Compound/PW C001420 Mitochondrial Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 2.0

F-type H+-transporting ATPase subunit epsilon
type: ProteinReference
xref: Reference/UniProt Q96253
organism: Arabidopsis thaliana

F-type H+-transporting ATPase subunit delta
type: ProteinReference
xref: Reference/UniProt Q96252
organism: Arabidopsis thaliana

Reference/UniProt Q9C9Z5
type: UnificationXref
id: Q9C9Z5
db: UniProt

F-type H+-transporting ATPase subunit a
type: ProteinReference
xref: Reference/UniProt P93298
organism: Arabidopsis thaliana

F-type H+-transporting ATPase subunit O
type: ProteinReference
xref: Reference/UniProt Q96251
organism: Arabidopsis thaliana

Reference/PubChem-compound 6022
type: UnificationXref
id: 6022
db: PubChem-compound

Reference/TAXONOMY 3702
type: UnificationXref
id: 3702
db: TAXONOMY

F-type H+-transporting ATPase subunit gamma
type: ProteinReference
xref: Reference/UniProt Q96250
organism: Arabidopsis thaliana

Reference/UniProt Q9FT52
type: UnificationXref
id: Q9FT52
db: UniProt

F-type H+-transporting ATPase subunit delta
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit delta

oxidized c-type cytochrome
type: ProteinReference
organism: Arabidopsis thaliana

reduced c-type cytochrome
type: ProteinReference
organism: Arabidopsis thaliana

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

cytochrome c oxidase subunit 5b-1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase subunit 5b-1

Reference/UniProt P42792
type: UnificationXref
id: P42792
db: UniProt

Reference/PubChem-compound 439153
type: UnificationXref
id: 439153
db: PubChem-compound

Reference/UniProt Q9LK29
type: UnificationXref
id: Q9LK29
db: UniProt

Reference/UniProt Q9LJQ9
type: UnificationXref
id: Q9LJQ9
db: UniProt

Reference/UniProt Q9SX77
type: UnificationXref
id: Q9SX77
db: UniProt

Reference/CAS 110-17-8
type: UnificationXref
id: 110-17-8
db: CAS

Reference/PubChem-compound 21883788
type: UnificationXref
id: 21883788
db: PubChem-compound

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

NADH dehydrogenase [ubiquinone] iron-sulfur protein 6
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A

F-type H+-transporting ATPase subunit d
type: ProteinReference
xref: Reference/UniProt Q9FT52
organism: Arabidopsis thaliana

F-type H+-transporting ATPase subunit c
type: ProteinReference
xref: Reference/UniProt P60112
organism: Arabidopsis thaliana

Reference/UniProt Q9M9M6
type: UnificationXref
id: Q9M9M6
db: UniProt

Reference/UniProt Q945M1
type: UnificationXref
id: Q945M1
db: UniProt

Reference/UniProt Q9M9M9
type: UnificationXref
id: Q9M9M9
db: UniProt

Reference/UniProt O22769
type: UnificationXref
id: O22769
db: UniProt

Reference/HMDB HMDB0000538
type: UnificationXref
id: HMDB0000538
db: HMDB

Reference/BioCyc ATP
type: UnificationXref
id: ATP
db: BioCyc

Protein/Generic333 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: reduced c-type cytochrome
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15846
type: UnificationXref
id: CHEBI:15846
db: ChEBI

Reference/BioCyc ADP
type: UnificationXref
id: ADP
db: BioCyc

Reference/UniProt Q9FLX7
type: UnificationXref
id: Q9FLX7
db: UniProt

reduced c-type cytochrome
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: reduced c-type cytochrome

NADH
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: NADH

succinate dehydrogenase [ubiquinone] flavoprotein subunit 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1

Reference/UniProt P53665
type: UnificationXref
id: P53665
db: UniProt

Reference/SMPDB SMP0012092
type: UnificationXref
id: SMP0012092
db: SMPDB

NADH-ubiquinone oxidoreductase chain 6
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 6

Reference/ChemSpider 5742
type: UnificationXref
id: 5742
db: ChemSpider

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

NADH dehydrogenase [ubiquinone] 1 alpha/beta subcomplex 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha/beta subcomplex 1

Reference/ChemSpider 952
type: UnificationXref
id: 952
db: ChemSpider

Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Electron
stoichiometric coefficient: 2.0

cytochrome c oxidase subunit 6b-1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase subunit 6b-1

Compound/PW C001104 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Phosphate
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16908
type: UnificationXref
id: CHEBI:16908
db: ChEBI

Compound/Generic162 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: an ubiquinol
stoichiometric coefficient: 1.0

Compound/PW C001144 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADH
stoichiometric coefficient: 1.0

Protein/Generic332 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: oxidized c-type cytochrome
stoichiometric coefficient: 1.0

Phosphate
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Phosphate

Phosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00009
xref: Reference/PubChem-compound 1061
xref: Reference/CAS 14265-44-2
xref: Reference/HMDB HMDB0001429
xref: Reference/BioCyc CPD-8587
xref: Reference/ChEBI CHEBI 18367
xref: Reference/ChemSpider 1032
chemical formula: H3O4P
molecular weight: 97.9769
structure: ChemicalStructure/PW C001104

ubiquinol-cytochrome c reductase iron-sulfur subunit
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: ubiquinol-cytochrome c reductase iron-sulfur subunit

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

F-type H+-transporting ATPase subunit O
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit O

NADH dehydrogenase [ubiquinone] flavoprotein 2
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] flavoprotein 2

NAD
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: NAD

ubiquinone
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: ubiquinone

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4

NADH-ubiquinone oxidoreductase chain 4
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 4

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A
type: ProteinReference
xref: Reference/UniProt Q42599
organism: Arabidopsis thaliana

Reaction48110
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000174 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000088 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/2.0
right: Hydrogen Ion
right: Fumaric acid
right: Electron
spontaneous: false
left: Succinic acid
name: Succinic acid → 2 Electron + Fumaric acid + 2 Hydrogen Ion
conversion direction: LEFT_TO_RIGHT

Reaction48111
type: BiochemicalReaction
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/Generic163 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic162 Mitochondrial Inner Membrane/Stoichiometry/1.0
right: an ubiquinol
spontaneous: false
left: Hydrogen Ion
left: ubiquinone
left: Electron
name: 2 Electron + 2 Hydrogen Ion + ubiquinone → an ubiquinol
conversion direction: LEFT_TO_RIGHT

Reaction48112
type: BiochemicalReaction
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/Generic163 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/Generic162 Mitochondrial Inner Membrane/Stoichiometry/1.0
right: Hydrogen Ion
right: ubiquinone
right: Electron
spontaneous: false
left: an ubiquinol
name: an ubiquinol → 2 Electron + 2 Hydrogen Ion + ubiquinone
conversion direction: LEFT_TO_RIGHT

Reaction48113
type: BiochemicalReaction
participant stoichiometry: Protein/Generic333 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Protein/Generic332 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
right: reduced c-type cytochrome
spontaneous: false
left: oxidized c-type cytochrome
left: Electron
name: 2 Electron + oxidized c-type cytochrome → reduced c-type cytochrome
conversion direction: LEFT_TO_RIGHT

Reaction48114
type: BiochemicalReaction
participant stoichiometry: Protein/Generic332 Mitochondrial Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Protein/Generic333 Mitochondrial Inner Membrane/Stoichiometry/4.0
right: oxidized c-type cytochrome
spontaneous: false
left: Electron
left: reduced c-type cytochrome
name: 4 Electron + 4 reduced c-type cytochrome → 4 oxidized c-type cytochrome
conversion direction: LEFT_TO_RIGHT

Reaction48115
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001420 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C001065 Mitochondrial Inner Membrane/Stoichiometry/1.0
right: Water
right: Electron
spontaneous: false
left: Hydrogen Ion
left: Oxygen
name: 4 Hydrogen Ion + Oxygen → 4 Electron + 2 Water
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc CPD-6641
type: UnificationXref
id: CPD-6641
db: BioCyc

Reaction48116
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000414 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Mitochondrial Inner Membrane/Stoichiometry/1.0
right: Adenosine triphosphate
spontaneous: false
left: Adenosine diphosphate
left: Phosphate
name: Adenosine diphosphate + Phosphate → Adenosine triphosphate
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc SUC
type: UnificationXref
id: SUC
db: BioCyc

NADH-ubiquinone oxidoreductase chain 3
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 3

Reference/UniProt Q9LHI0
type: UnificationXref
id: Q9LHI0
db: UniProt

Reference/CAS 58-68-4
type: UnificationXref
id: 58-68-4
db: CAS

ChemicalStructure/PW C001104
type: ChemicalStructure
structure format: SMILES
structure data: OP(O)(O)=O

NADH dehydrogenase [ubiquinone] 1 alpha/beta subcomplex 1
type: ProteinReference
xref: Reference/UniProt P53665
organism: Arabidopsis thaliana

Reference/UniProt Q941A6
type: UnificationXref
id: Q941A6
db: UniProt

Reference/UniProt Q94JS0
type: UnificationXref
id: Q94JS0
db: UniProt

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
type: ProteinReference
xref: Reference/UniProt Q9LHI0
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
type: ProteinReference
xref: Reference/UniProt Q9FLX7
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9
type: ProteinReference
xref: Reference/UniProt Q9SK66
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A
type: ProteinReference
xref: Reference/UniProt Q9SQT4
organism: Arabidopsis thaliana

Electron
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Electron

NADH dehydrogenase [ubiquinone] flavoprotein 2
type: ProteinReference
xref: Reference/UniProt O22769
organism: Arabidopsis thaliana

Reference/UniProt Q941A0
type: UnificationXref
id: Q941A0
db: UniProt

NADH dehydrogenase [ubiquinone] flavoprotein 1
type: ProteinReference
xref: Reference/UniProt Q9FNN5
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
type: ProteinReference
xref: Reference/UniProt Q9FIJ2
organism: Arabidopsis thaliana

Compound/PW C000721 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NAD
stoichiometric coefficient: 1.0

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
type: ProteinReference
xref: Reference/UniProt Q9C9Z5
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] flavoprotein 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] flavoprotein 1

Electron
type: SmallMoleculeReference

Protein/Generic332 Mitochondrial Inner Membrane/Stoichiometry/4.0
type: Stoichiometry
physical entity: oxidized c-type cytochrome
stoichiometric coefficient: 4.0

Reference/KEGG Compound C00009
type: UnificationXref
id: C00009
db: KEGG Compound

Reference/KEGG Compound C00008
type: UnificationXref
id: C00008
db: KEGG Compound

Reference/UniProt Q9FGI6
type: UnificationXref
id: Q9FGI6
db: UniProt

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A
type: ProteinReference
xref: Reference/UniProt Q8RWA7
organism: Arabidopsis thaliana

Reference/KEGG Compound C00007
type: UnificationXref
id: C00007
db: KEGG Compound

NADH-ubiquinone oxidoreductase chain 2
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 2

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
type: ProteinReference
xref: Reference/UniProt Q9M9M9
organism: Arabidopsis thaliana

Compound/PW C000088 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Fumaric acid
stoichiometric coefficient: 1.0

Reference/UniProt P60620
type: UnificationXref
id: P60620
db: UniProt

succinate dehydrogenase subunit 6
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase subunit 6

Reference/KEGG Compound C00122
type: UnificationXref
id: C00122
db: KEGG Compound

cytochrome c oxidase assembly protein subunit 11
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase assembly protein subunit 11

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Reference/HMDB HMDB0001429
type: UnificationXref
id: HMDB0001429
db: HMDB

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

Reference/KEGG Compound C00004
type: UnificationXref
id: C00004
db: KEGG Compound

Reference/ChEBI CHEBI 18367
type: UnificationXref
id: CHEBI:18367
db: ChEBI

Reference/KEGG Compound C00003
type: UnificationXref
id: C00003
db: KEGG Compound

Reference/ChemSpider 1032
type: UnificationXref
id: 1032
db: ChemSpider

Reference/KEGG Compound C00002
type: UnificationXref
id: C00002
db: KEGG Compound

cytochrome c oxidase assembly protein subunit 17
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase assembly protein subunit 17

Reference/GENE ONTOLOGY GO 0005759
type: UnificationXref
id: GO:0005759
db: GENE ONTOLOGY

Mitochondrial Inner Membrane
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005743

succinate dehydrogenase subunit 5
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase subunit 5

succinate dehydrogenase subunit 3-1
type: ProteinReference
xref: Reference/UniProt P0DKI0
organism: Arabidopsis thaliana

succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
type: ProteinReference
xref: Reference/UniProt Q8LBZ7
organism: Arabidopsis thaliana

succinate dehydrogenase subunit 5
type: ProteinReference
xref: Reference/UniProt Q9SX77
organism: Arabidopsis thaliana

succinate dehydrogenase subunit 4
type: ProteinReference
xref: Reference/UniProt Q941A0
organism: Arabidopsis thaliana

Fumaric acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000134
xref: Reference/ChemSpider 10197150
xref: Reference/CAS 110-17-8
xref: Reference/PubChem-compound 21883788
xref: Reference/KEGG Compound C00122
xref: Reference/BioCyc FUM
xref: Reference/ChEBI CHEBI 18012
chemical formula: C4H4O4
molecular weight: 116.010956
structure: ChemicalStructure/PW C000088

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
type: ProteinReference
xref: Reference/UniProt Q945M1
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
type: ProteinReference
xref: Reference/UniProt Q9SKC9
organism: Arabidopsis thaliana

an ubiquinol
type: SmallMoleculeReference

Reference/UniProt O64886
type: UnificationXref
id: O64886
db: UniProt

ubiquinone
type: SmallMoleculeReference

succinate dehydrogenase [ubiquinone] flavoprotein subunit 1
type: ProteinReference
xref: Reference/UniProt O82663
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A
type: ProteinReference
xref: Reference/UniProt Q9M9B4
organism: Arabidopsis thaliana

F-type H+-transporting ATPase subunit alpha
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit alpha

succinate dehydrogenase subunit 6
type: ProteinReference
xref: Reference/UniProt Q941A6
organism: Arabidopsis thaliana

Adenosine diphosphate
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Adenosine diphosphate

succinate dehydrogenase subunit 8
type: ProteinReference
xref: Reference/UniProt Q9SKE0
organism: Arabidopsis thaliana

succinate dehydrogenase subunit 7A
type: ProteinReference
xref: Reference/UniProt Q9C5E8
organism: Arabidopsis thaliana

Reference/ChEBI CHEBI 15741
type: UnificationXref
id: CHEBI:15741
db: ChEBI

NAD
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15846
xref: Reference/HMDB HMDB0000902
xref: Reference/CAS 53-84-9
xref: Reference/KEGG Compound C00003
xref: Reference/PubChem-compound 5893
xref: Reference/BioCyc NAD
xref: Reference/ChemSpider 5682
chemical formula: C21H27N7O14P2
molecular weight: 663.10913
structure: ChemicalStructure/PW C000721

Reference/UniProt Q9FIJ2
type: UnificationXref
id: Q9FIJ2
db: UniProt

F-type ATPase (Mitochondria)
type: Complex
cellular location: Mitochondrial Inner Membrane
component: F-type H+-transporting ATPase subunit gamma
component: F-type H+-transporting ATPase subunit epsilon
component: F-type H+-transporting ATPase subunit c
component: F-type H+-transporting ATPase subunit delta
component: F-type H+-transporting ATPase subunit a
component: F-type H+-transporting ATPase subunit beta
component: F-type H+-transporting ATPase subunit d
component: F-type H+-transporting ATPase subunit alpha
component: F-type H+-transporting ATPase subunit O

Reference/HMDB HMDB0000902
type: UnificationXref
id: HMDB0000902
db: HMDB

F-type H+-transporting ATPase subunit beta
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit beta

Reference/UniProt Q8RWA7
type: UnificationXref
id: Q8RWA7
db: UniProt

Reference/PubChem-compound 1110
type: UnificationXref
id: 1110
db: PubChem-compound

Oxygen
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Oxygen

Hydrogen Ion
type: SmallMolecule
cellular location: Mitochondrial Matrix
entity reference: Hydrogen Ion

Compound/PW C000174 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Succinic acid
stoichiometric coefficient: 1.0

Reference/UniProt Q8LBZ7
type: UnificationXref
id: Q8LBZ7
db: UniProt

ubiquinol-cytochrome c oxidoreductase
type: Complex
cellular location: Mitochondrial Inner Membrane
component: ubiquinol-cytochrome c reductase cytochrome b subunit
component: ubiquinol-cytochrome c reductase cytochrome c1 subunit
component: ubiquinol-cytochrome c reductase subunit 7-1
component: ubiquinol-cytochrome c reductase iron-sulfur subunit

NADH
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001487
xref: Reference/CAS 58-68-4
xref: Reference/PubChem-compound 439153
xref: Reference/BioCyc NADH
xref: Reference/ChemSpider 388299
xref: Reference/KEGG Compound C00004
xref: Reference/ChEBI CHEBI 16908
chemical formula: C21H29N7O14P2
molecular weight: 665.12476
structure: ChemicalStructure/PW C001144

NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A

Reference/UniProt P92514
type: UnificationXref
id: P92514
db: UniProt

Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/4.0
type: Stoichiometry
physical entity: Electron
stoichiometric coefficient: 4.0

Reference/PubChem-compound 5957
type: UnificationXref
id: 5957
db: PubChem-compound

Reference/GENE ONTOLOGY GO 0005743
type: UnificationXref
id: GO:0005743
db: GENE ONTOLOGY

Reference/UniProt Q9SQT4
type: UnificationXref
id: Q9SQT4
db: UniProt

cytochrome c oxidase subunit 5b-1
type: ProteinReference
xref: Reference/UniProt Q9LW15
organism: Arabidopsis thaliana

protoheme IX farnesyltransferase
type: ProteinReference
xref: Reference/UniProt O64886
organism: Arabidopsis thaliana

Reference/UniProt P93285
type: UnificationXref
id: P93285
db: UniProt

Reference/UniProt Q8GWR0
type: UnificationXref
id: Q8GWR0
db: UniProt

cytochrome c oxidase subunit 6a
type: ProteinReference
xref: Reference/UniProt Q9T070
organism: Arabidopsis thaliana

Succinic acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000254
xref: Reference/CAS 110-15-6
xref: Reference/ChEBI CHEBI 15741
xref: Reference/KEGG Compound C00042
xref: Reference/ChemSpider 1078
xref: Reference/PubChem-compound 1110
xref: Reference/BioCyc SUC
chemical formula: C4H6O4
molecular weight: 118.02661
structure: ChemicalStructure/PW C000174

cytochrome c oxidase subunit 1
type: ProteinReference
xref: Reference/UniProt P60620
organism: Arabidopsis thaliana

cytochrome c oxidase subunit 3
type: ProteinReference
xref: Reference/UniProt P92514
organism: Arabidopsis thaliana

cytochrome c oxidase subunit 2
type: ProteinReference
xref: Reference/UniProt P93285
organism: Arabidopsis thaliana

cytochrome c oxidase assembly protein subunit 11
type: ProteinReference
xref: Reference/UniProt Q8GWR0
organism: Arabidopsis thaliana

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

cytochrome c oxidase subunit 6b-1
type: ProteinReference
xref: Reference/UniProt Q9S7L9
organism: Arabidopsis thaliana

Adenosine triphosphate
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Adenosine triphosphate

NADH dehydrogenase [ubiquinone] iron-sulfur protein 2
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2

cytochrome c oxidase assembly protein subunit 17
type: ProteinReference
xref: Reference/UniProt Q9LJQ9
organism: Arabidopsis thaliana

cytochrome c oxidase assembly protein subunit 15
type: ProteinReference
organism: Arabidopsis thaliana

Compound/PW C000414 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 1.0

cytochrome c oxidase assembly protein subunit 15
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase assembly protein subunit 15

Water
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Water

oxidized c-type cytochrome
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: oxidized c-type cytochrome

Reference/CAS 56-65-5
type: UnificationXref
id: 56-65-5
db: CAS

Reference/PathWhiz PW012955
type: UnificationXref
id: PW012955
db: PathWhiz

Reference/CAS 53-84-9
type: UnificationXref
id: 53-84-9
db: CAS

Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/4.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 4.0

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

Reaction48108
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001144 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C000721 Mitochondrial Inner Membrane/Stoichiometry/1.0
right: NAD
right: Hydrogen Ion
right: Electron
spontaneous: false
left: NADH
name: NADH → 2 Electron + Hydrogen Ion + NAD
conversion direction: LEFT_TO_RIGHT

Reference/UniProt P0DKI0
type: UnificationXref
id: P0DKI0
db: UniProt

1.6.5.3
type: BiochemicalReaction
participant stoichiometry: Compound/PW C041100 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/Generic163 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic162 Mitochondrial Inner Membrane/Stoichiometry/1.0
right: an ubiquinol
spontaneous: false
EC number: 1.6.5.3
left: Hydrogen Ion
left: ubiquinone
left: Electron
name: 2 Electron + 2 Hydrogen Ion + ubiquinone → an ubiquinol
conversion direction: LEFT_TO_RIGHT

Adenosine diphosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00008
xref: Reference/PubChem-compound 6022
xref: Reference/ChemSpider 5800
xref: Reference/CAS 58-64-0
xref: Reference/BioCyc ADP
xref: Reference/ChEBI CHEBI 16761
xref: Reference/HMDB HMDB0001341
chemical formula: C10H15N5O10P2
molecular weight: 427.02942
structure: ChemicalStructure/PW C001034

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A

F-type H+-transporting ATPase subunit c
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit c

F-type H+-transporting ATPase subunit beta
type: ProteinReference
xref: Reference/UniProt P83483
organism: Arabidopsis thaliana

F-type H+-transporting ATPase subunit alpha
type: ProteinReference
xref: Reference/UniProt P92549
organism: Arabidopsis thaliana

ubiquinol-cytochrome c reductase cytochrome c1 subunit
type: ProteinReference
xref: Reference/UniProt Q9LK29
organism: Arabidopsis thaliana

cytochrome c oxidase subunit 3
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase subunit 3

Reference/UniProt P93298
type: UnificationXref
id: P93298
db: UniProt

ubiquinol-cytochrome c reductase cytochrome b subunit
type: ProteinReference
xref: Reference/UniProt P42792
organism: Arabidopsis thaliana

ubiquinol-cytochrome c reductase iron-sulfur subunit
type: ProteinReference
xref: Reference/UniProt Q94JS0
organism: Arabidopsis thaliana

ubiquinol-cytochrome c reductase subunit 7-1
type: ProteinReference
xref: Reference/UniProt Q9SUU5
organism: Arabidopsis thaliana

protoheme IX farnesyltransferase
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: protoheme IX farnesyltransferase

ChemicalStructure/PW C000721
type: ChemicalStructure
structure format: SMILES

Reference/BioCyc CPD-8587
type: UnificationXref
id: CPD-8587
db: BioCyc

Reference/UniProt P60497
type: UnificationXref
id: P60497
db: UniProt

Reference/UniProt Q9LW15
type: UnificationXref
id: Q9LW15
db: UniProt

NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Reference/ChemSpider 5682
type: UnificationXref
id: 5682
db: ChemSpider

ChemicalStructure/PW C001144
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000134
type: UnificationXref
id: HMDB0000134
db: HMDB

Reference/HMDB HMDB0000254
type: UnificationXref
id: HMDB0000254
db: HMDB

Reference/UniProt P92533
type: UnificationXref
id: P92533
db: UniProt

ChemicalStructure/PW C000174
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)CCC(O)=O

F-type H+-transporting ATPase subunit epsilon
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit epsilon

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7

Oxidative Phosphorylation
type: Pathway
pathway order: PathwayTransport/229081
pathway order: PathwayEnzymeReaction/229082
pathway order: PathwayEnzymeReaction/229078
pathway order: PathwayEnzymeReaction/229079
pathway order: PathwayEnzymeReaction/229076
pathway order: PathwayEnzymeReaction/229077
pathway order: PathwayEnzymeReaction/229074
pathway order: PathwayEnzymeReaction/229075
pathway order: PathwayEnzymeReaction/229072
pathway order: PathwayEnzymeReaction/229073
pathway component: ReactionCatalysis38236
pathway component: ReactionCatalysis38235
pathway component: ReactionCatalysis38238
pathway component: Reaction48110
pathway component: ReactionCatalysis38237
pathway component: Reaction48111
pathway component: Reaction48112
pathway component: ReactionCatalysis38239
pathway component: Reaction48113
pathway component: Reaction48114
pathway component: Reaction48115
pathway component: Reaction48116
pathway component: ReactionCatalysis38241
pathway component: ReactionCatalysis38240
pathway component: Reaction48108
pathway component: ReactionCatalysis38243
pathway component: 1.6.5.3
pathway component: ReactionCatalysis38242
pathway component: Transport906
xref: Reference/SMPDB SMP0012092
xref: Reference/PathWhiz PW012955
organism: Arabidopsis thaliana

Mitochondrial Matrix
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005759

cytochrome c oxidase subunit 6a
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase subunit 6a

Reference/HMDB HMDB0001341
type: UnificationXref
id: HMDB0001341
db: HMDB

Reference/UniProt Q9SK66
type: UnificationXref
id: Q9SK66
db: UniProt

Reference/UniProt P83483
type: UnificationXref
id: P83483
db: UniProt

Reference/KEGG Compound C00042
type: UnificationXref
id: C00042
db: KEGG Compound

Fumaric acid
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Fumaric acid

cytochrome c oxidase subunit 2
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase subunit 2

Reference/ChemSpider 1078
type: UnificationXref
id: 1078
db: ChemSpider

ReactionCatalysis38241
type: Catalysis
controller: cytochrome c oxidase
controlled: Reaction48114
control type: ACTIVATION

ReactionCatalysis38240
type: Catalysis
controller: ubiquinol-cytochrome c oxidoreductase
controlled: Reaction48113
control type: ACTIVATION

ReactionCatalysis38243
type: Catalysis
controller: F-type ATPase (Mitochondria)
controlled: Reaction48116
control type: ACTIVATION

ReactionCatalysis38242
type: Catalysis
controller: cytochrome c oxidase
controlled: Reaction48115
control type: ACTIVATION

ChemicalStructure/PW C001034
type: ChemicalStructure
structure format: SMILES

NADH dehydrogenase [ubiquinone] iron-sulfur protein 3
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A

Compound/PW C001034 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine diphosphate
stoichiometric coefficient: 1.0

an ubiquinol
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: an ubiquinol

Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Reference/UniProt P92549
type: UnificationXref
id: P92549
db: UniProt

F-type H+-transporting ATPase subunit a
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit a

Reference/UniProt O05000
type: UnificationXref
id: O05000
db: UniProt

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9

Reference/ChemSpider 10197150
type: UnificationXref
id: 10197150
db: ChemSpider

Reference/ChEBI CHEBI 15422
type: UnificationXref
id: CHEBI:15422
db: ChEBI

NADH dehydrogenase complex
type: Complex
cellular location: Mitochondrial Inner Membrane
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9
component: NADH-ubiquinone oxidoreductase chain 4
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
component: NADH-ubiquinone oxidoreductase chain 5
component: NADH-ubiquinone oxidoreductase chain 6
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A
component: NADH dehydrogenase [ubiquinone] 1 alpha/beta subcomplex 1
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
component: NADH-ubiquinone oxidoreductase chain 3
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A
component: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
component: NADH-ubiquinone oxidoreductase chain 1
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
component: NADH dehydrogenase [ubiquinone] flavoprotein 1
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2
component: NADH-ubiquinone oxidoreductase chain 2
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
component: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3
component: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A
component: NADH dehydrogenase [ubiquinone] flavoprotein 2
component: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A
component: NADH-ubiquinone oxidoreductase chain 4L
component: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4

Reference/UniProt Q9SKC9
type: UnificationXref
id: Q9SKC9
db: UniProt

Reference/BioCyc FUM
type: UnificationXref
id: FUM
db: BioCyc

Arabidopsis thaliana
type: BioSource
xref: Reference/TAXONOMY 3702

Reference/UniProt Q9S7L9
type: UnificationXref
id: Q9S7L9
db: UniProt

Reference/UniProt P60112
type: UnificationXref
id: P60112
db: UniProt

Reference/ChemSpider 388299
type: UnificationXref
id: 388299
db: ChemSpider

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

F-type H+-transporting ATPase subunit d
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit d

Reference/UniProt Q04614
type: UnificationXref
id: Q04614
db: UniProt

Reference/ChEBI CHEBI 18012
type: UnificationXref
id: CHEBI:18012
db: ChEBI

Reference/HMDB HMDB0001487
type: UnificationXref
id: HMDB0001487
db: HMDB

Oxygen
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001377
xref: Reference/ChemSpider 952
xref: Reference/KEGG Compound C00007
xref: Reference/ChEBI CHEBI 15379
xref: Reference/PubChem-compound 977
xref: Reference/BioCyc CPD-6641
xref: Reference/CAS 7782-44-7
chemical formula: O2
molecular weight: 31.98983
structure: ChemicalStructure/PW C001065

NADH-ubiquinone oxidoreductase chain 3
type: ProteinReference
xref: Reference/UniProt P92533
organism: Arabidopsis thaliana

Reference/UniProt P92558
type: UnificationXref
id: P92558
db: UniProt

NADH-ubiquinone oxidoreductase chain 2
type: ProteinReference
xref: Reference/UniProt O05000
organism: Arabidopsis thaliana

NADH-ubiquinone oxidoreductase chain 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 1

NADH-ubiquinone oxidoreductase chain 4
type: ProteinReference
xref: Reference/UniProt P93313
organism: Arabidopsis thaliana

NADH-ubiquinone oxidoreductase chain 1
type: ProteinReference
xref: Reference/UniProt P92558
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7

NADH dehydrogenase [ubiquinone] iron-sulfur protein 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1

Reference/UniProt Q9M9B4
type: UnificationXref
id: Q9M9B4
db: UniProt

Reference/UniProt O82663
type: UnificationXref
id: O82663
db: UniProt

Adenosine triphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15422
xref: Reference/PubChem-compound 5957
xref: Reference/HMDB HMDB0000538
xref: Reference/CAS 56-65-5
xref: Reference/ChemSpider 5742
xref: Reference/BioCyc ATP
xref: Reference/KEGG Compound C00002
chemical formula: C10H16N5O13P3
molecular weight: 506.99576
structure: ChemicalStructure/PW C000414

cytochrome c oxidase
type: Complex
cellular location: Mitochondrial Inner Membrane
component: cytochrome c oxidase subunit 5b-1
component: protoheme IX farnesyltransferase
component: cytochrome c oxidase assembly protein subunit 15
component: cytochrome c oxidase assembly protein subunit 17
component: cytochrome c oxidase assembly protein subunit 11
component: cytochrome c oxidase subunit 6b-1
component: cytochrome c oxidase subunit 1
component: cytochrome c oxidase subunit 2
component: cytochrome c oxidase subunit 3
component: cytochrome c oxidase subunit 6a

succinate dehydrogenase subunit 4
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase subunit 4

Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 2.0

Reference/ChEBI CHEBI 16761
type: UnificationXref
id: CHEBI:16761
db: ChEBI

Reference/CAS 7782-44-7
type: UnificationXref
id: 7782-44-7
db: CAS

succinate dehydrogenase subunit 7A
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase subunit 7A

Reference/HMDB HMDB0001377
type: UnificationXref
id: HMDB0001377
db: HMDB

F-type H+-transporting ATPase subunit gamma
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: F-type H+-transporting ATPase subunit gamma

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7
type: ProteinReference
xref: Reference/UniProt Q42577
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] iron-sulfur protein 6
type: ProteinReference
xref: Reference/UniProt Q9M9M6
organism: Arabidopsis thaliana

Reference/UniProt Q9SKE0
type: UnificationXref
id: Q9SKE0
db: UniProt

NADH dehydrogenase [ubiquinone] iron-sulfur protein 3
type: ProteinReference
xref: Reference/UniProt Q95748
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] iron-sulfur protein 2
type: ProteinReference
xref: Reference/UniProt P93306
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A
type: ProteinReference
xref: Reference/UniProt O82238
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4
type: ProteinReference
xref: Reference/UniProt Q9FJW4
organism: Arabidopsis thaliana

NADH-ubiquinone oxidoreductase chain 5
type: ProteinReference
xref: Reference/UniProt P29388
organism: Arabidopsis thaliana

NADH-ubiquinone oxidoreductase chain 4L
type: ProteinReference
xref: Reference/UniProt Q04614
organism: Arabidopsis thaliana

NADH dehydrogenase [ubiquinone] iron-sulfur protein 1
type: ProteinReference
xref: Reference/UniProt Q9FGI6
organism: Arabidopsis thaliana

NADH-ubiquinone oxidoreductase chain 6
type: ProteinReference
xref: Reference/UniProt P60497
organism: Arabidopsis thaliana

Protein/Generic333 Mitochondrial Inner Membrane/Stoichiometry/4.0
type: Stoichiometry
physical entity: reduced c-type cytochrome
stoichiometric coefficient: 4.0

Compound/PW C001065 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxygen
stoichiometric coefficient: 1.0

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

ubiquinol-cytochrome c reductase cytochrome b subunit
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: ubiquinol-cytochrome c reductase cytochrome b subunit

Reference/UniProt Q42599
type: UnificationXref
id: Q42599
db: UniProt

Reference/UniProt Q9FNN5
type: UnificationXref
id: Q9FNN5
db: UniProt

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

Reference/ChemSpider 5800
type: UnificationXref
id: 5800
db: ChemSpider

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2

Reference/PubChem-compound 5893
type: UnificationXref
id: 5893
db: PubChem-compound

Reference/UniProt Q96253
type: UnificationXref
id: Q96253
db: UniProt

Reference/UniProt Q96252
type: UnificationXref
id: Q96252
db: UniProt

Reference/UniProt Q9FJW4
type: UnificationXref
id: Q9FJW4
db: UniProt

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Reference/UniProt Q96251
type: UnificationXref
id: Q96251
db: UniProt

Reference/CAS 110-15-6
type: UnificationXref
id: 110-15-6
db: CAS

ubiquinol-cytochrome c reductase cytochrome c1 subunit
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: ubiquinol-cytochrome c reductase cytochrome c1 subunit

ChemicalStructure/PW C001065
type: ChemicalStructure
structure format: SMILES
structure data: O=O

Reference/UniProt Q96250
type: UnificationXref
id: Q96250
db: UniProt

Reference/UniProt P93306
type: UnificationXref
id: P93306
db: UniProt

Hydrogen Ion
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Hydrogen Ion

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 15379
type: UnificationXref
id: CHEBI:15379
db: ChEBI

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Reference/CAS 14265-44-2
type: UnificationXref
id: 14265-44-2
db: CAS

ubiquinol-cytochrome c reductase subunit 7-1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: ubiquinol-cytochrome c reductase subunit 7-1

Compound/PW C040034 Mitochondrial Matrix/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Reference/CAS 58-64-0
type: UnificationXref
id: 58-64-0
db: CAS

ChemicalStructure/PW C000414
type: ChemicalStructure
structure format: SMILES

Reference/UniProt P93313
type: UnificationXref
id: P93313
db: UniProt

NADH-ubiquinone oxidoreductase chain 4L
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 4L

Reference/UniProt Q95748
type: UnificationXref
id: Q95748
db: UniProt

ReactionCatalysis38236
type: Catalysis
controller: NADH dehydrogenase complex
controlled: 1.6.5.3
control type: ACTIVATION

Reference/UniProt Q42577
type: UnificationXref
id: Q42577
db: UniProt

ReactionCatalysis38235
type: Catalysis
controller: NADH dehydrogenase complex
controlled: Reaction48108
control type: ACTIVATION

ReactionCatalysis38238
type: Catalysis
controller: succinate dehydrogenase complex
controlled: Reaction48111
control type: ACTIVATION

ReactionCatalysis38237
type: Catalysis
controller: succinate dehydrogenase complex
controlled: Reaction48110
control type: ACTIVATION

NADH-ubiquinone oxidoreductase chain 5
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: NADH-ubiquinone oxidoreductase chain 5

ReactionCatalysis38239
type: Catalysis
controller: ubiquinol-cytochrome c oxidoreductase
controlled: Reaction48112
control type: ACTIVATION

Reference/UniProt Q9T070
type: UnificationXref
id: Q9T070
db: UniProt

Compound/Generic163 Mitochondrial Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: ubiquinone
stoichiometric coefficient: 1.0

succinate dehydrogenase subunit 8
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase subunit 8

succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

Succinic acid
type: SmallMolecule
cellular location: Mitochondrial Inner Membrane
entity reference: Succinic acid

cytochrome c oxidase subunit 1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: cytochrome c oxidase subunit 1

Reference/BioCyc NADH
type: UnificationXref
id: NADH
db: BioCyc

succinate dehydrogenase subunit 3-1
type: Protein
cellular location: Mitochondrial Inner Membrane
entity reference: succinate dehydrogenase subunit 3-1

Reference/BioCyc NAD
type: UnificationXref
id: NAD
db: BioCyc

Reference/PubChem-compound 1061
type: UnificationXref
id: 1061
db: PubChem-compound

Reference/UniProt P29388
type: UnificationXref
id: P29388
db: UniProt

Reference/PubChem-compound 977
type: UnificationXref
id: 977
db: PubChem-compound

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

ChemicalStructure/PW C000088
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)\C=C\C(O)=O

succinate dehydrogenase complex
type: Complex
cellular location: Mitochondrial Inner Membrane
component: succinate dehydrogenase subunit 7A
component: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1
component: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1
component: succinate dehydrogenase subunit 6
component: succinate dehydrogenase subunit 5
component: succinate dehydrogenase subunit 4
component: succinate dehydrogenase subunit 3-1
component: succinate dehydrogenase subunit 8

Transport906
type: Transport
participant stoichiometry: Compound/PW C040034 Mitochondrial Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Mitochondrial Matrix/Stoichiometry/1.0
right: Hydrogen Ion
spontaneous: false
left: Hydrogen Ion
name: Hydrogen Ion (→) Transport: Arabidopsis thaliana, Cell, Mitochondrial Inner Membrane to Arabidopsis thaliana, Cell, Mitochondrial Matrix
conversion direction: LEFT_TO_RIGHT

Reference/UniProt Q9SUU5
type: UnificationXref
id: Q9SUU5
db: UniProt

Reference/UniProt O82238
type: UnificationXref
id: O82238
db: UniProt

Reference/UniProt Q9C5E8
type: UnificationXref
id: Q9C5E8
db: UniProt