updated: September 11, 2013 at 22:33 |
PW122604View Pathway |
Pantothenate and CoA BiosynthesisPseudomonas aeruginosa
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Ana Marcu Created On: August 12, 2019 at 18:22 Last Updated: August 12, 2019 at 18:22 |
PW357771View Pathway |
Pantothenate and CoA BiosynthesisEscherichia coli O127:H6 str. E2348/69
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: November 12, 2024 at 19:45 Last Updated: November 12, 2024 at 19:45 |
PW357769View Pathway |
Pantothenate and CoA BiosynthesisEscherichia coli str. K-12 substr. DH10B
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: November 12, 2024 at 19:43 Last Updated: November 12, 2024 at 19:43 |
PW357764View Pathway |
Pantothenate and CoA BiosynthesisEscherichia coli 536
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: November 12, 2024 at 19:40 Last Updated: November 12, 2024 at 19:40 |
PW323993View Pathway |
Pantothenate and CoA BiosynthesisAlistipes putredinis DSM 17216
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: October 11, 2024 at 01:26 Last Updated: October 11, 2024 at 01:26 |
PW323981View Pathway |
Pantothenate and CoA BiosynthesisAlistipes indistinctus YIT 12060
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: October 11, 2024 at 01:17 Last Updated: October 11, 2024 at 01:17 |
PW324547View Pathway |
Pantothenate and CoA BiosynthesisHafnia alvei ATCC 51873
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: October 11, 2024 at 10:56 Last Updated: October 11, 2024 at 10:56 |
PW357783View Pathway |
Pantothenate and CoA BiosynthesisEscherichia coli O55:H7 str. CB9615
The CoA biosynthesis requires compounds from two other pathways: aspartate metabolism and valine biosynthesis. It requires a Beta-Alanine and R-pantoate. The compound (R)-pantoate is generated in two reactions, as shown by the interaction of alpha-ketoisovaleric acid, 5,10 methylene-THF and water through a 3-methyl-2-oxobutanoate hydroxymethyltransferase resulting in a tetrahydrofolic acid and a 2-dehydropantoate. 2-dehydropantoate interacts with hydrogen through a NADPH driven acetohydroxy acid isomeroreductase resulting in the release of NADP and R-pantoate. On the other hand L-aspartic acid interacts with a hydrogen ion and gets decarboxylated through an Aspartate 1- decarboxylase resulting in a carbon dioxide and a Beta-alanine. Beta-alanine and R-pantoate interact with an ATP driven pantothenate synthetase resulting in pyrophosphate, AMP, hydrogen ion and pantothenic acid. Pantothenic acid is phosphorylated through a ATP-driven pantothenate kinase resulting in a ADP, a hydrogen ion and D-4'-Phosphopantothenate. The latter interacts with a CTP and a L-cysteine resulting in a fused 4'phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in a hydrogen ion, a pyrophosphate, a CMP and 4-phosphopantothenoylcysteine. The latter compound interacts with a hydrogen ion through a fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase resulting in the release of carbon dioxide and 4-phosphopantetheine. 4-phosphopantetheine reacts with ATP, hydrogen ion and an phosphopantetheine adenylyltransferase resulting in a release of pyrophosphate, and dephospho-CoA. Dephospho-CoA reacts with an ATP driven dephospho-CoA kinase resulting in a ADP , a hydrogen ion and a Coenzyme A. Dephospho-CoA also reacts with 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (citG) to form both adenine and 2'-(5-Triphosphoribosyl)-3'-dephospho-CoA. In this pathway, all enzymes are essential for the cell growth. Biosynthetic pathway for producing CoA is same for most organisms (with exception of differences in the functionality of involved enzymes). In plants, every step is catalyzed by monofunctional enzymes instead of biofunctional enzymes.
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Creator: Julia Wakoli Created On: November 12, 2024 at 19:54 Last Updated: November 12, 2024 at 19:54 |