Reference/ChEBI CHEBI 16015
type: UnificationXref
id: CHEBI:16015
db: ChEBI

Compound/PW C001178/Stoichiometry/1.0
type: Stoichiometry
physical entity: 5,10-Methylene-THF
stoichiometric coefficient: 1.0

Reference/PubChem-compound 6022
type: UnificationXref
id: 6022
db: PubChem-compound

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Reference/PubChem-compound 439153
type: UnificationXref
id: 439153
db: PubChem-compound

Reference/BioCyc 10-FORMYL-THF
type: UnificationXref
id: 10-FORMYL-THF
db: BioCyc

Reference/ChemSpider 50
type: UnificationXref
id: 50
db: ChemSpider

Compound/PW C040034/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 20506
type: UnificationXref
id: CHEBI:20506
db: ChEBI

Reference/ChEBI CHEBI 17115
type: UnificationXref
id: CHEBI:17115
db: ChEBI

Reference/CAS 7444-29-3
type: UnificationXref
id: 7444-29-3
db: CAS

Reference/UniProt Q8RXU4
type: UnificationXref
id: Q8RXU4
db: UniProt

NAD
type: SmallMolecule
entity reference: NAD

Compound/PW C001214/Stoichiometry/1.0
type: Stoichiometry
physical entity: DL-O-Phosphoserine
stoichiometric coefficient: 1.0

Reference/BioCyc ATP
type: UnificationXref
id: ATP
db: BioCyc

Reference/KEGG Compound C00445
type: UnificationXref
id: C00445
db: KEGG Compound

Ammonium
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0041827
xref: Reference/CAS 14798-03-9
xref: Reference/PubChem-compound 16741146
xref: Reference/KEGG Compound C01342
xref: Reference/ChEBI CHEBI 28938
xref: Reference/ChemSpider 218
chemical formula: H4N
molecular weight: 18.034374
structure: ChemicalStructure/PW C022608

Compound/PW C000095/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamic acid
stoichiometric coefficient: 1.0

Reference/ChemSpider 18714427
type: UnificationXref
id: 18714427
db: ChemSpider

Reference/PubChem-compound 6288
type: UnificationXref
id: 6288
db: PubChem-compound

Compound/PW C001034/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine diphosphate
stoichiometric coefficient: 1.0

threonine aldolase 2
type: Protein
entity reference: threonine aldolase 2

Reference/ChemSpider 5742
type: UnificationXref
id: 5742
db: ChemSpider

Reference/CAS 17885-08-4
type: UnificationXref
id: 17885-08-4
db: CAS

Reference/ChEBI CHEBI 16474
type: UnificationXref
id: CHEBI:16474
db: ChEBI

Reference/PubChem-compound 439175
type: UnificationXref
id: 439175
db: PubChem-compound

Reference/ChemSpider 5736
type: UnificationXref
id: 5736
db: ChemSpider

Phosphohydroxypyruvic acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001024
xref: Reference/PubChem-compound 105
xref: Reference/ChemSpider 103
xref: Reference/CAS 3913-50-6
xref: Reference/ChEBI CHEBI 30933
xref: Reference/KEGG Compound C03232
xref: Reference/BioCyc 3-P-HYDROXYPYRUVATE
chemical formula: C3H5O7P
molecular weight: 183.9773
structure: ChemicalStructure/PW C000810

Reference/ChemSpider 5735
type: UnificationXref
id: 5735
db: ChemSpider

Reference/BioCyc METHYLENE-THF
type: UnificationXref
id: METHYLENE-THF
db: BioCyc

Reference/ChemSpider 704
type: UnificationXref
id: 704
db: ChemSpider

Reference/BioCyc L-ALLO-THREONINE
type: UnificationXref
id: L-ALLO-THREONINE
db: BioCyc

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Reference/KEGG Compound C00101
type: UnificationXref
id: C00101
db: KEGG Compound

Reference/UniProt Q9LM59
type: UnificationXref
id: Q9LM59
db: UniProt

Compound/PW C000092/Stoichiometry/1.0
type: Stoichiometry
physical entity: Formic acid
stoichiometric coefficient: 1.0

Compound/PW C000146/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 1.0

Ammonium
type: SmallMolecule
entity reference: Ammonium

Reference/CAS 3913-50-6
type: UnificationXref
id: 3913-50-6
db: CAS

Hydrogen Ion
type: SmallMolecule
entity reference: Hydrogen Ion

D-3-phosphoglycerate dehydrogenase 2, chloroplastic
type: Protein
entity reference: D-3-phosphoglycerate dehydrogenase 2, chloroplastic

10-Formyltetrahydrofolate
type: SmallMolecule
entity reference: 10-Formyltetrahydrofolate

Cytosol
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005829

Bifunctional protein FolD 1, mitochondrial
type: Protein
entity reference: Bifunctional protein FolD 1, mitochondrial

Probable low-specificity L-threonine aldolase 1
type: Protein
entity reference: Probable low-specificity L-threonine aldolase 1

Reference/KEGG Compound C00234
type: UnificationXref
id: C00234
db: KEGG Compound

Serine--glyoxylate aminotransferase
type: Protein
entity reference: Serine--glyoxylate aminotransferase

Reference/KEGG Compound C00597
type: UnificationXref
id: C00597
db: KEGG Compound

Adenosine triphosphate
type: SmallMolecule
entity reference: Adenosine triphosphate

Phosphoserine phosphatase, chloroplastic
type: Protein
entity reference: Phosphoserine phosphatase, chloroplastic

Reference/PubChem-compound 122347
type: UnificationXref
id: 122347
db: PubChem-compound

Reference/KEGG Compound C00009
type: UnificationXref
id: C00009
db: KEGG Compound

Reference/KEGG Compound C00008
type: UnificationXref
id: C00008
db: KEGG Compound

Reference/KEGG Compound C00006
type: UnificationXref
id: C00006
db: KEGG Compound

Serine hydroxymethyltransferase 7
type: Protein
entity reference: Serine hydroxymethyltransferase 7

Serine hydroxymethyltransferase 6
type: Protein
entity reference: Serine hydroxymethyltransferase 6

Reference/ChEBI CHEBI 18009
type: UnificationXref
id: CHEBI:18009
db: ChEBI

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Reference/BioCyc L-ALPHA-ALANINE
type: UnificationXref
id: L-ALPHA-ALANINE
db: BioCyc

3-Phosphoglyceric acid
type: SmallMolecule
entity reference: 3-Phosphoglyceric acid

ChemicalStructure/PW C000810
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)C(=O)COP(O)(O)=O

Phosphoserine aminotransferase 1, chloroplastic
type: Protein
entity reference: Phosphoserine aminotransferase 1, chloroplastic

Reference/CAS 56-41-7
type: UnificationXref
id: 56-41-7
db: CAS

Reference/KEGG Compound C00005
type: UnificationXref
id: C00005
db: KEGG Compound

Reference/ChEBI CHEBI 18367
type: UnificationXref
id: CHEBI:18367
db: ChEBI

Reference/KEGG Compound C00004
type: UnificationXref
id: C00004
db: KEGG Compound

Reference/CAS 135-16-0
type: UnificationXref
id: 135-16-0
db: CAS

Reference/ChemSpider 1032
type: UnificationXref
id: 1032
db: ChemSpider

Reference/KEGG Compound C00003
type: UnificationXref
id: C00003
db: KEGG Compound

Reference/ChemSpider 388320
type: UnificationXref
id: 388320
db: ChemSpider

Reference/KEGG Compound C00002
type: UnificationXref
id: C00002
db: KEGG Compound

Reference/ChemSpider 1031
type: UnificationXref
id: 1031
db: ChemSpider

Aminomethyltransferase, mitochondrial
type: Protein
entity reference: Aminomethyltransferase, mitochondrial

NAD
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15846
xref: Reference/HMDB HMDB0000902
xref: Reference/CAS 53-84-9
xref: Reference/KEGG Compound C00003
xref: Reference/PubChem-compound 5893
xref: Reference/BioCyc NAD
xref: Reference/ChemSpider 5682
chemical formula: C21H27N7O14P2
molecular weight: 663.10913
structure: ChemicalStructure/PW C000721

Compound/PW C002033/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Allothreonine
stoichiometric coefficient: 1.0

Reference/KEGG Compound C01342
type: UnificationXref
id: C01342
db: KEGG Compound

Compound/PW C000784/Stoichiometry/1.0
type: Stoichiometry
physical entity: Acetaldehyde
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000902
type: UnificationXref
id: HMDB0000902
db: HMDB

Reference/CAS 28954-12-3
type: UnificationXref
id: 28954-12-3
db: CAS

Reference/UniProt Q9FPH3
type: UnificationXref
id: Q9FPH3
db: UniProt

Reference/BioCyc NAD(P)
type: UnificationXref
id: NAD(P)
db: BioCyc

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Reference/KEGG Compound C00143
type: UnificationXref
id: C00143
db: KEGG Compound

Reference/KEGG Compound C00022
type: UnificationXref
id: C00022
db: KEGG Compound

Reference/CAS 56-65-5
type: UnificationXref
id: 56-65-5
db: CAS

Reference/CAS 53-84-9
type: UnificationXref
id: 53-84-9
db: CAS

Reference/KEGG Compound C00026
type: UnificationXref
id: C00026
db: KEGG Compound

Reference/KEGG Compound C00025
type: UnificationXref
id: C00025
db: KEGG Compound

Compound/PW C000644/Stoichiometry/1.0
type: Stoichiometry
physical entity: 3-Phosphoglyceric acid
stoichiometric coefficient: 1.0

Reference/CAS 3432-99-3
type: UnificationXref
id: 3432-99-3
db: CAS

Reference/CAS 298-12-4
type: UnificationXref
id: 298-12-4
db: CAS

Compound/PW C000143/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0004041
type: UnificationXref
id: HMDB0004041
db: HMDB

Compound/PW C000774/Stoichiometry/1.0
type: Stoichiometry
physical entity: 10-Formyltetrahydrofolate
stoichiometric coefficient: 1.0

Reference/PubChem-compound 760
type: UnificationXref
id: 760
db: PubChem-compound

Reference/KEGG Compound C01005
type: UnificationXref
id: C01005
db: KEGG Compound

Reference/KEGG Compound C00037
type: UnificationXref
id: C00037
db: KEGG Compound

Reference/CAS 328-50-7
type: UnificationXref
id: 328-50-7
db: CAS

ChemicalStructure/PW C001144
type: ChemicalStructure
structure format: SMILES

Water
type: SmallMolecule
entity reference: Water

Reference/KEGG Compound C00041
type: UnificationXref
id: C00041
db: KEGG Compound

Reference/HMDB HMDB0001341
type: UnificationXref
id: HMDB0001341
db: HMDB

Reference/PubChem-compound 644350
type: UnificationXref
id: 644350
db: PubChem-compound

Reference/KEGG Compound C00048
type: UnificationXref
id: C00048
db: KEGG Compound

ChemicalStructure/PW C001034
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0001354
type: UnificationXref
id: HMDB0001354
db: HMDB

Reference/HMDB HMDB0000148
type: UnificationXref
id: HMDB0000148
db: HMDB

Reference/HMDB HMDB0000142
type: UnificationXref
id: HMDB0000142
db: HMDB

Compound/PW C000120 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Serine
stoichiometric coefficient: 1.0

3-Phosphoglyceric acid
type: SmallMoleculeReference
xref: Reference/BioCyc G3P
xref: Reference/PubChem-compound 724
xref: Reference/ChEBI CHEBI 17050
xref: Reference/ChemSpider 704
xref: Reference/CAS 820-11-1
xref: Reference/KEGG Compound C00597
xref: Reference/HMDB HMDB0000807
chemical formula: C3H7O7P
molecular weight: 185.99294
structure: ChemicalStructure/PW C000644

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

Compound/PW C000164/Stoichiometry/1.0
type: Stoichiometry
physical entity: Pyruvic acid
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00058
type: UnificationXref
id: C00058
db: KEGG Compound

Reference/BioCyc GLYOX
type: UnificationXref
id: GLYOX
db: BioCyc

Reference/HMDB HMDB0001487
type: UnificationXref
id: HMDB0001487
db: HMDB

Reference/CAS 56-86-0
type: UnificationXref
id: 56-86-0
db: CAS

Reference/UniProt A2RVV7
type: UnificationXref
id: A2RVV7
db: UniProt

Reference/BioCyc FORMATE
type: UnificationXref
id: FORMATE
db: BioCyc

L-Serine
type: SmallMolecule
cellular location: Mitochondrion
entity reference: L-Serine

Adenosine triphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15422
xref: Reference/PubChem-compound 5957
xref: Reference/HMDB HMDB0000538
xref: Reference/CAS 56-65-5
xref: Reference/ChemSpider 5742
xref: Reference/BioCyc ATP
xref: Reference/KEGG Compound C00002
chemical formula: C10H16N5O13P3
molecular weight: 506.99576
structure: ChemicalStructure/PW C000414

10-Formyltetrahydrofolate
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000972
xref: Reference/PubChem-compound 122347
xref: Reference/ChemSpider 109092
xref: Reference/ChEBI CHEBI 15637
xref: Reference/CAS 2800-34-2
xref: Reference/BioCyc 10-FORMYL-THF
xref: Reference/KEGG Compound C00234
chemical formula: C20H23N7O7
molecular weight: 473.1659
structure: ChemicalStructure/PW C000774

Reference/KEGG Compound C05519
type: UnificationXref
id: C05519
db: KEGG Compound

Compound/PW C000810/Stoichiometry/1.0
type: Stoichiometry
physical entity: Phosphohydroxypyruvic acid
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00188
type: UnificationXref
id: C00188
db: KEGG Compound

Reference/CAS 56-40-6
type: UnificationXref
id: 56-40-6
db: CAS

Reference/KEGG Compound C00065
type: UnificationXref
id: C00065
db: KEGG Compound

Acetaldehyde
type: SmallMolecule
entity reference: Acetaldehyde

Reference/CAS 2800-34-2
type: UnificationXref
id: 2800-34-2
db: CAS

Compound/PW C000120 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Serine
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000167
type: UnificationXref
id: HMDB0000167
db: HMDB

ChemicalStructure/PW C000164
type: ChemicalStructure
structure format: SMILES
structure data: CC(=O)C(O)=O

Threonine aldolase complex
type: Complex
component: threonine aldolase 2
component: Probable low-specificity L-threonine aldolase 1

Reference/ChEBI CHEBI 17050
type: UnificationXref
id: CHEBI:17050
db: ChEBI

Acetaldehyde
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15343
xref: Reference/KEGG Compound C00084
xref: Reference/CAS 75-07-0
xref: Reference/BioCyc ACETALD
xref: Reference/ChemSpider 172
xref: Reference/PubChem-compound 177
xref: Reference/HMDB HMDB0000990
chemical formula: C2H4O
molecular weight: 44.026215
structure: ChemicalStructure/PW C000784

Reference/HMDB HMDB0000161
type: UnificationXref
id: HMDB0000161
db: HMDB

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

L-Threonine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000167
xref: Reference/PubChem-compound 6288
xref: Reference/CAS 72-19-5
xref: Reference/ChemSpider 6051
xref: Reference/ChEBI CHEBI 16857
xref: Reference/KEGG Compound C00188
xref: Reference/BioCyc THR
chemical formula: C4H9NO3
molecular weight: 119.05824
structure: ChemicalStructure/PW C000109

Reference/PubChem-compound 724
type: UnificationXref
id: 724
db: PubChem-compound

L-Alanine
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00041
xref: Reference/ChemSpider 5735
xref: Reference/ChEBI CHEBI 16977
xref: Reference/BioCyc L-ALPHA-ALANINE
xref: Reference/HMDB HMDB0000161
xref: Reference/CAS 56-41-7
xref: Reference/PubChem-compound 5950
chemical formula: C3H7NO2
molecular weight: 89.047676
structure: ChemicalStructure/PW C000105

ReactionCatalysis7220
type: Catalysis
controller: Threonine aldolase complex
controlled: 4.1.2.48
control type: ACTIVATION

Reference/ChemSpider 5800
type: UnificationXref
id: 5800
db: ChemSpider

Reference/ChEBI CHEBI 37712
type: UnificationXref
id: CHEBI:37712
db: ChEBI

Reference/UniProt Q96255
type: UnificationXref
id: Q96255
db: UniProt

Phosphate
type: SmallMolecule
entity reference: Phosphate

Reference/HMDB HMDB0001024
type: UnificationXref
id: HMDB0001024
db: HMDB

Tetrahydrofolic acid
type: SmallMolecule
entity reference: Tetrahydrofolic acid

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Reference/ChemSpider 730
type: UnificationXref
id: 730
db: ChemSpider

Oxoglutaric acid
type: SmallMolecule
entity reference: Oxoglutaric acid

Compound/PW C000105/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Alanine
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00084
type: UnificationXref
id: C00084
db: KEGG Compound

ChemicalStructure/PW C002033
type: ChemicalStructure
structure format: SMILES
structure data: C[C@H](O)[C@H](N)C(O)=O

ChemicalStructure/PW C000095
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CCC(O)=O)C(O)=O

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

ChemicalStructure/PW C000092
type: ChemicalStructure
structure format: SMILES
structure data: OC=O

Reference/BioCyc 5,10-methenyl-thf
type: UnificationXref
id: 5,10-methenyl-thf
db: BioCyc

Reference/CAS 14265-44-2
type: UnificationXref
id: 14265-44-2
db: CAS

Reference/BioCyc PYRUVATE
type: UnificationXref
id: PYRUVATE
db: BioCyc

Reference/CAS 58-64-0
type: UnificationXref
id: 58-64-0
db: CAS

Reference/KEGG Compound C03232
type: UnificationXref
id: C03232
db: KEGG Compound

DL-O-Phosphoserine
type: SmallMolecule
entity reference: DL-O-Phosphoserine

Reference/BioCyc G3P
type: UnificationXref
id: G3P
db: BioCyc

L-Serine
type: SmallMolecule
entity reference: L-Serine

Compound/PW C000075/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glyoxylic acid
stoichiometric coefficient: 1.0

L-Serine
type: SmallMoleculeReference
xref: Reference/ChemSpider 5736
xref: Reference/ChEBI CHEBI 17115
xref: Reference/CAS 56-45-1
xref: Reference/KEGG Compound C00065
xref: Reference/PubChem-compound 5951
xref: Reference/HMDB HMDB0000187
xref: Reference/BioCyc SER
chemical formula: C3H7NO3
molecular weight: 105.042595
structure: ChemicalStructure/PW C000120

Reference/HMDB HMDB0000187
type: UnificationXref
id: HMDB0000187
db: HMDB

Reference/CAS 64-18-6
type: UnificationXref
id: 64-18-6
db: CAS

ChemicalStructure/PW C001045
type: ChemicalStructure
structure format: SMILES

Reference/PubChem-compound 22833512
type: UnificationXref
id: 22833512
db: PubChem-compound

ChemicalStructure/PW C000075
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)C=O

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

ChemicalStructure/PW C000078
type: ChemicalStructure
structure format: SMILES
structure data: NCC(O)=O

3.1.3.3
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001420/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001214/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000120/Stoichiometry/1.0
right: L-Serine
right: Phosphate
spontaneous: false
EC number: 3.1.3.3
left: Water
left: DL-O-Phosphoserine
name: DL-O-Phosphoserine + Water → L-Serine + Phosphate
conversion direction: LEFT_TO_RIGHT

1.1.1.95
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000721/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000810/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001144/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000644/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: NADH
right: Hydrogen Ion
right: Phosphohydroxypyruvic acid
spontaneous: false
EC number: 1.1.1.95
left: 3-Phosphoglyceric acid
left: NAD
name: 3-Phosphoglyceric acid + NAD → Hydrogen Ion + NADH + Phosphohydroxypyruvic acid
conversion direction: LEFT_TO_RIGHT

Transport576
type: Transport
participant stoichiometry: Compound/PW C000120 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000120 Mitochondrion/Stoichiometry/1.0
right: L-Serine
spontaneous: false
left: L-Serine
name: L-Serine (→) Transport: Arabidopsis thaliana, Cytosol to Arabidopsis thaliana, Cell, Mitochondrion
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc NADH
type: UnificationXref
id: NADH
db: BioCyc

Reference/BioCyc NAD
type: UnificationXref
id: NAD
db: BioCyc

Reference/HMDB HMDB0041827
type: UnificationXref
id: HMDB0041827
db: HMDB

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

Reference/ChemSpider 559356
type: UnificationXref
id: 559356
db: ChemSpider

L-Alanine
type: SmallMolecule
entity reference: L-Alanine

L-Threonine
type: SmallMolecule
entity reference: L-Threonine

Reaction7207
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000092/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001221/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000774/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104/Stoichiometry/1.0
right: Tetrahydrofolic acid
right: Formic acid
right: Adenosine triphosphate
spontaneous: false
left: Adenosine diphosphate
left: 10-Formyltetrahydrofolate
left: Phosphate
name: 10-Formyltetrahydrofolate + Adenosine diphosphate + Phosphate → Adenosine triphosphate + Formic acid + Tetrahydrofolic acid
conversion direction: LEFT_TO_RIGHT

Reaction7206
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001420/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000774/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001045/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Hydrogen Ion
right: 10-Formyltetrahydrofolate
spontaneous: false
left: 5,10-Methenyltetrahydrofolic acid
left: Water
name: 5,10-Methenyltetrahydrofolic acid + Water → 10-Formyltetrahydrofolate + Hydrogen Ion
conversion direction: LEFT_TO_RIGHT

2.6.1.44
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000105/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000075/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000164/Stoichiometry/1.0
right: Glycine
right: Pyruvic acid
spontaneous: false
EC number: 2.6.1.44
left: Glyoxylic acid
left: L-Alanine
name: Glyoxylic acid + L-Alanine → Glycine + Pyruvic acid
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc 3-P-SERINE
type: UnificationXref
id: 3-P-SERINE
db: BioCyc

4.1.2.48
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000109/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000784/Stoichiometry/1.0
right: Glycine
right: Acetaldehyde
spontaneous: false
EC number: 4.1.2.48
left: L-Threonine
name: L-Threonine → Acetaldehyde + Glycine
conversion direction: LEFT_TO_RIGHT

Reference/ChemSpider 740
type: UnificationXref
id: 740
db: ChemSpider

ChemicalStructure/PW C001178
type: ChemicalStructure
structure format: SMILES

2.6.1.52
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000095/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000810/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001214/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000134/Stoichiometry/1.0
right: Oxoglutaric acid
right: DL-O-Phosphoserine
spontaneous: false
EC number: 2.6.1.52
left: L-Glutamic acid
left: Phosphohydroxypyruvic acid
name: L-Glutamic acid + Phosphohydroxypyruvic acid → DL-O-Phosphoserine + Oxoglutaric acid
conversion direction: LEFT_TO_RIGHT

2.1.2.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001420/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001178/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001221/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000120/Stoichiometry/1.0
right: Water
right: 5,10-Methylene-THF
right: Glycine
spontaneous: false
EC number: 2.1.2.1
left: Tetrahydrofolic acid
left: L-Serine
name: L-Serine + Tetrahydrofolic acid → 5,10-Methylene-THF + Glycine + Water
conversion direction: LEFT_TO_RIGHT

2.1.2.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001420/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001178/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001221/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000120/Stoichiometry/1.0
right: Water
right: 5,10-Methylene-THF
right: Glycine
spontaneous: false
EC number: 2.1.2.1
left: Tetrahydrofolic acid
left: L-Serine
name: L-Serine + Tetrahydrofolic acid → 5,10-Methylene-THF + Glycine + Water
conversion direction: LEFT_TO_RIGHT

Reference/CAS 820-11-1
type: UnificationXref
id: 820-11-1
db: CAS

1.5.1.5,3.5.4.9, 6.3.4.3
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000146/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001178/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001045/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000143/Stoichiometry/1.0
right: 5,10-Methenyltetrahydrofolic acid
right: NADPH
spontaneous: false
EC number: 1.5.1.5,3.5.4.9, 6.3.4.3
left: 5,10-Methylene-THF
left: NADP
name: 5,10-Methylene-THF + NADP → 5,10-Methenyltetrahydrofolic acid + NADPH
conversion direction: LEFT_TO_RIGHT

2.1.2.10
type: BiochemicalReaction
participant stoichiometry: Compound/PW C022608/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001178/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001221/Stoichiometry/1.0
right: 5,10-Methylene-THF
right: Ammonium
spontaneous: false
EC number: 2.1.2.10
left: Tetrahydrofolic acid
left: Glycine
name: Glycine + Tetrahydrofolic acid → 5,10-Methylene-THF + Ammonium
conversion direction: LEFT_TO_RIGHT

Reference/ChemSpider 30572
type: UnificationXref
id: 30572
db: ChemSpider

Reference/ChemSpider 17215925
type: UnificationXref
id: 17215925
db: ChemSpider

Reference/TAXONOMY 3702
type: UnificationXref
id: 3702
db: TAXONOMY

NADH
type: SmallMolecule
entity reference: NADH

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

4.1.2.48
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: Compound/PW C002033/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000784/Stoichiometry/1.0
right: L-Allothreonine
spontaneous: false
EC number: 4.1.2.48
left: Glycine
left: Acetaldehyde
name: Acetaldehyde + Glycine ↔ L-Allothreonine
conversion direction: REVERSIBLE

Reference/HMDB HMDB0000538
type: UnificationXref
id: HMDB0000538
db: HMDB

Compound/PW C000414/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 1.0

Reference/PubChem-compound 51
type: UnificationXref
id: 51
db: PubChem-compound

Pyruvic acid
type: SmallMolecule
entity reference: Pyruvic acid

Reference/ChEBI CHEBI 15846
type: UnificationXref
id: CHEBI:15846
db: ChEBI

Reference/BioCyc ADP
type: UnificationXref
id: ADP
db: BioCyc

Pyruvic acid
type: SmallMoleculeReference
xref: Reference/PubChem-compound 1060
xref: Reference/HMDB HMDB0000243
xref: Reference/CAS 127-17-3
xref: Reference/BioCyc PYRUVATE
xref: Reference/KEGG Compound C00022
xref: Reference/ChEBI CHEBI 32816
xref: Reference/ChemSpider 1031
chemical formula: C3H4O3
molecular weight: 88.016045
structure: ChemicalStructure/PW C000164

Reference/CAS 53-59-8
type: UnificationXref
id: 53-59-8
db: CAS

DL-O-Phosphoserine
type: SmallMoleculeReference
xref: Reference/ChemSpider 104
xref: Reference/BioCyc 3-P-SERINE
xref: Reference/HMDB HMDB0001721
xref: Reference/PubChem-compound 106
xref: Reference/ChEBI CHEBI 37712
xref: Reference/CAS 17885-08-4
xref: Reference/KEGG Compound C01005
chemical formula: C3H8NO6P
molecular weight: 185.00893
structure: ChemicalStructure/PW C001214

Reference/BioCyc THR
type: UnificationXref
id: THR
db: BioCyc

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Reference/GENE ONTOLOGY GO 0005829
type: UnificationXref
id: GO:0005829
db: GENE ONTOLOGY

Reference/ChemSpider 278
type: UnificationXref
id: 278
db: ChemSpider

Tetrahydrofolic acid
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 20506
xref: Reference/ChemSpider 18714427
xref: Reference/HMDB HMDB0001846
xref: Reference/PubChem-compound 13781857
xref: Reference/BioCyc THF
xref: Reference/CAS 135-16-0
xref: Reference/KEGG Compound C00101
chemical formula: C19H23N7O6
molecular weight: 445.171
structure: ChemicalStructure/PW C001221

Oxoglutaric acid
type: SmallMoleculeReference
xref: Reference/CAS 328-50-7
xref: Reference/PubChem-compound 51
xref: Reference/BioCyc 2-KETOGLUTARATE
xref: Reference/HMDB HMDB0000208
xref: Reference/ChEBI CHEBI 30915
xref: Reference/KEGG Compound C00026
xref: Reference/ChemSpider 50
chemical formula: C5H6O5
molecular weight: 146.02153
structure: ChemicalStructure/PW C000134

Reference/ChEBI CHEBI 16908
type: UnificationXref
id: CHEBI:16908
db: ChEBI

Phosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00009
xref: Reference/PubChem-compound 1061
xref: Reference/CAS 14265-44-2
xref: Reference/HMDB HMDB0001429
xref: Reference/BioCyc CPD-8587
xref: Reference/ChEBI CHEBI 18367
xref: Reference/ChemSpider 1032
chemical formula: H3O4P
molecular weight: 97.9769
structure: ChemicalStructure/PW C001104

NADPH
type: SmallMolecule
entity reference: NADPH

Reference/BioCyc SER
type: UnificationXref
id: SER
db: BioCyc

Reference/HMDB HMDB0001533
type: UnificationXref
id: HMDB0001533
db: HMDB

NADP
type: SmallMolecule
entity reference: NADP

NADPH
type: SmallMoleculeReference
xref: Reference/CAS 53-57-6
xref: Reference/HMDB HMDB0000221
xref: Reference/PubChem-compound 22833512
xref: Reference/BioCyc NADPH
xref: Reference/ChemSpider 17215925
xref: Reference/KEGG Compound C00005
xref: Reference/ChEBI CHEBI 16474
chemical formula: C21H30N7O17P3
molecular weight: 745.0911
structure: ChemicalStructure/PW C000146

Reference/UniProt O65396
type: UnificationXref
id: O65396
db: UniProt

NADP
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00006
xref: Reference/CAS 53-59-8
xref: Reference/BioCyc NAD(P)
xref: Reference/HMDB HMDB0000217
xref: Reference/ChEBI CHEBI 18009
xref: Reference/PubChem-compound 5886
xref: Reference/ChemSpider 5675
chemical formula: C21H28N7O17P3
molecular weight: 743.07544
structure: ChemicalStructure/PW C000143

Mitochondrion
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005739

Reference/BioCyc THF
type: UnificationXref
id: THF
db: BioCyc

Reference/BioCyc GLY
type: UnificationXref
id: GLY
db: BioCyc

Reference/BioCyc NADPH
type: UnificationXref
id: NADPH
db: BioCyc

ReactionCatalysis7188
type: Catalysis
controller: Serine hydroxymethyltransferase 7
controlled: 2.1.2.1
control type: ACTIVATION

ReactionCatalysis7186
type: Catalysis
controller: Phosphoserine aminotransferase 1, chloroplastic
controlled: 2.6.1.52
control type: ACTIVATION

Reference/ChEBI CHEBI 16857
type: UnificationXref
id: CHEBI:16857
db: ChEBI

Reference/ChEBI CHEBI 16977
type: UnificationXref
id: CHEBI:16977
db: ChEBI

Reference/HMDB HMDB0000208
type: UnificationXref
id: HMDB0000208
db: HMDB

Reference/ChEBI CHEBI 28718
type: UnificationXref
id: CHEBI:28718
db: ChEBI

Reference/ChemSpider 218
type: UnificationXref
id: 218
db: ChemSpider

ChemicalStructure/PW C001221
type: ChemicalStructure
structure format: SMILES

Reference/CAS 58-68-4
type: UnificationXref
id: 58-68-4
db: CAS

L-Glutamic acid
type: SmallMolecule
entity reference: L-Glutamic acid

Reference/CAS 72-19-5
type: UnificationXref
id: 72-19-5
db: CAS

Reference/PubChem-compound 99289
type: UnificationXref
id: 99289
db: PubChem-compound

5,10-Methenyltetrahydrofolic acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001354
xref: Reference/CAS 7444-29-3
xref: Reference/BioCyc 5,10-methenyl-thf
xref: Reference/ChEBI CHEBI 15636
xref: Reference/PubChem-compound 644350
xref: Reference/ChemSpider 559356
xref: Reference/KEGG Compound C00445
chemical formula: C20H21N7O6
molecular weight: 455.15533
structure: ChemicalStructure/PW C001045

ChemicalStructure/PW C001104
type: ChemicalStructure
structure format: SMILES
structure data: OP(O)(O)=O

Compound/PW C001221/Stoichiometry/1.0
type: Stoichiometry
physical entity: Tetrahydrofolic acid
stoichiometric coefficient: 1.0

ChemicalStructure/PW C000134
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)CCC(=O)C(O)=O

Reference/HMDB HMDB0000217
type: UnificationXref
id: HMDB0000217
db: HMDB

L-Allothreonine
type: SmallMolecule
entity reference: L-Allothreonine

Reference/ChEBI CHEBI 30915
type: UnificationXref
id: CHEBI:30915
db: ChEBI

Reference/ChEBI CHEBI 15637
type: UnificationXref
id: CHEBI:15637
db: ChEBI

Glycine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000123
xref: Reference/BioCyc GLY
xref: Reference/ChemSpider 730
xref: Reference/PubChem-compound 5257127
xref: Reference/CAS 56-40-6
xref: Reference/ChEBI CHEBI 15428
xref: Reference/KEGG Compound C00037
chemical formula: C2H5NO2
molecular weight: 75.03203
structure: ChemicalStructure/PW C000078

Compound/PW C001045/Stoichiometry/1.0
type: Stoichiometry
physical entity: 5,10-Methenyltetrahydrofolic acid
stoichiometric coefficient: 1.0

ReactionCatalysis7189
type: Catalysis
controller: Serine hydroxymethyltransferase 6
controlled: 2.1.2.1
control type: ACTIVATION

Formic acid
type: SmallMolecule
entity reference: Formic acid

Glyoxylic acid
type: SmallMoleculeReference
xref: Reference/BioCyc GLYOX
xref: Reference/ChemSpider 740
xref: Reference/CAS 298-12-4
xref: Reference/HMDB HMDB0000119
xref: Reference/PubChem-compound 760
xref: Reference/ChEBI CHEBI 16891
xref: Reference/KEGG Compound C00048
chemical formula: C2H2O3
molecular weight: 74.0004
structure: ChemicalStructure/PW C000075

ReactionCatalysis7195
type: Catalysis
controller: Serine--glyoxylate aminotransferase
controlled: 2.6.1.44
control type: ACTIVATION

ReactionCatalysis7194
type: Catalysis
controller: Probable low-specificity L-threonine aldolase 1
controlled: 4.1.2.48
control type: ACTIVATION

ReactionCatalysis7193
type: Catalysis
controller: Bifunctional protein FolD 1, mitochondrial
controlled: Reaction7207
control type: ACTIVATION

ReactionCatalysis7192
type: Catalysis
controller: Bifunctional protein FolD 1, mitochondrial
controlled: Reaction7206
control type: ACTIVATION

ReactionCatalysis7197
type: Catalysis
controller: D-3-phosphoglycerate dehydrogenase 2, chloroplastic
controlled: 1.1.1.95
control type: ACTIVATION

ReactionCatalysis7196
type: Catalysis
controller: Phosphoserine phosphatase, chloroplastic
controlled: 3.1.3.3
control type: ACTIVATION

Reference/HMDB HMDB0001429
type: UnificationXref
id: HMDB0001429
db: HMDB

ReactionCatalysis7191
type: Catalysis
controller: Bifunctional protein FolD 1, mitochondrial
controlled: 1.5.1.5,3.5.4.9, 6.3.4.3
control type: ACTIVATION

ReactionCatalysis7190
type: Catalysis
controller: Aminomethyltransferase, mitochondrial
controlled: 2.1.2.10
control type: ACTIVATION

ChemicalStructure/PW C000143
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000221
type: UnificationXref
id: HMDB0000221
db: HMDB

5,10-Methylene-THF
type: SmallMolecule
entity reference: 5,10-Methylene-THF

Reference/PubChem-compound 5257127
type: UnificationXref
id: 5257127
db: PubChem-compound

Reference/ChemSpider 6051
type: UnificationXref
id: 6051
db: ChemSpider

5,10-Methylene-THF
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001533
xref: Reference/CAS 3432-99-3
xref: Reference/PubChem-compound 439175
xref: Reference/ChEBI CHEBI 15636
xref: Reference/KEGG Compound C00143
xref: Reference/BioCyc METHYLENE-THF
xref: Reference/ChemSpider 388320
chemical formula: C20H23N7O6
molecular weight: 457.171
structure: ChemicalStructure/PW C001178

ChemicalStructure/PW C000146
type: ChemicalStructure
structure format: SMILES

Glycine Metabolism
type: Pathway
pathway order: PathwayTransport/26588
pathway order: PathwayEnzymeReaction/26585
pathway order: PathwayEnzymeReaction/26586
pathway order: PathwayEnzymeReaction/26587
pathway order: PathwayEnzymeReaction/26631
pathway order: PathwayEnzymeReaction/26578
pathway order: PathwayEnzymeReaction/26589
pathway order: PathwayEnzymeReaction/26590
pathway order: PathwayEnzymeReaction/26580
pathway order: PathwayEnzymeReaction/26581
pathway order: PathwayEnzymeReaction/26582
pathway order: PathwayEnzymeReaction/26583
pathway order: PathwayEnzymeReaction/26584
pathway component: ReactionCatalysis7188
pathway component: ReactionCatalysis7220
pathway component: ReactionCatalysis7186
pathway component: 3.1.3.3
pathway component: ReactionCatalysis7189
pathway component: 1.1.1.95
pathway component: Transport576
pathway component: 4.1.2.48
pathway component: ReactionCatalysis7195
pathway component: ReactionCatalysis7194
pathway component: ReactionCatalysis7193
pathway component: ReactionCatalysis7192
pathway component: ReactionCatalysis7197
pathway component: ReactionCatalysis7196
pathway component: ReactionCatalysis7191
pathway component: ReactionCatalysis7190
pathway component: Reaction7207
pathway component: Reaction7206
pathway component: 2.6.1.44
pathway component: 2.6.1.52
pathway component: 2.1.2.1
pathway component: 1.5.1.5,3.5.4.9, 6.3.4.3
pathway component: 2.1.2.10
xref: Reference/PathWhiz PW002535
xref: Reference/SMPDB SMP0002428
organism: Arabidopsis thaliana

Reference/BioCyc GLT
type: UnificationXref
id: GLT
db: BioCyc

Compound/PW C000120/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Serine
stoichiometric coefficient: 1.0

Reference/CAS 53-57-6
type: UnificationXref
id: 53-57-6
db: CAS

Reference/PubChem-compound 105
type: UnificationXref
id: 105
db: PubChem-compound

Reference/PubChem-compound 106
type: UnificationXref
id: 106
db: PubChem-compound

Reference/ChEBI CHEBI 28938
type: UnificationXref
id: CHEBI:28938
db: ChEBI

ChemicalStructure/PW C000105
type: ChemicalStructure
structure format: SMILES
structure data: C[C@H](N)C(O)=O

Reference/PubChem-compound 5950
type: UnificationXref
id: 5950
db: PubChem-compound

Reference/PubChem-compound 5951
type: UnificationXref
id: 5951
db: PubChem-compound

ChemicalStructure/PW C000109
type: ChemicalStructure
structure format: SMILES
structure data: C[C@@H](O)[C@H](N)C(O)=O

Glyoxylic acid
type: SmallMolecule
entity reference: Glyoxylic acid

5,10-Methenyltetrahydrofolic acid
type: SmallMolecule
entity reference: 5,10-Methenyltetrahydrofolic acid

NADH
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001487
xref: Reference/CAS 58-68-4
xref: Reference/PubChem-compound 439153
xref: Reference/BioCyc NADH
xref: Reference/ChemSpider 388299
xref: Reference/KEGG Compound C00004
xref: Reference/ChEBI CHEBI 16908
chemical formula: C21H29N7O14P2
molecular weight: 665.12476
structure: ChemicalStructure/PW C001144

Glycine
type: SmallMolecule
entity reference: Glycine

Reference/PubChem-compound 5957
type: UnificationXref
id: 5957
db: PubChem-compound

Reference/ChEBI CHEBI 15636
type: UnificationXref
id: CHEBI:15636
db: ChEBI

Reference/HMDB HMDB0000119
type: UnificationXref
id: HMDB0000119
db: HMDB

Reference/BioCyc 3-P-HYDROXYPYRUVATE
type: UnificationXref
id: 3-P-HYDROXYPYRUVATE
db: BioCyc

Reference/HMDB HMDB0000123
type: UnificationXref
id: HMDB0000123
db: HMDB

Reference/ChemSpider 104
type: UnificationXref
id: 104
db: ChemSpider

ChemicalStructure/PW C000120
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CO)C(O)=O

Adenosine diphosphate
type: SmallMolecule
entity reference: Adenosine diphosphate

Reference/HMDB HMDB0000243
type: UnificationXref
id: HMDB0000243
db: HMDB

Reference/ChemSpider 103
type: UnificationXref
id: 103
db: ChemSpider

Reference/GENE ONTOLOGY GO 0005739
type: UnificationXref
id: GO:0005739
db: GENE ONTOLOGY

ChemicalStructure/PW C001214
type: ChemicalStructure
structure format: SMILES
structure data: NC(COP(O)(O)=O)C(O)=O

Adenosine diphosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00008
xref: Reference/PubChem-compound 6022
xref: Reference/ChemSpider 5800
xref: Reference/CAS 58-64-0
xref: Reference/BioCyc ADP
xref: Reference/ChEBI CHEBI 16761
xref: Reference/HMDB HMDB0001341
chemical formula: C10H15N5O10P2
molecular weight: 427.02942
structure: ChemicalStructure/PW C001034

Reference/SMPDB SMP0002428
type: UnificationXref
id: SMP0002428
db: SMPDB

Compound/PW C000078/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glycine
stoichiometric coefficient: 1.0

Compound/PW C000721/Stoichiometry/1.0
type: Stoichiometry
physical entity: NAD
stoichiometric coefficient: 1.0

Reference/BioCyc CPD-8587
type: UnificationXref
id: CPD-8587
db: BioCyc

ChemicalStructure/PW C000721
type: ChemicalStructure
structure format: SMILES

Reference/ChEBI CHEBI 16891
type: UnificationXref
id: CHEBI:16891
db: ChEBI

Reference/HMDB HMDB0000807
type: UnificationXref
id: HMDB0000807
db: HMDB

Reference/ChemSpider 5682
type: UnificationXref
id: 5682
db: ChemSpider

Serine hydroxymethyltransferase 7
type: ProteinReference
xref: Reference/UniProt Q84WV0

Phosphoserine aminotransferase 1, chloroplastic
type: ProteinReference
xref: Reference/UniProt Q96255

Serine hydroxymethyltransferase 6
type: ProteinReference
xref: Reference/UniProt Q9LM59

D-3-phosphoglycerate dehydrogenase 2, chloroplastic
type: ProteinReference
xref: Reference/UniProt O04130

Phosphoserine phosphatase, chloroplastic
type: ProteinReference
xref: Reference/UniProt O82796

Bifunctional protein FolD 1, mitochondrial
type: ProteinReference
xref: Reference/UniProt A2RVV7

Aminomethyltransferase, mitochondrial
type: ProteinReference
xref: Reference/UniProt O65396

Serine--glyoxylate aminotransferase
type: ProteinReference
xref: Reference/UniProt Q56YA5

Probable low-specificity L-threonine aldolase 1
type: ProteinReference
xref: Reference/UniProt Q8RXU4

Reference/ChemSpider 5675
type: UnificationXref
id: 5675
db: ChemSpider

Reference/CAS 14798-03-9
type: UnificationXref
id: 14798-03-9
db: CAS

Reference/PubChem-compound 18971002
type: UnificationXref
id: 18971002
db: PubChem-compound

Reference/ChEBI CHEBI 15422
type: UnificationXref
id: CHEBI:15422
db: ChEBI

Arabidopsis thaliana
type: BioSource
xref: Reference/TAXONOMY 3702

Reference/ChemSpider 388299
type: UnificationXref
id: 388299
db: ChemSpider

Formic acid
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 30751
xref: Reference/ChemSpider 278
xref: Reference/PubChem-compound 18971002
xref: Reference/BioCyc FORMATE
xref: Reference/CAS 64-18-6
xref: Reference/KEGG Compound C00058
xref: Reference/HMDB HMDB0000142
chemical formula: CH2O2
molecular weight: 46.005478
structure: ChemicalStructure/PW C000092

L-Allothreonine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 99289
xref: Reference/ChemSpider 89699
xref: Reference/KEGG Compound C05519
xref: Reference/ChEBI CHEBI 28718
xref: Reference/HMDB HMDB0004041
xref: Reference/CAS 28954-12-3
xref: Reference/BioCyc L-ALLO-THREONINE
chemical formula: C4H9NO3
molecular weight: 119.05824
structure: ChemicalStructure/PW C002033

Reference/CAS 127-17-3
type: UnificationXref
id: 127-17-3
db: CAS

Reference/ChEBI CHEBI 30933
type: UnificationXref
id: CHEBI:30933
db: ChEBI

L-Glutamic acid
type: SmallMoleculeReference
xref: Reference/PubChem-compound 33032
xref: Reference/ChEBI CHEBI 16015
xref: Reference/ChemSpider 30572
xref: Reference/HMDB HMDB0000148
xref: Reference/CAS 56-86-0
xref: Reference/BioCyc GLT
xref: Reference/KEGG Compound C00025
chemical formula: C5H9NO4
molecular weight: 147.05316
structure: ChemicalStructure/PW C000095

Reference/PubChem-compound 33032
type: UnificationXref
id: 33032
db: PubChem-compound

ChemicalStructure/PW C022608
type: ChemicalStructure
structure format: SMILES
structure data: [NH4+]

Reference/UniProt Q84WV0
type: UnificationXref
id: Q84WV0
db: UniProt

threonine aldolase 2
type: ProteinReference
xref: Reference/UniProt Q9FPH3

Compound/PW C001144/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADH
stoichiometric coefficient: 1.0

Compound/PW C000134/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxoglutaric acid
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16761
type: UnificationXref
id: CHEBI:16761
db: ChEBI

Compound/PW C000109/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Threonine
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15428
type: UnificationXref
id: CHEBI:15428
db: ChEBI

Reference/UniProt O82796
type: UnificationXref
id: O82796
db: UniProt

Reference/UniProt O04130
type: UnificationXref
id: O04130
db: UniProt

Reference/BioCyc 2-KETOGLUTARATE
type: UnificationXref
id: 2-KETOGLUTARATE
db: BioCyc

ChemicalStructure/PW C000644
type: ChemicalStructure
structure format: SMILES
structure data: OC(COP(O)(O)=O)C(O)=O

Compound/PW C001104/Stoichiometry/1.0
type: Stoichiometry
physical entity: Phosphate
stoichiometric coefficient: 1.0

Reference/UniProt Q56YA5
type: UnificationXref
id: Q56YA5
db: UniProt

Reference/PubChem-compound 5893
type: UnificationXref
id: 5893
db: PubChem-compound

Phosphohydroxypyruvic acid
type: SmallMolecule
entity reference: Phosphohydroxypyruvic acid

Reference/HMDB HMDB0000972
type: UnificationXref
id: HMDB0000972
db: HMDB

Reference/ChEBI CHEBI 30751
type: UnificationXref
id: CHEBI:30751
db: ChEBI

ChemicalStructure/PW C000774
type: ChemicalStructure
structure format: SMILES

Reference/CAS 75-07-0
type: UnificationXref
id: 75-07-0
db: CAS

Reference/ChemSpider 172
type: UnificationXref
id: 172
db: ChemSpider

Reference/ChEBI CHEBI 32816
type: UnificationXref
id: CHEBI:32816
db: ChEBI

L-Serine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Serine

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Reference/BioCyc ACETALD
type: UnificationXref
id: ACETALD
db: BioCyc

Reference/CAS 56-45-1
type: UnificationXref
id: 56-45-1
db: CAS

ChemicalStructure/PW C000414
type: ChemicalStructure
structure format: SMILES

Reference/PubChem-compound 5886
type: UnificationXref
id: 5886
db: PubChem-compound

Compound/PW C022608/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ammonium
stoichiometric coefficient: 1.0

Compound/PW C001420/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

ChemicalStructure/PW C000784
type: ChemicalStructure
structure format: SMILES
structure data: CC=O

Reference/ChEBI CHEBI 15343
type: UnificationXref
id: CHEBI:15343
db: ChEBI

Reference/PubChem-compound 16741146
type: UnificationXref
id: 16741146
db: PubChem-compound

Reference/HMDB HMDB0001721
type: UnificationXref
id: HMDB0001721
db: HMDB

Reference/HMDB HMDB0000990
type: UnificationXref
id: HMDB0000990
db: HMDB

Reference/PubChem-compound 1060
type: UnificationXref
id: 1060
db: PubChem-compound

Reference/PubChem-compound 1061
type: UnificationXref
id: 1061
db: PubChem-compound

Reference/PathWhiz PW002535
type: UnificationXref
id: PW002535
db: PathWhiz

Reference/ChemSpider 109092
type: UnificationXref
id: 109092
db: ChemSpider

Reference/HMDB HMDB0001846
type: UnificationXref
id: HMDB0001846
db: HMDB

Reference/PubChem-compound 177
type: UnificationXref
id: 177
db: PubChem-compound

Reference/ChemSpider 89699
type: UnificationXref
id: 89699
db: ChemSpider

Reference/PubChem-compound 13781857
type: UnificationXref
id: 13781857
db: PubChem-compound