Reference/CAS 7722-84-1
type: UnificationXref
id: 7722-84-1
db: CAS

ReactionCatalysis169967
type: Catalysis
controller: Undecaprenyl pyrophosphate synthetase family protein
controlled: Reaction180112
control type: ACTIVATION

ReactionCatalysis169966
type: Catalysis
controller: geranylgeranyl dehydrogenase
controlled: Reaction180111
control type: ACTIVATION

Cytidine triphosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Cytidine triphosphate

ReactionCatalysis169965
type: Catalysis
controller: Solanesyl diphosphate synthase 2, chloroplastic
controlled: 2.5.1.85
control type: ACTIVATION

ReactionCatalysis169964
type: Catalysis
controller: Geranylgeranyl pyrophosphate synthase 6, mitochondrial
controlled: Reaction180109
control type: ACTIVATION

Reference/BioCyc 3-OH-BENZYL-ALCOHOL
type: UnificationXref
id: 3-OH-BENZYL-ALCOHOL
db: BioCyc

ReactionCatalysis169962
type: Catalysis
controller: Solanesyl diphosphate synthase 2, chloroplastic
controlled: 2.5.1.85
control type: ACTIVATION

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Reference/BioCyc CYS
type: UnificationXref
id: CYS
db: BioCyc

Reference/CAS 6699-20-3
type: UnificationXref
id: 6699-20-3
db: CAS

Reference/HMDB HMDB0003125
type: UnificationXref
id: HMDB0003125
db: HMDB

Reference/PubChem-compound 439153
type: UnificationXref
id: 439153
db: PubChem-compound

Pyrophosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Pyrophosphate

Reference/HMDB HMDB0001185
type: UnificationXref
id: HMDB0001185
db: HMDB

Compound/PW C007216 Lysosome/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesylcysteine
stoichiometric coefficient: 1.0

Compound/PW C040034/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

ReactionCatalysis37672
type: Catalysis
controller: (2E,6E)-farnesyl diphosphate synthase
controlled: 2.5.1.10
control type: ACTIVATION

Reference/KEGG Compound C00448
type: UnificationXref
id: C00448
db: KEGG Compound

Reference/PubChem-compound 6132
type: UnificationXref
id: 6132
db: PubChem-compound

Reference/ChEBI CHEBI 17239
type: UnificationXref
id: CHEBI:17239
db: ChEBI

NAD
type: SmallMolecule
entity reference: NAD

Reference/PubChem-compound 135626581
type: UnificationXref
id: 135626581
db: PubChem-compound

ReactionCatalysis37671
type: Catalysis
controller: geranylpyrophosphate synthase
controlled: 2.5.1.1
control type: ACTIVATION

ReactionCatalysis37670
type: Catalysis
controller: isopentenyl diphosphate isomerase
controlled: 5.3.3.2
control type: ACTIVATION

CDP
type: SmallMolecule
cellular location: Chloroplast
entity reference: CDP

Protein/22850/Stoichiometry/1.0
type: Stoichiometry
physical entity: Protein farnesyltransferase subunit beta
stoichiometric coefficient: 1.0

Reference/ChemSpider 559142
type: UnificationXref
id: 559142
db: ChemSpider

Hydrogen peroxide
type: SmallMolecule
cellular location: Lysosome
entity reference: Hydrogen peroxide

Compound/PW C104756 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Solanesyl pyrophosphate
stoichiometric coefficient: 1.0

geranylpyrophosphate synthase
type: ProteinReference
xref: Reference/UniProt Q5HZ00
organism: Arabidopsis thaliana

isopentenyl diphosphate isomerase
type: ProteinReference
xref: Reference/UniProt Q38929
organism: Arabidopsis thaliana

(2E,6E)-farnesyl diphosphate synthase
type: ProteinReference
xref: Reference/UniProt Q09152
organism: Arabidopsis thaliana

Reference/CAS 63-38-7
type: UnificationXref
id: 63-38-7
db: CAS

2.5.1.58,2.5.1.59
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Protein/Generic557/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000768/Stoichiometry/1.0
participant stoichiometry: Compound/Generic558/Stoichiometry/1.0
right: S-Farnesyl protein
right: Pyrophosphate
spontaneous: false
EC number: 2.5.1.58,2.5.1.59
left: a Protein-cysteine
left: Farnesyl pyrophosphate
name: Farnesyl pyrophosphate + a Protein-cysteine → Pyrophosphate + S-Farnesyl protein
conversion direction: LEFT_TO_RIGHT

S-Adenosylmethionine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 24762165
xref: Reference/KEGG Compound C00019
xref: Reference/ChemSpider 31983
xref: Reference/ChEBI CHEBI 15414
xref: Reference/CAS 485-80-3
xref: Reference/BioCyc S-ADENOSYLMETHIONINE
xref: Reference/HMDB HMDB0001185
chemical formula: C15H23N6O5S
molecular weight: 399.14505
structure: ChemicalStructure/PW C000921

Compound/Generic560 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Protein C-terminal S-farnesyl-L-cysteine methyl ester
stoichiometric coefficient: 1.0

Reaction180112
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000768/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001039/Stoichiometry/1.0
participant stoichiometry: Compound/PW C104758/Stoichiometry/1.0
right: Dehydrodolichol pyrophosphate
right: Pyrophosphate
spontaneous: false
left: Farnesyl pyrophosphate
left: Isopentenyl pyrophosphate
name: Farnesyl pyrophosphate + Isopentenyl pyrophosphate → Dehydrodolichol pyrophosphate + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/PubChem-compound 6281
type: UnificationXref
id: 6281
db: PubChem-compound

Reference/UniProt Q93W54
type: UnificationXref
id: Q93W54
db: UniProt

Compound/PW C001039/Stoichiometry/1.0
type: Stoichiometry
physical entity: Isopentenyl pyrophosphate
stoichiometric coefficient: 1.0

a Protein-cysteine
type: ProteinReference
xref: Reference/KEGG Compound C20119
organism: Arabidopsis thaliana

Reference/ChEBI CHEBI 17561
type: UnificationXref
id: CHEBI:17561
db: ChEBI

Reference/ChEBI CHEBI 16474
type: UnificationXref
id: CHEBI:16474
db: ChEBI

Reference/ChemSpider 952
type: UnificationXref
id: 952
db: ChemSpider

Reference/GENE ONTOLOGY GO 0009507
type: UnificationXref
id: GO:0009507
db: GENE ONTOLOGY

geranylgeranyl dehydrogenase
type: ProteinReference
xref: Reference/UniProt Q9CA67
organism: Arabidopsis thaliana

Reaction180111
type: BiochemicalReaction
participant stoichiometry: Compound/PW C104757 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Chloroplast/Stoichiometry/3.0
participant stoichiometry: Compound/PW C000146 Chloroplast/Stoichiometry/3.0
participant stoichiometry: Compound/PW C000143 Chloroplast/Stoichiometry/3.0
participant stoichiometry: Compound/PW C002145 Chloroplast/Stoichiometry/1.0
right: NADP
right: Phytyl pyrophosphate
spontaneous: false
left: Geranylgeranyl-PP
left: Hydrogen Ion
left: NADPH
name: Geranylgeranyl-PP + 3 Hydrogen Ion + 3 NADPH → 3 NADP + Phytyl pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc GERANYLGERANYL-PP
type: UnificationXref
id: GERANYLGERANYL-PP
db: BioCyc

2.5.1.85
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000170 Chloroplast/Stoichiometry/5.0
participant stoichiometry: Compound/PW C002145 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001039 Chloroplast/Stoichiometry/5.0
participant stoichiometry: Compound/PW C104756 Chloroplast/Stoichiometry/1.0
right: Solanesyl pyrophosphate
right: Pyrophosphate
spontaneous: false
EC number: 2.5.1.85
left: Geranylgeranyl-PP
left: Isopentenyl pyrophosphate
name: Geranylgeranyl-PP + 5 Isopentenyl pyrophosphate → 5 Pyrophosphate + Solanesyl pyrophosphate
conversion direction: LEFT_TO_RIGHT

2.5.1.85
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000993 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C104756 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170 Chloroplast/Stoichiometry/7.0
participant stoichiometry: Compound/PW C001039 Chloroplast/Stoichiometry/7.0
right: Solanesyl pyrophosphate
right: Pyrophosphate
spontaneous: false
EC number: 2.5.1.85
left: Isopentenyl pyrophosphate
left: Geranyl-PP
name: Geranyl-PP + 7 Isopentenyl pyrophosphate → 7 Pyrophosphate + Solanesyl pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/KEGG Compound C00341
type: UnificationXref
id: C00341
db: KEGG Compound

Reference/ChEBI CHEBI 16240
type: UnificationXref
id: CHEBI:16240
db: ChEBI

Reference/ChEBI CHEBI 17211
type: UnificationXref
id: CHEBI:17211
db: ChEBI

Reference/PubChem-compound 445713
type: UnificationXref
id: 445713
db: PubChem-compound

Reaction180109
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000170 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001039 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000768 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C002145 Mitochondrion/Stoichiometry/1.0
right: Geranylgeranyl-PP
right: Pyrophosphate
spontaneous: false
left: Farnesyl pyrophosphate
left: Isopentenyl pyrophosphate
name: Farnesyl pyrophosphate + Isopentenyl pyrophosphate → Geranylgeranyl-PP + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Farnesylcysteine
type: SmallMolecule
entity reference: Farnesylcysteine

Reference/BioCyc PPI
type: UnificationXref
id: PPI
db: BioCyc

Farnesylcysteine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 46926172
xref: Reference/CAS 68000-92-0
xref: Reference/ChEBI CHEBI 62141
xref: Reference/HMDB HMDB0011627
xref: Reference/KEGG Compound C19691
xref: Reference/ChemSpider 4942854
chemical formula: C18H31NO2S
molecular weight: 325.20755
structure: ChemicalStructure/PW C007216

Compound/PW C002145 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: Geranylgeranyl-PP
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0004486
type: UnificationXref
id: HMDB0004486
db: HMDB

Reference/PubChem-compound 7791
type: UnificationXref
id: 7791
db: PubChem-compound

Hydrogen Ion
type: SmallMolecule
entity reference: Hydrogen Ion

Reference/KEGG Compound C00353
type: UnificationXref
id: C00353
db: KEGG Compound

ChemicalStructure/PW C000921
type: ChemicalStructure
structure format: SMILES

Reference/CAS 979-92-0
type: UnificationXref
id: 979-92-0
db: CAS

Reference/KEGG Compound C00235
type: UnificationXref
id: C00235
db: KEGG Compound

Reference/ChEBI CHEBI 16057
type: UnificationXref
id: CHEBI:16057
db: ChEBI

Reference/ChemSpider 392816
type: UnificationXref
id: 392816
db: ChemSpider

Farnesyl cysteine C-terminal methyltransferase
type: Complex
cellular location: Endoplasmic Reticulum Membrane
component: Protein-S-isoprenylcysteine O-methyltransferase A
component: Protein-S-isoprenylcysteine O-methyltransferase B

S-Adenosylhomocysteine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 25246222
xref: Reference/ChemSpider 388301
xref: Reference/BioCyc ADENOSYL-HOMO-CYS
xref: Reference/CAS 979-92-0
xref: Reference/KEGG Compound C00021
xref: Reference/ChEBI CHEBI 16680
xref: Reference/HMDB HMDB0000939
chemical formula: C14H20N6O5S
molecular weight: 384.12158
structure: ChemicalStructure/PW C000749

Farnesylcysteine lyase
type: Protein
cellular location: Lysosome
entity reference: Farnesylcysteine lyase

Reference/KEGG Compound C00112
type: UnificationXref
id: C00112
db: KEGG Compound

Reference/PathWhiz PW122502
type: UnificationXref
id: PW122502
db: PathWhiz

Reference/PathWhiz PW122501
type: UnificationXref
id: PW122501
db: PathWhiz

Geranyl-PP
type: SmallMoleculeReference
xref: Reference/BioCyc GERANYL-PP
xref: Reference/CAS 763-10-0
xref: Reference/KEGG Compound C00341
xref: Reference/PubChem-compound 445995
xref: Reference/HMDB HMDB0001285
xref: Reference/ChEBI CHEBI 17211
xref: Reference/ChemSpider 393471
chemical formula: C10H20O7P2
molecular weight: 314.06842
structure: ChemicalStructure/PW C000993

1.8.3.6
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001065 Lysosome/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000448 Lysosome/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001783 Lysosome/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007216 Lysosome/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Lysosome/Stoichiometry/1.0
participant stoichiometry: Compound/PW C104669 Lysosome/Stoichiometry/1.0
right: 2-trans,6-trans-Farnesal
right: Hydrogen peroxide
right: L-Cysteine
spontaneous: false
EC number: 1.8.3.6
left: Farnesylcysteine
left: Water
left: Oxygen
name: Farnesylcysteine + Oxygen + Water → 2-trans,6-trans-Farnesal + Hydrogen peroxide + L-Cysteine
conversion direction: LEFT_TO_RIGHT

2.7.1.216
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000057 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C002120 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001189 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C104768 Chloroplast/Stoichiometry/1.0
right: CDP
right: Farnesyl phosphate
spontaneous: false
EC number: 2.7.1.216
left: Cytidine triphosphate
left: Farnesol
name: Cytidine triphosphate + Farnesol → CDP + Farnesyl phosphate
conversion direction: LEFT_TO_RIGHT

Reaction180132
type: BiochemicalReaction
participant stoichiometry: Compound/PW C002120/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000721/Stoichiometry/1.0
participant stoichiometry: Compound/PW C104669/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001144/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Farnesol
right: NAD
spontaneous: false
left: NADH
left: 2-trans,6-trans-Farnesal
left: Hydrogen Ion
name: 2-trans,6-trans-Farnesal + Hydrogen Ion + NADH ↔ Farnesol + NAD
conversion direction: REVERSIBLE

Compound/PW C000749 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: S-Adenosylhomocysteine
stoichiometric coefficient: 1.0

5.4.99.-
type: BiochemicalReaction
participant stoichiometry: Compound/PW C007216/Stoichiometry/1.0
participant stoichiometry: Compound/Generic560/Stoichiometry/1.0
right: Farnesylcysteine
spontaneous: false
EC number: 5.4.99.-
left: Protein C-terminal S-farnesyl-L-cysteine methyl ester
name: Protein C-terminal S-farnesyl-L-cysteine methyl ester → Farnesylcysteine
conversion direction: LEFT_TO_RIGHT

Reference/KEGG Compound C00129
type: UnificationXref
id: C00129
db: KEGG Compound

Reference/ChemSpider 1158
type: UnificationXref
id: 1158
db: ChemSpider

Reference/KEGG Compound C00007
type: UnificationXref
id: C00007
db: KEGG Compound

Reference/KEGG Compound C00006
type: UnificationXref
id: C00006
db: KEGG Compound

Reference/UniProt Q38920
type: UnificationXref
id: Q38920
db: UniProt

Dimethylallylpyrophosphate
type: SmallMoleculeReference
xref: Reference/BioCyc CPD-4211
xref: Reference/PubChem-compound 647
xref: Reference/CAS 358-72-5
xref: Reference/ChemSpider 627
xref: Reference/HMDB HMDB0001120
xref: Reference/KEGG Compound C00235
xref: Reference/ChEBI CHEBI 16057
chemical formula: C5H12O7P2
molecular weight: 246.00583
structure: ChemicalStructure/PW C000874

Reference/ChEBI CHEBI 18009
type: UnificationXref
id: CHEBI:18009
db: ChEBI

3.1.1.n2
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001247 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic560 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic559 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
right: Methanol
right: Protein C-terminal S-farnesyl-L-cysteine
spontaneous: false
EC number: 3.1.1.n2
left: Water
left: Protein C-terminal S-farnesyl-L-cysteine methyl ester
name: Protein C-terminal S-farnesyl-L-cysteine methyl ester + Water → Methanol + Protein C-terminal S-farnesyl-L-cysteine
conversion direction: LEFT_TO_RIGHT

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

isopentenyl diphosphate isomerase
type: Protein
cellular location: Chloroplast
entity reference: isopentenyl diphosphate isomerase

Reference/BioCyc CTP
type: UnificationXref
id: CTP
db: BioCyc

NADP
type: SmallMolecule
cellular location: Chloroplast
entity reference: NADP

Reference/ChEBI CHEBI 18361
type: UnificationXref
id: CHEBI:18361
db: ChEBI

Reference/PathWhiz PW122504
type: UnificationXref
id: PW122504
db: PathWhiz

Reference/KEGG Compound C00005
type: UnificationXref
id: C00005
db: KEGG Compound

Farnesyl pyrophosphate
type: SmallMolecule
entity reference: Farnesyl pyrophosphate
name: SubPathwayInput

Reference/KEGG Compound C00004
type: UnificationXref
id: C00004
db: KEGG Compound

Reference/PathWhiz PW122503
type: UnificationXref
id: PW122503
db: PathWhiz

Reference/KEGG Compound C00003
type: UnificationXref
id: C00003
db: KEGG Compound

Compound/PW C104669 Lysosome/Stoichiometry/1.0
type: Stoichiometry
physical entity: 2-trans,6-trans-Farnesal
stoichiometric coefficient: 1.0

Reference/UniProt Q9CA67
type: UnificationXref
id: Q9CA67
db: UniProt

Reference/UniProt Q38929
type: UnificationXref
id: Q38929
db: UniProt

ChemicalStructure/PW C007216
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CSC\C=C(/C)CC\C=C(/C)CCC=C(C)C)C(O)=O

3.4.22.-
type: BiochemicalReaction
participant stoichiometry: Protein/Generic19 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic559 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic558 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
right: Peptide
right: Protein C-terminal S-farnesyl-L-cysteine
spontaneous: false
EC number: 3.4.22.-
left: Water
left: S-Farnesyl protein
name: S-Farnesyl protein + Water → Peptide + Protein C-terminal S-farnesyl-L-cysteine
conversion direction: LEFT_TO_RIGHT

2.1.1.100
type: BiochemicalReaction
participant stoichiometry: Compound/Generic560 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/Generic559 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000921 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000749 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
right: S-Adenosylhomocysteine
right: Protein C-terminal S-farnesyl-L-cysteine methyl ester
spontaneous: false
EC number: 2.1.1.100
left: S-Adenosylmethionine
left: Protein C-terminal S-farnesyl-L-cysteine
name: Protein C-terminal S-farnesyl-L-cysteine + S-Adenosylmethionine → Protein C-terminal S-farnesyl-L-cysteine methyl ester + S-Adenosylhomocysteine
conversion direction: LEFT_TO_RIGHT

Compound/PW C000170 Chloroplast/Stoichiometry/7.0
type: Stoichiometry
physical entity: Pyrophosphate
stoichiometric coefficient: 7.0

Reference/UniProt O22043
type: UnificationXref
id: O22043
db: UniProt

Reference/KEGG Compound C00019
type: UnificationXref
id: C00019
db: KEGG Compound

Isopentenyl pyrophosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Isopentenyl pyrophosphate

NAD
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15846
xref: Reference/HMDB HMDB0000902
xref: Reference/CAS 53-84-9
xref: Reference/KEGG Compound C00003
xref: Reference/PubChem-compound 5893
xref: Reference/BioCyc NAD
xref: Reference/ChemSpider 5682
chemical formula: C21H28N7O14P2
molecular weight: 664.11694
structure: ChemicalStructure/PW C000721

Reference/CAS 763-10-0
type: UnificationXref
id: 763-10-0
db: CAS

Reference/KEGG Compound C00132
type: UnificationXref
id: C00132
db: KEGG Compound

Dimethylallylpyrophosphate
type: SmallMolecule
entity reference: Dimethylallylpyrophosphate
name: SubPathwayOutput

Reference/HMDB HMDB0000902
type: UnificationXref
id: HMDB0000902
db: HMDB

Geranyl-PP
type: SmallMolecule
entity reference: Geranyl-PP
name: SubPathwayInput

Reference/KEGG Compound C00013
type: UnificationXref
id: C00013
db: KEGG Compound

Compound/PW C000993 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Geranyl-PP
stoichiometric coefficient: 1.0

Reference/BioCyc NAD(P)
type: UnificationXref
id: NAD(P)
db: BioCyc

Reference/UniProt Q8GW19
type: UnificationXref
id: Q8GW19
db: UniProt

Unknown
type: ProteinReference
organism: Arabidopsis thaliana

Compound/PW C001039 Chloroplast/Stoichiometry/7.0
type: Stoichiometry
physical entity: Isopentenyl pyrophosphate
stoichiometric coefficient: 7.0

Dehydrodolichol pyrophosphate
type: SmallMolecule
entity reference: Dehydrodolichol pyrophosphate

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Reference/ChemSpider 388301
type: UnificationXref
id: 388301
db: ChemSpider

Reference/ChEBI CHEBI 62141
type: UnificationXref
id: CHEBI:62141
db: ChEBI

Compound/PW C000057 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Cytidine triphosphate
stoichiometric coefficient: 1.0

Reference/KEGG Compound C04506
type: UnificationXref
id: C04506
db: KEGG Compound

Reference/KEGG Compound C04748
type: UnificationXref
id: C04748
db: KEGG Compound

Reference/PubChem-compound 445995
type: UnificationXref
id: 445995
db: PubChem-compound

Reference/KEGG Compound C00021
type: UnificationXref
id: C00021
db: KEGG Compound

Reference/ChemSpider 5653
type: UnificationXref
id: 5653
db: ChemSpider

Reference/CAS 106-28-5
type: UnificationXref
id: 106-28-5
db: CAS

Reference/CAS 53-84-9
type: UnificationXref
id: 53-84-9
db: CAS

Reference/KEGG Compound C00027
type: UnificationXref
id: C00027
db: KEGG Compound

2-trans,6-trans-Farnesal
type: SmallMolecule
cellular location: Lysosome
entity reference: 2-trans,6-trans-Farnesal

Compound/PW C001065 Lysosome/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxygen
stoichiometric coefficient: 1.0

2-trans,6-trans-Farnesal
type: SmallMolecule
entity reference: 2-trans,6-trans-Farnesal

Reference/PubChem-compound 647
type: UnificationXref
id: 647
db: PubChem-compound

Reference/CAS 67-56-1
type: UnificationXref
id: 67-56-1
db: CAS

Reference/PubChem-compound 887
type: UnificationXref
id: 887
db: PubChem-compound

Reference/CAS 372-97-4
type: UnificationXref
id: 372-97-4
db: CAS

Reference/CAS 52-90-4
type: UnificationXref
id: 52-90-4
db: CAS

Reference/KEGG Compound C01126
type: UnificationXref
id: C01126
db: KEGG Compound

Isopentenyl pyrophosphate
type: SmallMolecule
cellular location: Mitochondrion
entity reference: Isopentenyl pyrophosphate

ChemicalStructure/PW C001144
type: ChemicalStructure
structure format: SMILES

Compound/PW C000448 Lysosome/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Cysteine
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0001347
type: UnificationXref
id: HMDB0001347
db: HMDB

Reference/BioCyc HYDROGEN-PEROXIDE
type: UnificationXref
id: HYDROGEN-PEROXIDE
db: BioCyc

ChemicalStructure/PW C000057
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000250
type: UnificationXref
id: HMDB0000250
db: HMDB

ChemicalStructure/PW C000170
type: ChemicalStructure
structure format: SMILES
structure data: [O-]P([O-])(=O)OP([O-])([O-])=O

Reference/BioCyc GERANYL-PP
type: UnificationXref
id: GERANYL-PP
db: BioCyc

geranylgeranyl dehydrogenase
type: Protein
cellular location: Chloroplast
entity reference: geranylgeranyl dehydrogenase

Compound/PW C007216/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesylcysteine
stoichiometric coefficient: 1.0

Farnesylcysteine
type: SmallMolecule
cellular location: Lysosome
entity reference: Farnesylcysteine

Reference/KEGG Compound C05859
type: UnificationXref
id: C05859
db: KEGG Compound

Reference/PubChem-compound 8152
type: UnificationXref
id: 8152
db: PubChem-compound

Compound/PW C104758/Stoichiometry/1.0
type: Stoichiometry
physical entity: Dehydrodolichol pyrophosphate
stoichiometric coefficient: 1.0

CAAX prenyl protease 2
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: CAAX prenyl protease 2

Reference/ChEBI CHEBI 90236
type: UnificationXref
id: CHEBI:90236
db: ChEBI

Reference/ChemSpider 763
type: UnificationXref
id: 763
db: ChemSpider

Compound/PW C000170/Stoichiometry/1.0
type: Stoichiometry
physical entity: Pyrophosphate
stoichiometric coefficient: 1.0

ChemicalStructure/PW C002120
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)=CCC\C(C)=C\CC\C(C)=C\CO

S-Adenosylmethionine
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: S-Adenosylmethionine

CAAX prenyl protease 1 homolog
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: CAAX prenyl protease 1 homolog

Reference/ChemSpider 5902
type: UnificationXref
id: 5902
db: ChemSpider

Farnesyl pyrophosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00448
xref: Reference/HMDB HMDB0000961
xref: Reference/ChemSpider 393270
xref: Reference/ChEBI CHEBI 17407
xref: Reference/CAS 372-97-4
xref: Reference/BioCyc FARNESYL-PP
xref: Reference/PubChem-compound 445713
chemical formula: C15H28O7P2
molecular weight: 382.13104
structure: ChemicalStructure/PW C000768

Peptide
type: ProteinReference
xref: Reference/ChEBI CHEBI 16670
organism: Arabidopsis thaliana

Reference/PubChem-compound 784
type: UnificationXref
id: 784
db: PubChem-compound

Reference/SMPDB SMP0121210
type: UnificationXref
id: SMP0121210
db: SMPDB

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
type: ProteinReference
xref: Reference/UniProt Q9LX33
organism: Arabidopsis thaliana

Compound/PW C001783 Lysosome/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen peroxide
stoichiometric coefficient: 1.0

Solanesyl diphosphate synthase 2, chloroplastic
type: ProteinReference
xref: Reference/UniProt Q76FS5
organism: Arabidopsis thaliana

Reference/BioCyc 2-TRANS6-TRANS-FARNESOL
type: UnificationXref
id: 2-TRANS6-TRANS-FARNESOL
db: BioCyc

Undecaprenyl pyrophosphate synthetase family protein
type: ProteinReference
xref: Reference/UniProt Q8H0V2
organism: Arabidopsis thaliana

SubPathwayInteraction110211
type: Interaction
name: SubPathway110211Reaction
name: SubPathwayReaction
participant: Farnesyl pyrophosphate

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

SubPathwayInteraction110210
type: Interaction
name: SubPathwayReaction
name: SubPathway110210Reaction
participant: Farnesyl pyrophosphate

Compound/PW C001420 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

Water
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Water

Reference/HMDB HMDB0001487
type: UnificationXref
id: HMDB0001487
db: HMDB

Geranylgeranyl pyrophosphate synthase 6, mitochondrial
type: ProteinReference
xref: Reference/UniProt O22043
organism: Arabidopsis thaliana

ChemicalStructure/PW C001247
type: ChemicalStructure
structure format: SMILES
structure data: CO

Reference/KEGG Compound C00063
type: UnificationXref
id: C00063
db: KEGG Compound

Compound/PW C001039 Chloroplast/Stoichiometry/5.0
type: Stoichiometry
physical entity: Isopentenyl pyrophosphate
stoichiometric coefficient: 5.0

Reference/PathWhiz PW015068
type: UnificationXref
id: PW015068
db: PathWhiz

Reference/HMDB HMDB0001120
type: UnificationXref
id: HMDB0001120
db: HMDB

Compound/PW C104757 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Phytyl pyrophosphate
stoichiometric coefficient: 1.0

Reference/BioCyc CPD-4211
type: UnificationXref
id: CPD-4211
db: BioCyc

SubPathwayInteraction110208
type: Interaction
name: SubPathway110208Reaction
name: SubPathwayReaction
participant: Geranyl-PP

SubPathwayInteraction110207
type: Interaction
name: SubPathwayReaction
name: SubPathway110207Reaction
participant: Isopentenyl pyrophosphate

Geranyl-PP
type: SmallMolecule
cellular location: Chloroplast
entity reference: Geranyl-PP

SubPathwayInteraction110204
type: Interaction
name: SubPathway110204Reaction
name: SubPathwayReaction
participant: Dimethylallylpyrophosphate
participant: Isopentenyl pyrophosphate

Compound/PW C001039 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: Isopentenyl pyrophosphate
stoichiometric coefficient: 1.0

Farnesylcysteine lyase
type: ProteinReference
xref: Reference/UniProt P57681
organism: Arabidopsis thaliana

NAD(P)-binding Rossmann-fold superfamily protein
type: ProteinReference
xref: Reference/UniProt B3H6K6
organism: Arabidopsis thaliana

Farnesol kinase, chloroplastic
type: ProteinReference
xref: Reference/UniProt Q67ZM7
organism: Arabidopsis thaliana

Reference/BioCyc FARNESYL-PP
type: UnificationXref
id: FARNESYL-PP
db: BioCyc

CAAX prenyl protease 2
type: ProteinReference
xref: Reference/UniProt Q8GW19
organism: Arabidopsis thaliana

Protein-S-isoprenylcysteine O-methyltransferase A
type: ProteinReference
xref: Reference/UniProt Q9FMW9
organism: Arabidopsis thaliana

Reference/ChEBI CHEBI 18144
type: UnificationXref
id: CHEBI:18144
db: ChEBI

Protein-S-isoprenylcysteine O-methyltransferase B
type: ProteinReference
xref: Reference/UniProt Q93W54
organism: Arabidopsis thaliana

Isoprenylcysteine alpha-carbonyl methylesterase ICME
type: ProteinReference
xref: Reference/UniProt Q94AS5
organism: Arabidopsis thaliana

Reference/HMDB HMDB0001377
type: UnificationXref
id: HMDB0001377
db: HMDB

Protein farnesyltransferase subunit beta
type: ProteinReference
xref: Reference/UniProt Q38920
organism: Arabidopsis thaliana

Reference/KEGG Compound C03461
type: UnificationXref
id: C03461
db: KEGG Compound

Reference/CAS 65-47-4
type: UnificationXref
id: 65-47-4
db: CAS

CAAX prenyl protease 1 homolog
type: ProteinReference
xref: Reference/UniProt Q8RX88
organism: Arabidopsis thaliana

Compound/PW C104669/Stoichiometry/1.0
type: Stoichiometry
physical entity: 2-trans,6-trans-Farnesal
stoichiometric coefficient: 1.0

Protein/Generic19 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Peptide
stoichiometric coefficient: 1.0

Reference/SMPDB SMP0121205
type: UnificationXref
id: SMP0121205
db: SMPDB

Reference/SMPDB SMP0121207
type: UnificationXref
id: SMP0121207
db: SMPDB

Reference/SMPDB SMP0121208
type: UnificationXref
id: SMP0121208
db: SMPDB

Reference/SMPDB SMP0121209
type: UnificationXref
id: SMP0121209
db: SMPDB

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

Reference/ChemSpider 31983
type: UnificationXref
id: 31983
db: ChemSpider

Compound/PW C000874 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Dimethylallylpyrophosphate
stoichiometric coefficient: 1.0

Terpenoid Backbone Biosynthesis
type: Pathway
pathway order: PathwaySubPathway/110211
pathway order: PathwaySubPathway/110210
pathway order: PathwayEnzymeReaction/2125090
pathway order: PathwayEnzymeReaction/2125070
pathway order: PathwayEnzymeReaction/2125092
pathway order: PathwayEnzymeReaction/2125080
pathway order: PathwayEnzymeReaction/2125091
pathway order: PathwayEnzymeReaction/2125072
pathway order: PathwayEnzymeReaction/2125083
pathway order: PathwayEnzymeReaction/2125094
pathway order: PathwayEnzymeReaction/2125082
pathway order: PathwayEnzymeReaction/2125093
pathway order: PathwayEnzymeReaction/2125096
pathway order: PathwayEnzymeReaction/2125084
pathway order: PathwayEnzymeReaction/2125075
pathway order: PathwayEnzymeReaction/2125078
pathway order: PathwayEnzymeReaction/2125089
pathway order: PathwayEnzymeReaction/2125077
pathway order: PathwayEnzymeReaction/2125088
pathway order: PathwaySubPathway/110208
pathway order: PathwaySubPathway/110207
pathway order: PathwaySubPathway/110204
pathway component: 2.5.1.58,2.5.1.59
pathway component: ReactionCatalysis169967
pathway component: ReactionCatalysis169966
pathway component: Reaction180112
pathway component: ReactionCatalysis169965
pathway component: ReactionCatalysis169987
pathway component: ReactionCatalysis169964
pathway component: ReactionCatalysis169986
pathway component: ReactionCatalysis169985
pathway component: ReactionCatalysis169962
pathway component: ReactionCatalysis169982
pathway component: ReactionCatalysis169980
pathway component: 5.3.3.2
pathway component: 2.5.1.1
pathway component: 2.5.1.10
pathway component: 1.8.3.6
pathway component: MEP/DOXP Pathway
pathway component: Mevalonate Pathway
pathway component: Reaction180111
pathway component: 2.7.1.216
pathway component: 2.5.1.85
pathway component: Reaction180132
pathway component: 5.4.99.-
pathway component: ReactionCatalysis37672
pathway component: ReactionCatalysis169978
pathway component: Sesquiterpenoid Biosynthesis
pathway component: ReactionCatalysis169976
pathway component: ReactionCatalysis169975
pathway component: 3.1.1.n2
pathway component: Triterpenoid Biosynthesis
pathway component: ReactionCatalysis169971
pathway component: Reaction180109
pathway component: ReactionCatalysis37671
pathway component: Monoterpenoid Biosynthesis
pathway component: ReactionCatalysis37670
pathway component: 3.4.22.-
pathway component: 2.1.1.100
xref: Reference/SMPDB SMP0121210
xref: Reference/PathWhiz PW122504
organism: Arabidopsis thaliana

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

ChemicalStructure/PW C001065
type: ChemicalStructure
structure format: SMILES
structure data: O=O

ChemicalStructure/PW C001189
type: ChemicalStructure
structure format: SMILES

MEP/DOXP Pathway
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway110204
pathway component: SubPathwayInteraction110204
xref: Reference/PathWhiz PW122502
xref: Reference/SMPDB SMP0121208
name: SubPathway

Mevalonate Pathway
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway110207
pathway component: SubPathwayInteraction110207
xref: Reference/PathWhiz PW122503
xref: Reference/SMPDB SMP0121209
name: SubPathway

Compound/Generic558/Stoichiometry/1.0
type: Stoichiometry
physical entity: S-Farnesyl protein
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

Protein-S-isoprenylcysteine O-methyltransferase A
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Protein-S-isoprenylcysteine O-methyltransferase A

Compound/PW C000874 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: Dimethylallylpyrophosphate
stoichiometric coefficient: 1.0

Protein C-terminal S-farnesyl-L-cysteine methyl ester
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Protein C-terminal S-farnesyl-L-cysteine methyl ester

Reference/PubChem-compound 46926172
type: UnificationXref
id: 46926172
db: PubChem-compound

Reference/PubChem-compound 6176
type: UnificationXref
id: 6176
db: PubChem-compound

Reference/HMDB HMDB0004305
type: UnificationXref
id: HMDB0004305
db: HMDB

NADPH
type: SmallMolecule
cellular location: Chloroplast
entity reference: NADPH

Protein C-terminal S-farnesyl-L-cysteine methyl ester
type: SmallMoleculeReference
xref: Reference/KEGG Compound C04748

Reference/PubChem-compound 644102
type: UnificationXref
id: 644102
db: PubChem-compound

L-Cysteine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000574
xref: Reference/CAS 52-90-4
xref: Reference/KEGG Compound C00097
xref: Reference/BioCyc CYS
xref: Reference/ChemSpider 5653
xref: Reference/PubChem-compound 5862
xref: Reference/ChEBI CHEBI 17561
chemical formula: C3H7NO2S
molecular weight: 121.01975
structure: ChemicalStructure/PW C000448

Reference/ChemSpider 5941
type: UnificationXref
id: 5941
db: ChemSpider

ReactionCatalysis169987
type: Catalysis
controller: Farnesol kinase, chloroplastic
controlled: 2.7.1.216
control type: ACTIVATION

ReactionCatalysis169986
type: Catalysis
controller: NAD(P)-binding Rossmann-fold superfamily protein
controlled: Reaction180132
control type: ACTIVATION

ReactionCatalysis169985
type: Catalysis
controller: Farnesylcysteine lyase
controlled: 1.8.3.6
control type: ACTIVATION

ChemicalStructure/PW C001039
type: ChemicalStructure
structure format: SMILES
structure data: CC(=C)CCOP(O)(=O)OP(O)(O)=O

Reference/KEGG Compound C05427
type: UnificationXref
id: C05427
db: KEGG Compound

ReactionCatalysis169982
type: Catalysis
controller: Unknown
controlled: 5.4.99.-
control type: ACTIVATION

Reference/KEGG Compound C00097
type: UnificationXref
id: C00097
db: KEGG Compound

ReactionCatalysis169980
type: Catalysis
controller: Isoprenylcysteine alpha-carbonyl methylesterase ICME
controlled: 3.1.1.n2
control type: ACTIVATION

Reference/PubChem-compound 22833512
type: UnificationXref
id: 22833512
db: PubChem-compound

Reference/PubChem-compound 25246222
type: UnificationXref
id: 25246222
db: PubChem-compound

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

Hydrogen peroxide
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0003125
xref: Reference/PubChem-compound 784
xref: Reference/ChemSpider 763
xref: Reference/CAS 7722-84-1
xref: Reference/BioCyc HYDROGEN-PEROXIDE
xref: Reference/ChEBI CHEBI 16240
xref: Reference/KEGG Compound C00027
chemical formula: H2O2
molecular weight: 34.005478
structure: ChemicalStructure/PW C001783

Oxygen
type: SmallMolecule
cellular location: Lysosome
entity reference: Oxygen

Reference/HMDB HMDB0001285
type: UnificationXref
id: HMDB0001285
db: HMDB

Reference/BioCyc NADH
type: UnificationXref
id: NADH
db: BioCyc

Reference/BioCyc NAD
type: UnificationXref
id: NAD
db: BioCyc

Reference/UniProt B3H6K6
type: UnificationXref
id: B3H6K6
db: UniProt

ReactionCatalysis169978
type: Catalysis
controller: Farnesyl cysteine C-terminal methyltransferase
controlled: 2.1.1.100
control type: ACTIVATION

Reference/PubChem-compound 977
type: UnificationXref
id: 977
db: PubChem-compound

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

Sesquiterpenoid Biosynthesis
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway110210
pathway component: SubPathwayInteraction110210
xref: Reference/PathWhiz PW122499
xref: Reference/SMPDB SMP0121205
name: SubPathway

ReactionCatalysis169976
type: Catalysis
controller: CAAX prenyl protease 2
controlled: 3.4.22.-
control type: ACTIVATION

ReactionCatalysis169975
type: Catalysis
controller: CAAX prenyl protease 1 homolog
controlled: 3.4.22.-
control type: ACTIVATION

Triterpenoid Biosynthesis
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway110211
pathway component: SubPathwayInteraction110211
xref: Reference/PathWhiz PW122501
xref: Reference/SMPDB SMP0121207
name: SubPathway

Protein/Generic557/Stoichiometry/1.0
type: Stoichiometry
physical entity: a Protein-cysteine
stoichiometric coefficient: 1.0

Compound/PW C000768 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesyl pyrophosphate
stoichiometric coefficient: 1.0

Reference/ChemSpider 627
type: UnificationXref
id: 627
db: ChemSpider

ReactionCatalysis169971
type: Catalysis
controller: Protein farnesyltransferase
controlled: 2.5.1.58,2.5.1.59
control type: ACTIVATION

Compound/PW C001420 Lysosome/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

Reference/ChemSpider 864
type: UnificationXref
id: 864
db: ChemSpider

ChemicalStructure/PW C002145
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000082
type: UnificationXref
id: HMDB0000082
db: HMDB

L-Cysteine
type: SmallMolecule
cellular location: Lysosome
entity reference: L-Cysteine

Reference/ChemSpider 4942854
type: UnificationXref
id: 4942854
db: ChemSpider

Reference/ChemSpider 17215925
type: UnificationXref
id: 17215925
db: ChemSpider

Reference/TAXONOMY 3702
type: UnificationXref
id: 3702
db: TAXONOMY

ChemicalStructure/PW C000448
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CS)C(O)=O

geranylpyrophosphate synthase
type: Protein
cellular location: Mitochondrion
entity reference: geranylpyrophosphate synthase

NADH
type: SmallMolecule
entity reference: NADH

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

ChemicalStructure/PW C001783
type: ChemicalStructure
structure format: SMILES
structure data: OO

Farnesol kinase, chloroplastic
type: Protein
cellular location: Chloroplast
entity reference: Farnesol kinase, chloroplastic

Pyrophosphate
type: SmallMolecule
entity reference: Pyrophosphate

ChemicalStructure/PW C104669
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)=CCC\C(C)=C\CC\C(C)=C\C=O

Reference/CAS 68000-92-0
type: UnificationXref
id: 68000-92-0
db: CAS

Hydrogen Ion
type: SmallMolecule
cellular location: Chloroplast
entity reference: Hydrogen Ion

Methanol
type: SmallMoleculeReference
xref: Reference/ChemSpider 864
xref: Reference/HMDB HMDB0001875
xref: Reference/CAS 67-56-1
xref: Reference/PubChem-compound 887
xref: Reference/BioCyc 3-OH-BENZYL-ALCOHOL
xref: Reference/ChEBI CHEBI 17790
xref: Reference/KEGG Compound C00132
chemical formula: CH4O
molecular weight: 32.026215
structure: ChemicalStructure/PW C001247

Compound/Generic559 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Protein C-terminal S-farnesyl-L-cysteine
stoichiometric coefficient: 1.0

Monoterpenoid Biosynthesis
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway110208
pathway component: SubPathwayInteraction110208
xref: Reference/SMPDB SMP0014204
xref: Reference/PathWhiz PW015068
name: SubPathway

Reference/ChemSpider 393270
type: UnificationXref
id: 393270
db: ChemSpider

Unknown
type: Protein
entity reference: Unknown

Reference/HMDB HMDB0001875
type: UnificationXref
id: HMDB0001875
db: HMDB

Reference/ChEBI CHEBI 15846
type: UnificationXref
id: CHEBI:15846
db: ChEBI

S-Farnesyl protein
type: SmallMoleculeReference
xref: Reference/KEGG Compound C20120

Protein C-terminal S-farnesyl-L-cysteine
type: SmallMoleculeReference
xref: Reference/KEGG Compound C04506

Reference/CAS 53-59-8
type: UnificationXref
id: 53-59-8
db: CAS

Lysosome
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005764

Reference/UniProt Q76FS5
type: UnificationXref
id: Q76FS5
db: UniProt

Reference/CAS 358-72-5
type: UnificationXref
id: 358-72-5
db: CAS

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Compound/Generic558 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: S-Farnesyl protein
stoichiometric coefficient: 1.0

Protein-S-isoprenylcysteine O-methyltransferase B
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Protein-S-isoprenylcysteine O-methyltransferase B

Compound/PW C001039 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Isopentenyl pyrophosphate
stoichiometric coefficient: 1.0

NAD(P)-binding Rossmann-fold superfamily protein
type: Protein
entity reference: NAD(P)-binding Rossmann-fold superfamily protein

Solanesyl diphosphate synthase 2, chloroplastic
type: Protein
cellular location: Chloroplast
entity reference: Solanesyl diphosphate synthase 2, chloroplastic

Reference/UniProt Q9FMW9
type: UnificationXref
id: Q9FMW9
db: UniProt

Compound/PW C104768 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesyl phosphate
stoichiometric coefficient: 1.0

Compound/PW C000993 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: Geranyl-PP
stoichiometric coefficient: 1.0

Protein farnesyltransferase subunit beta
type: Protein
entity reference: Protein farnesyltransferase subunit beta

Reference/ChEBI CHEBI 16908
type: UnificationXref
id: CHEBI:16908
db: ChEBI

Reference/UniProt Q8H0V2
type: UnificationXref
id: Q8H0V2
db: UniProt

Reference/BioCyc ADENOSYL-HOMO-CYS
type: UnificationXref
id: ADENOSYL-HOMO-CYS
db: BioCyc

Reference/CAS 485-80-3
type: UnificationXref
id: 485-80-3
db: CAS

Reference/PubChem-compound 6830
type: UnificationXref
id: 6830
db: PubChem-compound

Reference/PubChem-compound 5862
type: UnificationXref
id: 5862
db: PubChem-compound

Reference/KEGG Compound C04145
type: UnificationXref
id: C04145
db: KEGG Compound

Isoprenylcysteine alpha-carbonyl methylesterase ICME
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Isoprenylcysteine alpha-carbonyl methylesterase ICME

Reference/PathWhiz PW122499
type: UnificationXref
id: PW122499
db: PathWhiz

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
type: Protein
entity reference: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

Undecaprenyl pyrophosphate synthetase family protein
type: Protein
entity reference: Undecaprenyl pyrophosphate synthetase family protein

NADPH
type: SmallMoleculeReference
xref: Reference/CAS 53-57-6
xref: Reference/HMDB HMDB0000221
xref: Reference/PubChem-compound 22833512
xref: Reference/BioCyc NADPH
xref: Reference/ChemSpider 17215925
xref: Reference/KEGG Compound C00005
xref: Reference/ChEBI CHEBI 16474
chemical formula: C21H30N7O17P3
molecular weight: 745.0911
structure: ChemicalStructure/PW C000146

Mitochondrion
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005739

NADP
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00006
xref: Reference/CAS 53-59-8
xref: Reference/BioCyc NAD(P)
xref: Reference/HMDB HMDB0000217
xref: Reference/ChEBI CHEBI 18009
xref: Reference/PubChem-compound 5886
xref: Reference/ChemSpider 5675
chemical formula: C21H29N7O17P3
molecular weight: 744.08325
structure: ChemicalStructure/PW C000143

Reference/BioCyc NADPH
type: UnificationXref
id: NADPH
db: BioCyc

Compound/PW C000146 Chloroplast/Stoichiometry/3.0
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 3.0

Isopentenyl pyrophosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00129
xref: Reference/ChemSpider 1158
xref: Reference/PubChem-compound 1195
xref: Reference/CAS 358-71-4
xref: Reference/HMDB HMDB0001347
xref: Reference/ChEBI CHEBI 16584
chemical formula: C5H12O7P2
molecular weight: 246.00583
structure: ChemicalStructure/PW C001039

Reference/BioCyc CPD-6641
type: UnificationXref
id: CPD-6641
db: BioCyc

Reference/HMDB HMDB0000574
type: UnificationXref
id: HMDB0000574
db: HMDB

Reference/CAS 58-68-4
type: UnificationXref
id: 58-68-4
db: CAS

Compound/PW C002120 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesol
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0001546
type: UnificationXref
id: HMDB0001546
db: HMDB

Reference/HMDB HMDB0000217
type: UnificationXref
id: HMDB0000217
db: HMDB

Solanesyl pyrophosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Solanesyl pyrophosphate

Reference/UniProt P57681
type: UnificationXref
id: P57681
db: UniProt

Reference/GENE ONTOLOGY GO 0005764
type: UnificationXref
id: GO:0005764
db: GENE ONTOLOGY

2-trans,6-trans-Farnesal
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15894
xref: Reference/KEGG Compound C03461
xref: Reference/PubChem-compound 6281
chemical formula: C15H24O
molecular weight: 220.18271
structure: ChemicalStructure/PW C104669

Reference/ChEBI CHEBI 15894
type: UnificationXref
id: CHEBI:15894
db: ChEBI

Compound/PW C040034 Chloroplast/Stoichiometry/3.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 3.0

Reference/ChEBI CHEBI 15414
type: UnificationXref
id: CHEBI:15414
db: ChEBI

Reference/PubChem-compound 447277
type: UnificationXref
id: 447277
db: PubChem-compound

Reference/SMPDB SMP0014204
type: UnificationXref
id: SMP0014204
db: SMPDB

Dimethylallylpyrophosphate
type: SmallMolecule
cellular location: Mitochondrion
entity reference: Dimethylallylpyrophosphate

Protein C-terminal S-farnesyl-L-cysteine
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Protein C-terminal S-farnesyl-L-cysteine

Geranylgeranyl-PP
type: SmallMolecule
cellular location: Mitochondrion
entity reference: Geranylgeranyl-PP

ChemicalStructure/PW C000143
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000221
type: UnificationXref
id: HMDB0000221
db: HMDB

Geranylgeranyl-PP
type: SmallMoleculeReference
xref: Reference/CAS 6699-20-3
xref: Reference/ChemSpider 394418
xref: Reference/PubChem-compound 447277
xref: Reference/KEGG Compound C00353
xref: Reference/BioCyc GERANYLGERANYL-PP
xref: Reference/ChEBI CHEBI 48861
xref: Reference/HMDB HMDB0004486
chemical formula: C20H36O7P2
molecular weight: 450.19363
structure: ChemicalStructure/PW C002145

ChemicalStructure/PW C000146
type: ChemicalStructure
structure format: SMILES

Compound/PW C000170 Mitochondrion/Stoichiometry/1.0
type: Stoichiometry
physical entity: Pyrophosphate
stoichiometric coefficient: 1.0

Reference/UniProt Q67ZM7
type: UnificationXref
id: Q67ZM7
db: UniProt

Compound/PW C000768/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesyl pyrophosphate
stoichiometric coefficient: 1.0

Reference/BioCyc CDP
type: UnificationXref
id: CDP
db: BioCyc

(2E,6E)-farnesyl diphosphate synthase
type: Protein
cellular location: Mitochondrion
entity reference: (2E,6E)-farnesyl diphosphate synthase

Reference/ChEBI CHEBI 16619
type: UnificationXref
id: CHEBI:16619
db: ChEBI

Reference/ChEBI CHEBI 48861
type: UnificationXref
id: CHEBI:48861
db: ChEBI

S-Farnesyl protein
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: S-Farnesyl protein

Reference/ChemSpider 393471
type: UnificationXref
id: 393471
db: ChemSpider

Reference/CAS 53-57-6
type: UnificationXref
id: 53-57-6
db: CAS

Reference/ChemSpider 394418
type: UnificationXref
id: 394418
db: ChemSpider

S-Farnesyl protein
type: SmallMolecule
entity reference: S-Farnesyl protein

Reference/BioCyc S-ADENOSYLMETHIONINE
type: UnificationXref
id: S-ADENOSYLMETHIONINE
db: BioCyc

Pyrophosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 644102
xref: Reference/BioCyc PPI
xref: Reference/ChemSpider 559142
xref: Reference/ChEBI CHEBI 18361
xref: Reference/HMDB HMDB0000250
xref: Reference/CAS 14000-31-8
xref: Reference/KEGG Compound C00013
chemical formula: O7P2
molecular weight: 173.91193
structure: ChemicalStructure/PW C000170

NADH
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001487
xref: Reference/CAS 58-68-4
xref: Reference/PubChem-compound 439153
xref: Reference/BioCyc NADH
xref: Reference/ChemSpider 388299
xref: Reference/KEGG Compound C00004
xref: Reference/ChEBI CHEBI 16908
chemical formula: C21H29N7O14P2
molecular weight: 665.12476
structure: ChemicalStructure/PW C001144

Compound/PW C002145 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: Geranylgeranyl-PP
stoichiometric coefficient: 1.0

Cytidine triphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 17677
xref: Reference/CAS 65-47-4
xref: Reference/PubChem-compound 6176
xref: Reference/KEGG Compound C00063
xref: Reference/ChemSpider 5941
xref: Reference/HMDB HMDB0000082
xref: Reference/BioCyc CTP
chemical formula: C9H16N3O14P3
molecular weight: 482.9845
structure: ChemicalStructure/PW C000057

Reference/UniProt Q94AS5
type: UnificationXref
id: Q94AS5
db: UniProt

Farnesyl pyrophosphate
type: SmallMolecule
cellular location: Mitochondrion
entity reference: Farnesyl pyrophosphate

Reference/PubChem-compound 445070
type: UnificationXref
id: 445070
db: PubChem-compound

Protein C-terminal S-farnesyl-L-cysteine methyl ester
type: SmallMolecule
entity reference: Protein C-terminal S-farnesyl-L-cysteine methyl ester

Farnesyl phosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C20121
xref: Reference/PubChem-compound 135626581
xref: Reference/ChEBI CHEBI 90236
chemical formula: C15H27O4P
molecular weight: 302.1647
structure: ChemicalStructure/PW C104768

a Protein-cysteine
type: Protein
entity reference: a Protein-cysteine

Isopentenyl pyrophosphate
type: SmallMolecule
entity reference: Isopentenyl pyrophosphate
name: SubPathwayOutput

Compound/PW C001247 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Methanol
stoichiometric coefficient: 1.0

Farnesol
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0004305
xref: Reference/BioCyc 2-TRANS6-TRANS-FARNESOL
xref: Reference/ChEBI CHEBI 16619
xref: Reference/CAS 106-28-5
xref: Reference/KEGG Compound C01126
xref: Reference/PubChem-compound 445070
xref: Reference/ChemSpider 392816
chemical formula: C15H26O
molecular weight: 222.19836
structure: ChemicalStructure/PW C002120

Compound/PW C002120/Stoichiometry/1.0
type: Stoichiometry
physical entity: Farnesol
stoichiometric coefficient: 1.0

Reference/GENE ONTOLOGY GO 0005739
type: UnificationXref
id: GO:0005739
db: GENE ONTOLOGY

Farnesol
type: SmallMolecule
entity reference: Farnesol

Phytyl pyrophosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 7791
xref: Reference/ChEBI CHEBI 75837
xref: Reference/KEGG Compound C05427
chemical formula: C20H42O7P2
molecular weight: 456.24057
structure: ChemicalStructure/PW C104757

Dehydrodolichol pyrophosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C05859
xref: Reference/PubChem-compound 8152
chemical formula: C25H44O7P2
molecular weight: 518.2562
structure: ChemicalStructure/PW C104758

Solanesyl pyrophosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 6830
xref: Reference/KEGG Compound C04145
xref: Reference/ChEBI CHEBI 18144
chemical formula: C45H76O7P2
molecular weight: 790.50665
structure: ChemicalStructure/PW C104756

Compound/PW C000170 Chloroplast/Stoichiometry/5.0
type: Stoichiometry
physical entity: Pyrophosphate
stoichiometric coefficient: 5.0

Compound/PW C000721/Stoichiometry/1.0
type: Stoichiometry
physical entity: NAD
stoichiometric coefficient: 1.0

Reference/KEGG Compound C19691
type: UnificationXref
id: C19691
db: KEGG Compound

Endoplasmic Reticulum Membrane
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005789

ChemicalStructure/PW C000721
type: ChemicalStructure
structure format: SMILES

Reference/UniProt Q9LX33
type: UnificationXref
id: Q9LX33
db: UniProt

Reference/ChemSpider 5682
type: UnificationXref
id: 5682
db: ChemSpider

Reference/CAS 14000-31-8
type: UnificationXref
id: 14000-31-8
db: CAS

Reference/ChemSpider 5675
type: UnificationXref
id: 5675
db: ChemSpider

Reference/HMDB HMDB0000939
type: UnificationXref
id: HMDB0000939
db: HMDB

Geranyl-PP
type: SmallMolecule
cellular location: Mitochondrion
entity reference: Geranyl-PP

Peptide
type: Protein
cellular location: Endoplasmic Reticulum Membrane
entity reference: Peptide

Reference/UniProt Q09152
type: UnificationXref
id: Q09152
db: UniProt

Arabidopsis thaliana
type: BioSource
xref: Reference/TAXONOMY 3702

Reference/ChemSpider 388299
type: UnificationXref
id: 388299
db: ChemSpider

Oxygen
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001377
xref: Reference/ChemSpider 952
xref: Reference/KEGG Compound C00007
xref: Reference/ChEBI CHEBI 15379
xref: Reference/PubChem-compound 977
xref: Reference/BioCyc CPD-6641
xref: Reference/CAS 7782-44-7
chemical formula: O2
molecular weight: 31.98983
structure: ChemicalStructure/PW C001065

CDP
type: SmallMoleculeReference
xref: Reference/ChemSpider 5902
xref: Reference/PubChem-compound 6132
xref: Reference/HMDB HMDB0001546
xref: Reference/ChEBI CHEBI 17239
xref: Reference/BioCyc CDP
xref: Reference/CAS 63-38-7
xref: Reference/KEGG Compound C00112
chemical formula: C9H15N3O11P2
molecular weight: 403.0182
structure: ChemicalStructure/PW C001189

Reference/GENE ONTOLOGY GO 0005789
type: UnificationXref
id: GO:0005789
db: GENE ONTOLOGY

Farnesyl phosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Farnesyl phosphate

Water
type: SmallMolecule
cellular location: Lysosome
entity reference: Water

Compound/PW C001144/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADH
stoichiometric coefficient: 1.0

Reference/CAS 7782-44-7
type: UnificationXref
id: 7782-44-7
db: CAS

Reference/HMDB HMDB0000961
type: UnificationXref
id: HMDB0000961
db: HMDB

Dimethylallylpyrophosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Dimethylallylpyrophosphate

Compound/PW C001189 Chloroplast/Stoichiometry/1.0
type: Stoichiometry
physical entity: CDP
stoichiometric coefficient: 1.0

Reference/KEGG Compound C20121
type: UnificationXref
id: C20121
db: KEGG Compound

Reference/CAS 358-71-4
type: UnificationXref
id: 358-71-4
db: CAS

Reference/KEGG Compound C20120
type: UnificationXref
id: C20120
db: KEGG Compound

Compound/PW C000143 Chloroplast/Stoichiometry/3.0
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 3.0

Compound/PW C000921 Endoplasmic Reticulum Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: S-Adenosylmethionine
stoichiometric coefficient: 1.0

Reference/PubChem-compound 5893
type: UnificationXref
id: 5893
db: PubChem-compound

ChemicalStructure/PW C000768
type: ChemicalStructure
structure format: SMILES
structure data: [H]OP(=O)(O[H])OP(=O)(O[H])OC\C=C(/C)CC\C=C(/C)CCC=C(C)C

Protein farnesyltransferase
type: Complex
component stoichiometry: Protein/22849/Stoichiometry/1.0
component stoichiometry: Protein/22850/Stoichiometry/1.0
component: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
component: Protein farnesyltransferase subunit beta

Phytyl pyrophosphate
type: SmallMolecule
cellular location: Chloroplast
entity reference: Phytyl pyrophosphate

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 17677
type: UnificationXref
id: CHEBI:17677
db: ChEBI

Pyrophosphate
type: SmallMolecule
cellular location: Mitochondrion
entity reference: Pyrophosphate

Reference/ChEBI CHEBI 15379
type: UnificationXref
id: CHEBI:15379
db: ChEBI

Chloroplast
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0009507

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Reference/UniProt Q8RX88
type: UnificationXref
id: Q8RX88
db: UniProt

Reference/ChEBI CHEBI 17790
type: UnificationXref
id: CHEBI:17790
db: ChEBI

Reference/PubChem-compound 5886
type: UnificationXref
id: 5886
db: PubChem-compound

Reference/KEGG Compound C20119
type: UnificationXref
id: C20119
db: KEGG Compound

Reference/ChEBI CHEBI 16584
type: UnificationXref
id: CHEBI:16584
db: ChEBI

Geranylgeranyl pyrophosphate synthase 6, mitochondrial
type: Protein
cellular location: Mitochondrion
entity reference: Geranylgeranyl pyrophosphate synthase 6, mitochondrial

Compound/Generic560/Stoichiometry/1.0
type: Stoichiometry
physical entity: Protein C-terminal S-farnesyl-L-cysteine methyl ester
stoichiometric coefficient: 1.0

Methanol
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: Methanol

Reference/HMDB HMDB0011627
type: UnificationXref
id: HMDB0011627
db: HMDB

ChemicalStructure/PW C104757
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C104756
type: ChemicalStructure
structure format: SMILES

Geranylgeranyl-PP
type: SmallMolecule
cellular location: Chloroplast
entity reference: Geranylgeranyl-PP

ChemicalStructure/PW C104758
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC\C(C)=C/COP(O)(=O)OP(O)(O)=O

Protein/22849/Stoichiometry/1.0
type: Stoichiometry
physical entity: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
stoichiometric coefficient: 1.0

Reference/PubChem-compound 1195
type: UnificationXref
id: 1195
db: PubChem-compound

Reference/ChEBI CHEBI 17407
type: UnificationXref
id: CHEBI:17407
db: ChEBI

Farnesol
type: SmallMolecule
cellular location: Chloroplast
entity reference: Farnesol

ChemicalStructure/PW C000749
type: ChemicalStructure
structure format: SMILES

Reference/ChEBI CHEBI 16670
type: UnificationXref
id: CHEBI:16670
db: ChEBI

5.3.3.2
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000874 Chloroplast/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001039 Chloroplast/Stoichiometry/1.0
right: Dimethylallylpyrophosphate
spontaneous: false
EC number: 5.3.3.2
left: Isopentenyl pyrophosphate
name: Isopentenyl pyrophosphate ↔ Dimethylallylpyrophosphate
conversion direction: REVERSIBLE

2.5.1.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000170 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001039 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000993 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000874 Mitochondrion/Stoichiometry/1.0
right: Pyrophosphate
right: Geranyl-PP
spontaneous: false
EC number: 2.5.1.1
left: Dimethylallylpyrophosphate
left: Isopentenyl pyrophosphate
name: Dimethylallylpyrophosphate + Isopentenyl pyrophosphate ↔ Geranyl-PP + Pyrophosphate
conversion direction: REVERSIBLE

2.5.1.10
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000170 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001039 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000768 Mitochondrion/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000993 Mitochondrion/Stoichiometry/1.0
right: Pyrophosphate
right: Farnesyl pyrophosphate
spontaneous: false
EC number: 2.5.1.10
left: Geranyl-PP
left: Isopentenyl pyrophosphate
name: Geranyl-PP + Isopentenyl pyrophosphate → Farnesyl pyrophosphate + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

ChemicalStructure/PW C000993
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C104768
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)=CCC\C(C)=C\CC\C(C)=C\COP(O)(O)=O

S-Adenosylhomocysteine
type: SmallMolecule
cellular location: Endoplasmic Reticulum Membrane
entity reference: S-Adenosylhomocysteine

Reference/ChEBI CHEBI 75837
type: UnificationXref
id: CHEBI:75837
db: ChEBI

Reference/ChEBI CHEBI 16680
type: UnificationXref
id: CHEBI:16680
db: ChEBI

ChemicalStructure/PW C000874
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)=CCO[P@](O)(=O)OP(O)(O)=O

Reference/UniProt Q5HZ00
type: UnificationXref
id: Q5HZ00
db: UniProt

Reference/PubChem-compound 24762165
type: UnificationXref
id: 24762165
db: PubChem-compound