SMP0536172
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Benzoate degradation (catBCIJFD Operon activation)
Butyricimonas synergistica DSM 23225
Matched Description: and catD). It is regulated by two genes outside of the operon - CatM and an adjacent gene, benM … , which encode LysR-type transcriptional regulators that can act both as activators and repressors of the … -lactone, catI and catJ encode 3-oxoadipate CoA-transferase subunit A and 3-oxoadipate CoA … -transferase subunit B, which catalyze conversion of beta-ketoadipate to beta-ketoadipyl-CoA and lastly … , catF encodes Beta-ketoadipyl-CoA thiolase, which converts beta-ketoadipyl-CoA into Succinyl-CoA and Acetyl-CoA which can then enter the TCA cycle.
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SMP0536379
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Benzoate degradation (catBCIJFD Operon activation)
Bacteroides dorei DSM 17855
Matched Description: and catD). It is regulated by two genes outside of the operon - CatM and an adjacent gene, benM … , which encode LysR-type transcriptional regulators that can act both as activators and repressors of the … -lactone, catI and catJ encode 3-oxoadipate CoA-transferase subunit A and 3-oxoadipate CoA … -transferase subunit B, which catalyze conversion of beta-ketoadipate to beta-ketoadipyl-CoA and lastly … , catF encodes Beta-ketoadipyl-CoA thiolase, which converts beta-ketoadipyl-CoA into Succinyl-CoA and Acetyl-CoA which can then enter the TCA cycle.
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SMP0536631
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Benzoate degradation (catBCIJFD Operon activation)
Desulfovibrio piger ATCC 29098
Matched Description: and catD). It is regulated by two genes outside of the operon - CatM and an adjacent gene, benM … , which encode LysR-type transcriptional regulators that can act both as activators and repressors of the … -lactone, catI and catJ encode 3-oxoadipate CoA-transferase subunit A and 3-oxoadipate CoA … -transferase subunit B, which catalyze conversion of beta-ketoadipate to beta-ketoadipyl-CoA and lastly … , catF encodes Beta-ketoadipyl-CoA thiolase, which converts beta-ketoadipyl-CoA into Succinyl-CoA and Acetyl-CoA which can then enter the TCA cycle.
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SMP0536892
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Benzoate degradation (catBCIJFD Operon activation)
Roseburia inulinivorans DSM 16841
Matched Description: and catD). It is regulated by two genes outside of the operon - CatM and an adjacent gene, benM … , which encode LysR-type transcriptional regulators that can act both as activators and repressors of the … -lactone, catI and catJ encode 3-oxoadipate CoA-transferase subunit A and 3-oxoadipate CoA … -transferase subunit B, which catalyze conversion of beta-ketoadipate to beta-ketoadipyl-CoA and lastly … , catF encodes Beta-ketoadipyl-CoA thiolase, which converts beta-ketoadipyl-CoA into Succinyl-CoA and Acetyl-CoA which can then enter the TCA cycle.
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SMP0536946
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Benzoate degradation (catBCIJFD Operon activation)
Veillonella dispar ATCC 17748
Matched Description: and catD). It is regulated by two genes outside of the operon - CatM and an adjacent gene, benM … , which encode LysR-type transcriptional regulators that can act both as activators and repressors of the … -lactone, catI and catJ encode 3-oxoadipate CoA-transferase subunit A and 3-oxoadipate CoA … -transferase subunit B, which catalyze conversion of beta-ketoadipate to beta-ketoadipyl-CoA and lastly … , catF encodes Beta-ketoadipyl-CoA thiolase, which converts beta-ketoadipyl-CoA into Succinyl-CoA and Acetyl-CoA which can then enter the TCA cycle.
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SMP0658807
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Quorum sensing - Autoinducer-2 Biosynthesis
Pseudomonas aeruginosa
Matched Description: Bacterial Autoinducer-2 (AI-2) and its precursor, 4,5-dihydroxy-2,3-pentanedione (DPD), mediate the … , which is found in both E. coli and S. typhimurium. In E. coli and most pathogenic bacteria, DPD … -dihydroxydihydrofuran-3-one and hydration to the final autoinducer, (2R,4S)-2-methyl-2,3,3,4 … level of AI-2 increases, other cells detect it and import it through the autoinducer-2 ABC … -HPD. Finally, the acetyl group of P-HPD is transferred to coenzyme A, and dihydroxyacetone
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SMP0455781
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Secondary Metabolites: Glyoxylate Cycle
Escherichia coli SE15
Matched Description: The glyoxylate cycle starts with the interaction of Acetyl-Coa with a water molecule and Oxalacetic … acid interact through a Citrate synthase resulting in a release of a coenzyme a and citric acid … molecule and cis-Aconitic acid. The cis-Aconitic acid is then hydrated in an reversible reaction through … reversible reaction through isocitrate lyase resulting in the release of a succinic acid and a glyoxylic … acid. The glyoxylic acid then reacts in a reversible reaction with an acetyl-coa, and a water
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SMP0457999
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Secondary Metabolites: Glyoxylate Cycle
Escherichia coli DH1
Matched Description: The glyoxylate cycle starts with the interaction of Acetyl-Coa with a water molecule and Oxalacetic … acid interact through a Citrate synthase resulting in a release of a coenzyme a and citric acid … molecule and cis-Aconitic acid. The cis-Aconitic acid is then hydrated in an reversible reaction through … reversible reaction through isocitrate lyase resulting in the release of a succinic acid and a glyoxylic … acid. The glyoxylic acid then reacts in a reversible reaction with an acetyl-coa, and a water
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SMP0396795
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Isoleucine Biosynthesis
Methylococcus capsulatus
Matched Description: -threonine interacts with threonine dehydratase biosynthetic releasing water, a hydrogen ion and (2Z)-2 … -aminobut-2-enoate. The latter is isomerized into a 2-iminobutanoate which interacts with water and a … hydrogen ion spontaneously, resulting in the release of ammonium and 2-ketobutyric acid. 2-ketobutyric … acid reacts with pyruvic acid and hydrogen ions through an acetohydroxybutanoate synthase … / acetolactate synthase 2 resulting in carbon dioxide and (S)-2-Aceto-2-hydroxybutanoic acid. (S)-2-Aceto-2
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SMP0644525
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Isoleucine Biosynthesis
Escherichia coli (strain 55989 / EAEC)
Matched Description: -threonine interacts with threonine dehydratase biosynthetic releasing water, a hydrogen ion and (2Z)-2 … -aminobut-2-enoate. The latter is isomerized into a 2-iminobutanoate which interacts with water and a … hydrogen ion spontaneously, resulting in the release of ammonium and 2-ketobutyric acid. 2-ketobutyric … acid reacts with pyruvic acid and hydrogen ions through an acetohydroxybutanoate synthase … / acetolactate synthase 2 resulting in carbon dioxide and (S)-2-Aceto-2-hydroxybutanoic acid. (S)-2-Aceto-2
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