Reference/ChEBI CHEBI 16015
type: UnificationXref
id: CHEBI:16015
db: ChEBI

Phenylalanine--tRNA ligase alpha subunit
type: Protein
entity reference: Phenylalanine--tRNA ligase alpha subunit

ReactionCoupledTransport7088
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000095 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: L-Glutamic acid
right: Adenosine diphosphate
right: Hydrogen Ion
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Glutamic acid
name: Adenosine triphosphate + L-Glutamic acid + Water → Adenosine diphosphate + Hydrogen Ion + L-Glutamic acid + Phosphate
conversion direction: LEFT_TO_RIGHT

Aspartate--tRNA(Asp/Asn) ligase
type: Protein
entity reference: Aspartate--tRNA(Asp/Asn) ligase

MerR, DNA binding protein
type: Protein
entity reference: MerR, DNA binding protein

Reference/PubChem-compound 6140
type: UnificationXref
id: 6140
db: PubChem-compound

RNA/3/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Asn)
stoichiometric coefficient: 1.0

L-Serine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Serine

Reference/CAS 63-91-2
type: UnificationXref
id: 63-91-2
db: CAS

Proline-specific permease ProY
type: Protein
entity reference: Proline-specific permease ProY

Isoleucine--tRNA ligase
type: Protein
entity reference: Isoleucine--tRNA ligase

Tryptophan--tRNA ligase
type: Protein
entity reference: Tryptophan--tRNA ligase

Tyrosine--tRNA ligase
type: Protein
entity reference: Tyrosine--tRNA ligase

Reference/CAS 73-32-5
type: UnificationXref
id: 73-32-5
db: CAS

Reference/ChEBI CHEBI 16027
type: UnificationXref
id: CHEBI:16027
db: ChEBI

Reference/ChEBI CHEBI 17115
type: UnificationXref
id: CHEBI:17115
db: ChEBI

Compound/PW C000500 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamine
stoichiometric coefficient: 1.0

Reference/PubChem-compound 6137
type: UnificationXref
id: 6137
db: PubChem-compound

Reference/ChemSpider 559142
type: UnificationXref
id: 559142
db: ChemSpider

Protein/46291/Stoichiometry/2.0
type: Stoichiometry
physical entity: MerR, DNA binding protein
stoichiometric coefficient: 2.0

Lysine--tRNA ligase-like protein GenX
type: Protein
entity reference: Lysine--tRNA ligase-like protein GenX

Histidine--tRNA ligase
type: Protein
entity reference: Histidine--tRNA ligase

RNA/5/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Asp)
stoichiometric coefficient: 1.0

Reference/ChemSpider 5747
type: UnificationXref
id: 5747
db: ChemSpider

Reference/ChemSpider 5746
type: UnificationXref
id: 5746
db: ChemSpider

Reference/ChemSpider 5745
type: UnificationXref
id: 5745
db: ChemSpider

Reference/ChemSpider 5742
type: UnificationXref
id: 5742
db: ChemSpider

Reference/BioCyc L-ASPARTATE
type: UnificationXref
id: L-ASPARTATE
db: BioCyc

RNA/43/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Trp)
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 17561
type: UnificationXref
id: CHEBI:17561
db: ChEBI

RNA/41/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Gln)
stoichiometric coefficient: 1.0

Reference/ChemSpider 5736
type: UnificationXref
id: 5736
db: ChemSpider

Reference/UniProt D0SML3
type: UnificationXref
id: D0SML3
db: UniProt

Reference/UniProt D0SML2
type: UnificationXref
id: D0SML2
db: UniProt

Reference/ChemSpider 5735
type: UnificationXref
id: 5735
db: ChemSpider

RNA/7/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamyl-tRNA(Glu)
stoichiometric coefficient: 1.0

Urea ABC transporter, permease protein UrtC
type: Protein
cellular location: Inner Membrane
entity reference: Urea ABC transporter, permease protein UrtC

Transport50541
type: Transport
participant stoichiometry: Compound/PW C000109 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000109 Cytosol/Stoichiometry/1.0
right: L-Threonine
right: Hydrogen Ion
spontaneous: false
left: Hydrogen Ion
left: L-Threonine
name: L-Threonine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Compound/PW C000032/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine monophosphate
stoichiometric coefficient: 1.0

Transport50542
type: Transport
participant stoichiometry: Compound/PW C000103 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000103 Periplasmic Space/Stoichiometry/1.0
right: Hydrogen Ion
right: L-Tyrosine
spontaneous: false
left: L-Tyrosine
left: Hydrogen Ion
name: L-Tyrosine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Transport50543
type: Transport
participant stoichiometry: Compound/PW C000741 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000741 Periplasmic Space/Stoichiometry/1.0
right: L-Tryptophan
right: Hydrogen Ion
spontaneous: false
left: Hydrogen Ion
left: L-Tryptophan
name: L-Tryptophan (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Reference/UniProt D0SQU9
type: UnificationXref
id: D0SQU9
db: UniProt

Transport50544
type: Transport
participant stoichiometry: Compound/PW C000104 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000104 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
right: L-Phenylalanine
right: Hydrogen Ion
spontaneous: false
left: Hydrogen Ion
left: L-Phenylalanine
name: L-Phenylalanine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Hydrogen Ion
type: SmallMolecule
entity reference: Hydrogen Ion

Compound/PW C000741/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tryptophan
stoichiometric coefficient: 1.0

Transport50540
type: Transport
participant stoichiometry: Compound/PW C000120 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000120 Periplasmic Space/Stoichiometry/1.0
right: Hydrogen Ion
right: L-Serine
spontaneous: false
left: Hydrogen Ion
left: L-Serine
name: L-Serine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Reference/PubChem-compound 6106
type: UnificationXref
id: 6106
db: PubChem-compound

Transport50545
type: Transport
participant stoichiometry: Compound/PW C000110 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000110 Periplasmic Space/Stoichiometry/1.0
right: L-Asparagine
right: Hydrogen Ion
spontaneous: false
left: L-Asparagine
left: Hydrogen Ion
name: L-Asparagine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Adenosine triphosphate
type: SmallMolecule
entity reference: Adenosine triphosphate

RNA/9/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Met)
stoichiometric coefficient: 1.0

Reference/CAS 56-87-1
type: UnificationXref
id: 56-87-1
db: CAS

Reference/KEGG Compound C00009
type: UnificationXref
id: C00009
db: KEGG Compound

Reference/KEGG Compound C00008
type: UnificationXref
id: C00008
db: KEGG Compound

Compound/PW C000500/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamine
stoichiometric coefficient: 1.0

Reference/UniProt D0SQV8
type: UnificationXref
id: D0SQV8
db: UniProt

Reference/UniProt D0SQV7
type: UnificationXref
id: D0SQV7
db: UniProt

Hydrogen Ion
type: SmallMolecule
cellular location: Cytosol
entity reference: Hydrogen Ion

Reference/BioCyc L-ALPHA-ALANINE
type: UnificationXref
id: L-ALPHA-ALANINE
db: BioCyc

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Transport50538
type: Transport
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000105 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000105 Cytosol/Stoichiometry/1.0
right: Hydrogen Ion
right: L-Alanine
spontaneous: false
left: L-Alanine
left: Hydrogen Ion
name: L-Alanine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Transport50539
type: Transport
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078 Cytosol/Stoichiometry/1.0
right: Glycine
right: Hydrogen Ion
spontaneous: false
left: Hydrogen Ion
left: Glycine
name: Glycine (→), Hydrogen Ion (→) Transport: Acinetobacter junii SH205, Periplasmic Space to Acinetobacter junii SH205, Cytosol
conversion direction: LEFT_TO_RIGHT

Reference/CAS 56-41-7
type: UnificationXref
id: 56-41-7
db: CAS

Reference/KEGG Compound C00002
type: UnificationXref
id: C00002
db: KEGG Compound

L-Aspartic acid
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Aspartic acid

Reference/INSDC 945257
type: UnificationXref
id: 945257
db: INSDC

Reference/SMPDB SMP0390121
type: UnificationXref
id: SMP0390121
db: SMPDB

Reference/INSDC 945264
type: UnificationXref
id: 945264
db: INSDC

Reference/KEGG Compound C00013
type: UnificationXref
id: C00013
db: KEGG Compound

RNA/14/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Arg)
stoichiometric coefficient: 1.0

Reference/INSDC 947202
type: UnificationXref
id: 947202
db: INSDC

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Reference/ChEBI CHEBI 16047
type: UnificationXref
id: CHEBI:16047
db: ChEBI

L-Asparagine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Asparagine

Reference/CAS 56-65-5
type: UnificationXref
id: 56-65-5
db: CAS

Reference/BioCyc MET
type: UnificationXref
id: MET
db: BioCyc

Reference/KEGG Compound C00020
type: UnificationXref
id: C00020
db: KEGG Compound

Reference/KEGG Compound C00025
type: UnificationXref
id: C00025
db: KEGG Compound

Compound/PW C000103/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tyrosine
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 29170
type: UnificationXref
id: CHEBI:29170
db: ChEBI

Reference/ChEBI CHEBI 29172
type: UnificationXref
id: CHEBI:29172
db: ChEBI

Reference/ChEBI CHEBI 29171
type: UnificationXref
id: CHEBI:29171
db: ChEBI

L-Histidine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Histidine

Reference/CAS 52-90-4
type: UnificationXref
id: 52-90-4
db: CAS

Reference/KEGG Compound C00037
type: UnificationXref
id: C00037
db: KEGG Compound

Reference/UniProt D0SHW6
type: UnificationXref
id: D0SHW6
db: UniProt

L-Alanine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Alanine

Reference/UniProt D0SHW7
type: UnificationXref
id: D0SHW7
db: UniProt

Reference/UniProt D0SHW5
type: UnificationXref
id: D0SHW5
db: UniProt

Reference/KEGG Compound C00041
type: UnificationXref
id: C00041
db: KEGG Compound

L-Prolyl-tRNA(Pro)
type: RnaReference
xref: Reference/ChEBI CHEBI 29154

L-Arginyl-tRNA(Arg)
type: RnaReference
xref: Reference/ChEBI CHEBI 18366

Reference/ChEBI CHEBI 29173
type: UnificationXref
id: CHEBI:29173
db: ChEBI

tRNA(Pro)
type: RnaReference
xref: Reference/ChEBI CHEBI 29177

tRNA(Cys)
type: RnaReference
xref: Reference/ChEBI CHEBI 29167

tRNA(Arg)
type: RnaReference
xref: Reference/ChEBI CHEBI 29171

Reference/ChEBI CHEBI 29175
type: UnificationXref
id: CHEBI:29175
db: ChEBI

Reference/ChEBI CHEBI 29178
type: UnificationXref
id: CHEBI:29178
db: ChEBI

L-Methionyl-tRNA(Met)
type: RnaReference
xref: Reference/ChEBI CHEBI 16635

L-Cysteinyl-tRNA(Cys)
type: RnaReference
xref: Reference/ChEBI CHEBI 29152

Reference/ChEBI CHEBI 29177
type: UnificationXref
id: CHEBI:29177
db: ChEBI

ChemicalStructure/PW C000170
type: ChemicalStructure
structure format: SMILES
structure data: OP(O)(=O)OP(O)(O)=O

tRNA(Phe)
type: RnaReference
xref: Reference/ChEBI CHEBI 29184

Reference/ChEBI CHEBI 29161
type: UnificationXref
id: CHEBI:29161
db: ChEBI

Reference/ChEBI CHEBI 29160
type: UnificationXref
id: CHEBI:29160
db: ChEBI

Reference/ChEBI CHEBI 17196
type: UnificationXref
id: CHEBI:17196
db: ChEBI

Reference/ChemSpider 128566
type: UnificationXref
id: 128566
db: ChemSpider

Reference/KEGG Compound C00049
type: UnificationXref
id: C00049
db: KEGG Compound

L-Cysteine
type: SmallMolecule
entity reference: L-Cysteine

Reference/KEGG Compound C00047
type: UnificationXref
id: C00047
db: KEGG Compound

Reference/CAS 56-85-9
type: UnificationXref
id: 56-85-9
db: CAS

ChemicalStructure/PW C001034
type: ChemicalStructure
structure format: SMILES

L-Phenylalanyl-tRNA(Phe)
type: RnaReference
xref: Reference/ChEBI CHEBI 29153

Reference/HMDB HMDB0000148
type: UnificationXref
id: HMDB0000148
db: HMDB

Inner membrane protein
type: Protein
cellular location: Inner Membrane
entity reference: Inner membrane protein

L-Tyrosyl-tRNA(Tyr)
type: RnaReference
xref: Reference/ChEBI CHEBI 29161

Reference/ChEBI CHEBI 17191
type: UnificationXref
id: CHEBI:17191
db: ChEBI

tRNA(Tyr)
type: RnaReference
xref: Reference/ChEBI CHEBI 29182

Reference/ChEBI CHEBI 29163
type: UnificationXref
id: CHEBI:29163
db: ChEBI

L-Histidyl-tRNA(His)
type: RnaReference
xref: Reference/ChEBI CHEBI 29155

Reference/ChEBI CHEBI 29162
type: UnificationXref
id: CHEBI:29162
db: ChEBI

tRNA(His)
type: RnaReference
xref: Reference/ChEBI CHEBI 29178

L-Seryl-tRNA(Ser)
type: RnaReference
xref: Reference/ChEBI CHEBI 29162

Reference/ChEBI CHEBI 29164
type: UnificationXref
id: CHEBI:29164
db: ChEBI

L-Tryptophyl-tRNA(Trp)
type: RnaReference
xref: Reference/ChEBI CHEBI 29159

Reference/ChEBI CHEBI 29167
type: UnificationXref
id: CHEBI:29167
db: ChEBI

Glycyl-tRNA(Gly)
type: RnaReference
xref: Reference/ChEBI CHEBI 29156

Reference/ChEBI CHEBI 18019
type: UnificationXref
id: CHEBI:18019
db: ChEBI

L-Phenylalanine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Phenylalanine

L-Asparagine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Asparagine

ChemicalStructure/PW C000396
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CCCNC(N)=N)C(O)=O

Reference/CAS 72-18-4
type: UnificationXref
id: 72-18-4
db: CAS

Reference/ChEBI CHEBI 29159
type: UnificationXref
id: CHEBI:29159
db: ChEBI

Reference/HMDB HMDB0000158
type: UnificationXref
id: HMDB0000158
db: HMDB

Reference/KEGG Compound C00062
type: UnificationXref
id: C00062
db: KEGG Compound

Reference/HMDB HMDB0000159
type: UnificationXref
id: HMDB0000159
db: HMDB

Reference/ChEBI CHEBI 29152
type: UnificationXref
id: CHEBI:29152
db: ChEBI

Reference/ChEBI CHEBI 29154
type: UnificationXref
id: CHEBI:29154
db: ChEBI

Reference/ChEBI CHEBI 29153
type: UnificationXref
id: CHEBI:29153
db: ChEBI

Reference/ChEBI CHEBI 29156
type: UnificationXref
id: CHEBI:29156
db: ChEBI

Reference/ChEBI CHEBI 29155
type: UnificationXref
id: CHEBI:29155
db: ChEBI

Reference/ChEBI CHEBI 29158
type: UnificationXref
id: CHEBI:29158
db: ChEBI

Reference/ChEBI CHEBI 29157
type: UnificationXref
id: CHEBI:29157
db: ChEBI

Reference/ChemSpider 5907
type: UnificationXref
id: 5907
db: ChemSpider

Adenosine triphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15422
xref: Reference/PubChem-compound 5957
xref: Reference/HMDB HMDB0000538
xref: Reference/CAS 56-65-5
xref: Reference/ChemSpider 5742
xref: Reference/BioCyc ATP
xref: Reference/KEGG Compound C00002
chemical formula: C10H16N5O13P3
molecular weight: 506.99576
structure: ChemicalStructure/PW C000414

Reference/KEGG Compound C00065
type: UnificationXref
id: C00065
db: KEGG Compound

Reference/KEGG Compound C00064
type: UnificationXref
id: C00064
db: KEGG Compound

Reference/HMDB HMDB0000167
type: UnificationXref
id: HMDB0000167
db: HMDB

Reference/HMDB HMDB0000168
type: UnificationXref
id: HMDB0000168
db: HMDB

Reference/KEGG Compound C00073
type: UnificationXref
id: C00073
db: KEGG Compound

Reference/HMDB HMDB0000161
type: UnificationXref
id: HMDB0000161
db: HMDB

Reference/TAXONOMY 575587
type: UnificationXref
id: 575587
db: TAXONOMY

Reference/HMDB HMDB0000162
type: UnificationXref
id: HMDB0000162
db: HMDB

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

TransportCatalysis31899
type: Catalysis
controller: Unknown
controlled: Transport50538
control type: ACTIVATION

L-Alanine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Alanine

Reference/KEGG Compound C00078
type: UnificationXref
id: C00078
db: KEGG Compound

Compound/PW C000118 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Lysine
stoichiometric coefficient: 1.0

Reference/PubChem-compound 145742
type: UnificationXref
id: 145742
db: PubChem-compound

Reference/KEGG Compound C00079
type: UnificationXref
id: C00079
db: KEGG Compound

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Reference/HMDB HMDB0000177
type: UnificationXref
id: HMDB0000177
db: HMDB

Periplasmic Space
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005620

Compound/PW C000105/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Alanine
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00082
type: UnificationXref
id: C00082
db: KEGG Compound

Reference/HMDB HMDB0000172
type: UnificationXref
id: HMDB0000172
db: HMDB

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

Reference/CAS 14265-44-2
type: UnificationXref
id: 14265-44-2
db: CAS

Reference/ChemSpider 5910
type: UnificationXref
id: 5910
db: ChemSpider

RNA/16/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Cysteinyl-tRNA(Cys)
stoichiometric coefficient: 1.0

Protein/46297/Stoichiometry/2.0
type: Stoichiometry
physical entity: Histidine--tRNA ligase
stoichiometric coefficient: 2.0

Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

L-Lysine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Lysine

Reference/HMDB HMDB0000182
type: UnificationXref
id: HMDB0000182
db: HMDB

Reference/HMDB HMDB0000187
type: UnificationXref
id: HMDB0000187
db: HMDB

Reference/PubChem-compound 644102
type: UnificationXref
id: 644102
db: PubChem-compound

L-Cysteine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000574
xref: Reference/CAS 52-90-4
xref: Reference/KEGG Compound C00097
xref: Reference/BioCyc CYS
xref: Reference/ChemSpider 5653
xref: Reference/PubChem-compound 5862
xref: Reference/ChEBI CHEBI 17561
chemical formula: C3H7NO2S
molecular weight: 121.01975
structure: ChemicalStructure/PW C000448

Protein/33759 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: ABC transporter, ATP-binding protein
stoichiometric coefficient: 2.0

Reference/KEGG Compound C00097
type: UnificationXref
id: C00097
db: KEGG Compound

Reference/ChEBI CHEBI 18050
type: UnificationXref
id: CHEBI:18050
db: ChEBI

Reference/HMDB HMDB0000191
type: UnificationXref
id: HMDB0000191
db: HMDB

Reference/UniProt D0SKB2
type: UnificationXref
id: D0SKB2
db: UniProt

Glycine--tRNA ligase alpha subunit
type: Protein
entity reference: Glycine--tRNA ligase alpha subunit

Threonine--tRNA ligase
type: Protein
entity reference: Threonine--tRNA ligase

Valine--tRNA ligase
type: Protein
entity reference: Valine--tRNA ligase

Reference/ChEBI CHEBI 29182
type: UnificationXref
id: CHEBI:29182
db: ChEBI

ABC transporter, permease protein
type: Protein
cellular location: Inner Membrane
entity reference: ABC transporter, permease protein

L-Glutamic acid
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Glutamic acid

NLPA lipoprotein
type: Protein
cellular location: Inner Membrane
entity reference: NLPA lipoprotein

Cysteine--tRNA ligase
type: Protein
entity reference: Cysteine--tRNA ligase

Arginine--tRNA ligase
type: Protein
entity reference: Arginine--tRNA ligase

Reference/ChEBI CHEBI 29184
type: UnificationXref
id: CHEBI:29184
db: ChEBI

Adenosine diphosphate
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Adenosine diphosphate

Glutamate--tRNA ligase
type: Protein
entity reference: Glutamate--tRNA ligase

Reference/ChEBI CHEBI 29186
type: UnificationXref
id: CHEBI:29186
db: ChEBI

RNA/22/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tyrosyl-tRNA(Tyr)
stoichiometric coefficient: 1.0

DUF4349 domain-containing protein
type: Protein
entity reference: DUF4349 domain-containing protein

RNA/38/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Valyl-tRNA(Val)
stoichiometric coefficient: 1.0

Reference/ChemSpider 30572
type: UnificationXref
id: 30572
db: ChemSpider

ChemicalStructure/PW C000448
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CS)C(O)=O

L-Valyl-tRNA(Val)
type: Rna
entity reference: L-Valyl-tRNA(Val)

tRNA(Val)
type: Rna
entity reference: tRNA(Val)

tRNA(Ile)
type: Rna
entity reference: tRNA(Ile)

Compound/PW C000170 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Pyrophosphate
stoichiometric coefficient: 1.0

tRNA(Ser)
type: Rna
entity reference: tRNA(Ser)

tRNA(gly)
type: Rna
entity reference: tRNA(gly)

L-Threonyl-tRNA(Thr)
type: Rna
entity reference: L-Threonyl-tRNA(Thr)

Acinetobacter junii SH205
type: BioSource
xref: Reference/TAXONOMY 575587

tRNA(Thr)
type: Rna
entity reference: tRNA(Thr)

L-Leucyl-tRNA(Leu)
type: Rna
entity reference: L-Leucyl-tRNA(Leu)

tRNA(Leu)
type: Rna
entity reference: tRNA(Leu)

RNA/37/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Val)
stoichiometric coefficient: 1.0

Adenosine monophosphate
type: SmallMoleculeReference
xref: Reference/CAS 61-19-8
xref: Reference/ChemSpider 5858
xref: Reference/HMDB HMDB0000045
xref: Reference/BioCyc AMP
xref: Reference/ChEBI CHEBI 16027
xref: Reference/PubChem-compound 6083
xref: Reference/KEGG Compound C00020
chemical formula: C10H14N5O7P
molecular weight: 347.06308
structure: ChemicalStructure/PW C000032

Reference/ChEBI CHEBI 15971
type: UnificationXref
id: CHEBI:15971
db: ChEBI

Unknown
type: Protein
entity reference: Unknown

Reference/HMDB HMDB0000538
type: UnificationXref
id: HMDB0000538
db: HMDB

L-Seryl-tRNA(Ser)
type: Rna
entity reference: L-Seryl-tRNA(Ser)

Glycyl-tRNA(Gly)
type: Rna
entity reference: Glycyl-tRNA(Gly)

Reference/UniProt D0SL79
type: UnificationXref
id: D0SL79
db: UniProt

Reference/PubChem-compound 5961
type: UnificationXref
id: 5961
db: PubChem-compound

Reference/PubChem-compound 5962
type: UnificationXref
id: 5962
db: PubChem-compound

histidine ABC transporter
type: Complex
component stoichiometry: Protein/31750 Inner Membrane/Stoichiometry/2.0
cellular location: Inner Membrane
component: D-methionine transport system permease protein MetI
component: ABC transporter, ATP-binding protein
component: ABC transporter, substrate-binding protein, aliphatic sulfonates family

Reference/UniProt D0SKV5
type: UnificationXref
id: D0SKV5
db: UniProt

RNA/36/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Leucyl-tRNA(Leu)
stoichiometric coefficient: 1.0

D-methionine transport system permease protein MetI
type: Protein
cellular location: Inner Membrane
entity reference: D-methionine transport system permease protein MetI

tRNA(Tyr)
type: Rna
entity reference: tRNA(Tyr)

L-Phenylalanyl-tRNA(Phe)
type: Rna
entity reference: L-Phenylalanyl-tRNA(Phe)

tRNA(His)
type: Rna
entity reference: tRNA(His)

L-Tyrosyl-tRNA(Tyr)
type: Rna
entity reference: L-Tyrosyl-tRNA(Tyr)

tRNA(Ala)
type: Dna
entity reference: tRNA(Ala)

L-Tryptophyl-tRNA(Trp)
type: Rna
entity reference: L-Tryptophyl-tRNA(Trp)

L-Histidyl-tRNA(His)
type: Rna
entity reference: L-Histidyl-tRNA(His)

lysine / arginine / ornithine ABC transporter
type: Complex
component stoichiometry: Protein/31750 Inner Membrane/Stoichiometry/2.0
cellular location: Inner Membrane
component: D-methionine transport system permease protein MetI
component: DUF490 domain-containing protein
component: ABC transporter, ATP-binding protein

Compound/PW C000110 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Asparagine
stoichiometric coefficient: 1.0

tRNA(Asn)
type: Rna
entity reference: tRNA(Asn)

L-Alanyl-tRNA(Ala)
type: Rna
entity reference: L-Alanyl-tRNA(Ala)

tRNA(Met)
type: Rna
entity reference: tRNA(Met)

tRNA(Glu)
type: Rna
entity reference: tRNA(Glu)

L-Glutamyl-tRNA(Glu)
type: Rna
entity reference: L-Glutamyl-tRNA(Glu)

L-Aspartyl-tRNA(Asp)
type: Rna
entity reference: L-Aspartyl-tRNA(Asp)

tRNA(Asp)
type: Rna
entity reference: tRNA(Asp)

L-Asparaginyl-tRNA(Asn)
type: Rna
entity reference: L-Asparaginyl-tRNA(Asn)

Reference/BioCyc LYS
type: UnificationXref
id: LYS
db: BioCyc

Adenosine monophosphate
type: SmallMolecule
entity reference: Adenosine monophosphate

Protein/46286/Stoichiometry/2.0
type: Stoichiometry
physical entity: Isoleucine--tRNA ligase
stoichiometric coefficient: 2.0

Phosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00009
xref: Reference/PubChem-compound 1061
xref: Reference/CAS 14265-44-2
xref: Reference/HMDB HMDB0001429
xref: Reference/BioCyc CPD-8587
xref: Reference/ChEBI CHEBI 18367
xref: Reference/ChemSpider 1032
chemical formula: H3O4P
molecular weight: 97.9769
structure: ChemicalStructure/PW C001104

Reference/BioCyc SER
type: UnificationXref
id: SER
db: BioCyc

tRNA(Gln)
type: Rna
entity reference: tRNA(Gln)

Protein/31750 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: ABC transporter, ATP-binding protein
stoichiometric coefficient: 2.0

L-Isoleucyl-tRNA(Ile)
type: Rna
entity reference: L-Isoleucyl-tRNA(Ile)

tRNA(Trp)
type: Rna
entity reference: tRNA(Trp)

L-Glutaminyl-tRNA(Gln)
type: Rna
entity reference: L-Glutaminyl-tRNA(Gln)

L-Lysyl-tRNA(Lys)
type: Rna
entity reference: L-Lysyl-tRNA(Lys)

tRNA(Lys)
type: Rna
entity reference: tRNA(Lys)

Transcriptional regulator, AraC family
type: Protein
cellular location: Inner Membrane
entity reference: Transcriptional regulator, AraC family

L-Methionine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Methionine

Reference/ChEBI CHEBI 16857
type: UnificationXref
id: CHEBI:16857
db: ChEBI

L-methionine / D-methionine ABC transporter
type: Complex
component stoichiometry: Protein/33759 Inner Membrane/Stoichiometry/2.0
cellular location: Inner Membrane
component: D-methionine transport system permease protein MetI
component: NLPA lipoprotein
component: ABC transporter, ATP-binding protein

Reference/CAS 71-00-1
type: UnificationXref
id: 71-00-1
db: CAS

Compound/PW C000120 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Serine
stoichiometric coefficient: 1.0

Cysteine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SJX8

Reference/HMDB HMDB0000574
type: UnificationXref
id: HMDB0000574
db: HMDB

Glutamate--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SNH6

RNA/20/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanyl-tRNA(Phe)
stoichiometric coefficient: 1.0

L-Glutamic acid
type: SmallMolecule
entity reference: L-Glutamic acid

Reference/CAS 72-19-5
type: UnificationXref
id: 72-19-5
db: CAS

Inner membrane protein
type: ProteinReference
xref: Reference/UniProt D0SLI2
organism: Acinetobacter junii SH205

Arginine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SRA5

ChemicalStructure/PW C001104
type: ChemicalStructure
structure format: SMILES
structure data: OP(O)(O)=O

DUF4349 domain-containing protein
type: ProteinReference
xref: Reference/UniProt D0SNA7

Glycine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000123
xref: Reference/BioCyc GLY
xref: Reference/ChemSpider 730
xref: Reference/PubChem-compound 5257127
xref: Reference/CAS 56-40-6
xref: Reference/ChEBI CHEBI 15428
xref: Reference/KEGG Compound C00037
chemical formula: C2H5NO2
molecular weight: 75.03203
structure: ChemicalStructure/PW C000078

ABC transporter, substrate-binding protein, aliphatic sulfonates family
type: ProteinReference
xref: Reference/UniProt D0SQV7
organism: Acinetobacter junii SH205

Compound/PW C000106 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Proline
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16624
type: UnificationXref
id: CHEBI:16624
db: ChEBI

Reference/HMDB HMDB0001429
type: UnificationXref
id: HMDB0001429
db: HMDB

Compound/PW C000103 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tyrosine
stoichiometric coefficient: 1.0

Compound/PW C000540/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Leucine
stoichiometric coefficient: 1.0

ReactionCoupledTransportCatalysis7150
type: Catalysis
controller: glutamate / aspartate ABC transporter
controlled: ReactionCoupledTransport7088
control type: ACTIVATION

Reference/PubChem-compound 5950
type: UnificationXref
id: 5950
db: PubChem-compound

Reference/PubChem-compound 5951
type: UnificationXref
id: 5951
db: PubChem-compound

L-arginine ABC transporter
type: Complex
component stoichiometry: Protein/33759 Inner Membrane/Stoichiometry/2.0
cellular location: Inner Membrane
component: Unknown
component: Inner membrane protein
component: ABC transporter, ATP-binding protein
component: ABC transporter, substrate-binding protein, aliphatic sulfonates family

Lysine--tRNA ligase-like protein GenX
type: ProteinReference
xref: Reference/UniProt D0SM58

Transcriptional regulator, AraC family
type: ProteinReference
xref: Reference/UniProt D0SJ84
organism: Acinetobacter junii SH205

Histidine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SL54

Reference/UniProt D0SJ84
type: UnificationXref
id: D0SJ84
db: UniProt

tRNA(gly)
type: RnaReference
xref: Reference/INSDC 946416

Glycine
type: SmallMolecule
entity reference: Glycine

tRNA(Thr)
type: RnaReference
xref: Reference/INSDC 947202

Reference/PubChem-compound 5957
type: UnificationXref
id: 5957
db: PubChem-compound

tRNA(Ser)
type: RnaReference
xref: Reference/INSDC 945501

tRNA(Leu)
type: RnaReference
xref: Reference/INSDC 945264

Phenylalanine--tRNA ligase alpha subunit
type: ProteinReference
xref: Reference/UniProt D0SQE0

L-Threonyl-tRNA(Thr)
type: RnaReference
xref: Reference/ChEBI CHEBI 29163

MerR, DNA binding protein
type: ProteinReference
xref: Reference/UniProt D0SNJ3

tRNA(Val)
type: RnaReference
xref: Reference/INSDC 945331

Reference/ChEBI CHEBI 16828
type: UnificationXref
id: CHEBI:16828
db: ChEBI

L-Leucyl-tRNA(Leu)
type: RnaReference
xref: Reference/ChEBI CHEBI 16624

tRNA(Ile)
type: RnaReference
xref: Reference/INSDC 944884

DUF490 domain-containing protein
type: ProteinReference
xref: Reference/UniProt D0SI34
organism: Acinetobacter junii SH205

L-Valyl-tRNA(Val)
type: RnaReference
xref: Reference/ChEBI CHEBI 29164

Compound/PW C000095 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamic acid
stoichiometric coefficient: 1.0

NLPA lipoprotein
type: ProteinReference
xref: Reference/UniProt D0SHW7
organism: Acinetobacter junii SH205

Aspartate--tRNA(Asp/Asn) ligase
type: ProteinReference
xref: Reference/UniProt D0SL79

ABC transporter, substrate-binding protein, aliphatic sulfonates family
type: ProteinReference
xref: Reference/UniProt D0SQV8
organism: Acinetobacter junii SH205

Compound/PW C000105 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Alanine
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000123
type: UnificationXref
id: HMDB0000123
db: HMDB

Proline-specific permease ProY
type: ProteinReference
xref: Reference/UniProt D0SJC3

Tyrosine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SRK2

Valine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SLU3

L-Isoleucyl-tRNA(Ile)
type: RnaReference
xref: Reference/ChEBI CHEBI 29160

Isoleucine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SQU9

Reference/UniProt D0SNA7
type: UnificationXref
id: D0SNA7
db: UniProt

L-Glutaminyl-tRNA(Gln)
type: RnaReference

tRNA(Gln)
type: RnaReference
xref: Reference/INSDC 945257

Tryptophan--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SLZ8

tRNA(Lys)
type: RnaReference
xref: Reference/INSDC 945336

tRNA(Trp)
type: RnaReference
xref: Reference/INSDC 948275

Glycine--tRNA ligase alpha subunit
type: ProteinReference
xref: Reference/UniProt D0SN88

L-Lysyl-tRNA(Lys)
type: RnaReference
xref: Reference/ChEBI CHEBI 16047

Reference/CAS 147-85-3
type: UnificationXref
id: 147-85-3
db: CAS

Urea ABC transporter, permease protein UrtC
type: ProteinReference
xref: Reference/UniProt D0SNW0
organism: Acinetobacter junii SH205

Urea ABC transporter, urea binding protein
type: ProteinReference
xref: Reference/UniProt D0SNW2
organism: Acinetobacter junii SH205

Threonine--tRNA ligase
type: ProteinReference
xref: Reference/UniProt D0SQC9

Compound/PW C000396/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Arginine
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16414
type: UnificationXref
id: CHEBI:16414
db: ChEBI

Adenosine triphosphate
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Adenosine triphosphate

L-Tryptophan
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Tryptophan

Reference/HMDB HMDB0000929
type: UnificationXref
id: HMDB0000929
db: HMDB

ReactionCatalysis659152
type: Catalysis
controller: Tryptophan--tRNA ligase
controlled: 6.1.1.2
control type: ACTIVATION

ReactionCatalysis659151
type: Catalysis
controller: Tyrosine--tRNA ligase
controlled: 6.1.1.1
control type: ACTIVATION

ReactionCatalysis659154
type: Catalysis
controller: Aspartate--tRNA(Asp/Asn) ligase
controlled: 6.1.1.22
control type: ACTIVATION

ReactionCatalysis659153
type: Catalysis
controller: phenylalanyl-tRNA synthetase
controlled: 6.1.1.20
control type: ACTIVATION

ReactionCatalysis659156
type: Catalysis
controller: lysine tRNA synthetase
controlled: 6.1.1.6
control type: ACTIVATION

L-Tryptophan
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Tryptophan

ReactionCatalysis659155
type: Catalysis
controller: histidyl-tRNA synthetase
controlled: 6.1.1.21
control type: ACTIVATION

ReactionCatalysis659158
type: Catalysis
controller: prolyl-tRNA synthetase
controlled: 6.1.1.15
control type: ACTIVATION

ReactionCatalysis659157
type: Catalysis
controller: methionyl-tRNA synthetase
controlled: 6.1.1.10
control type: ACTIVATION

ReactionCatalysis659150
type: Catalysis
controller: Unknown
controlled: 6.1.1.12
control type: ACTIVATION

Reference/CAS 14000-31-8
type: UnificationXref
id: 14000-31-8
db: CAS

ReactionCatalysis659149
type: Catalysis
controller: Glutamate--tRNA ligase
controlled: 6.1.1.18
control type: ACTIVATION

ReactionCatalysis659148
type: Catalysis
controller: Valine--tRNA ligase
controlled: 6.1.1.5
control type: ACTIVATION

ReactionCatalysis659141
type: Catalysis
controller: Glutamate--tRNA ligase
controlled: 6.1.1.17
control type: ACTIVATION

ReactionCatalysis659140
type: Catalysis
controller: Cysteine--tRNA ligase
controlled: 6.1.1.16
control type: ACTIVATION

ReactionCatalysis659143
type: Catalysis
controller: glycyl-tRNA synthetase
controlled: 6.1.1.14
control type: ACTIVATION

ReactionCatalysis659142
type: Catalysis
controller: alanyl-tRNA synthetase
controlled: 6.1.1.7
control type: ACTIVATION

Unknown
type: Protein
cellular location: Inner Membrane
entity reference: Unknown

ReactionCatalysis659145
type: Catalysis
controller: Unknown
controlled: Reaction663977
control type: ACTIVATION

ReactionCatalysis659144
type: Catalysis
controller: seryl-tRNA synthetase
controlled: 6.1.1.11
control type: ACTIVATION

ReactionCatalysis659147
type: Catalysis
controller: Isoleucine--tRNA ligase
controlled: 6.1.1.9
control type: ACTIVATION

ReactionCatalysis659146
type: Catalysis
controller: Valine--tRNA ligase
controlled: 6.1.1.4
control type: ACTIVATION

Compound/PW C000105 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Alanine
stoichiometric coefficient: 1.0

Water
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Water

Oxidoreductase, short chain dehydrogenase/reductase family protein
type: ProteinReference
xref: Reference/UniProt D0SHR6
organism: Acinetobacter junii SH205

Sulfatase-modifying factor enzyme domain-containing protein
type: ProteinReference
xref: Reference/UniProt D0SI70
organism: Acinetobacter junii SH205

Reference/ChEBI CHEBI 16635
type: UnificationXref
id: CHEBI:16635
db: ChEBI

D-methionine transport system permease protein MetI
type: ProteinReference
xref: Reference/UniProt D0SHW5
organism: Acinetobacter junii SH205

ReactionCatalysis659139
type: Catalysis
controller: Arginine--tRNA ligase
controlled: 6.1.1.19
control type: ACTIVATION

L-Threonine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Threonine

Reference/PubChem-compound 28782
type: UnificationXref
id: 28782
db: PubChem-compound

Reference/BioCyc HIS
type: UnificationXref
id: HIS
db: BioCyc

Protein/46279/Stoichiometry/2.0
type: Stoichiometry
physical entity: DUF4349 domain-containing protein
stoichiometric coefficient: 2.0

L-Glutamic acid
type: SmallMoleculeReference
xref: Reference/PubChem-compound 33032
xref: Reference/ChEBI CHEBI 16015
xref: Reference/ChemSpider 30572
xref: Reference/HMDB HMDB0000148
xref: Reference/CAS 56-86-0
xref: Reference/BioCyc GLT
xref: Reference/KEGG Compound C00025
chemical formula: C5H9NO4
molecular weight: 147.05316
structure: ChemicalStructure/PW C000095

Reference/PubChem-compound 33032
type: UnificationXref
id: 33032
db: PubChem-compound

Reference/ChEBI CHEBI 17732
type: UnificationXref
id: CHEBI:17732
db: ChEBI

Reference/CAS 60-18-4
type: UnificationXref
id: 60-18-4
db: CAS

Reference/ChEBI CHEBI 16643
type: UnificationXref
id: CHEBI:16643
db: ChEBI

Urea ABC transporter, permease protein UrtB
type: ProteinReference
xref: Reference/UniProt D0SNW1
organism: Acinetobacter junii SH205

ReactionCoupledTransportCatalysis6211
type: Catalysis
controller: glutamine ABC transporter
controlled: ReactionCoupledTransport6149
control type: ACTIVATION

Protein/40013 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: ABC transporter, permease protein
stoichiometric coefficient: 2.0

Reference/CAS 61-90-5
type: UnificationXref
id: 61-90-5
db: CAS

ReactionCoupledTransportCatalysis6217
type: Catalysis
controller: glutamate / aspartate ABC transporter
controlled: ReactionCoupledTransport6155
control type: ACTIVATION

Compound/PW C000116 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Histidine
stoichiometric coefficient: 1.0

Glycine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: Glycine

glutamine ABC transporter
type: Complex
component stoichiometry: Protein/35895 Inner Membrane/Stoichiometry/2.0
component stoichiometry: Protein/33760 Inner Membrane/Stoichiometry/2.0
cellular location: Inner Membrane
component: ABC transporter, permease protein
component: Sulfate/thiosulfate import ATP-binding protein CysA
component: Oxidoreductase, short chain dehydrogenase/reductase family protein

branched chain amino acid ABC transporter
type: Complex
cellular location: Inner Membrane
component: Urea ABC transporter, ATP-binding protein UrtE
component: Urea ABC transporter, permease protein UrtB
component: Unknown
component: Urea ABC transporter, urea binding protein
component: Urea ABC transporter, permease protein UrtC

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 16467
type: UnificationXref
id: CHEBI:16467
db: ChEBI

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Urea ABC transporter, ATP-binding protein UrtE
type: ProteinReference
xref: Reference/UniProt D0SNV8
organism: Acinetobacter junii SH205

ChemicalStructure/PW C000414
type: ChemicalStructure
structure format: SMILES

Reference/CAS 56-45-1
type: UnificationXref
id: 56-45-1
db: CAS

RNA/45/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Lysyl-tRNA(Lys)
stoichiometric coefficient: 1.0

Compound/PW C000104 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanine
stoichiometric coefficient: 1.0

L-Cysteinyl-tRNA(Cys)
type: Rna
entity reference: L-Cysteinyl-tRNA(Cys)

tRNA(Cys)
type: Rna
entity reference: tRNA(Cys)

Reference/UniProt D0SN88
type: UnificationXref
id: D0SN88
db: UniProt

L-Methionyl-tRNA(Met)
type: Rna
entity reference: L-Methionyl-tRNA(Met)

tRNA(Phe)
type: Rna
entity reference: tRNA(Phe)

tRNA(Pro)
type: Rna
entity reference: tRNA(Pro)

L-Prolyl-tRNA(Pro)
type: Rna
entity reference: L-Prolyl-tRNA(Pro)

tRNA(Arg)
type: Rna
entity reference: tRNA(Arg)

L-Arginyl-tRNA(Arg)
type: Rna
entity reference: L-Arginyl-tRNA(Arg)

Reference/CAS 74-79-3
type: UnificationXref
id: 74-79-3
db: CAS

Hydrogen Ion
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: Hydrogen Ion

RNA/39/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Ile)
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000517
type: UnificationXref
id: HMDB0000517
db: HMDB

NADH-quinone oxidoreductase subunit J
type: Protein
entity reference: NADH-quinone oxidoreductase subunit J

Reference/UniProt D0SL54
type: UnificationXref
id: D0SL54
db: UniProt

Reference/UniProt D0SRA5
type: UnificationXref
id: D0SRA5
db: UniProt

Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

RNA/12/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Pro)
stoichiometric coefficient: 1.0

Compound/PW C000109 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Threonine
stoichiometric coefficient: 1.0

L-Valine
type: SmallMoleculeReference
xref: Reference/CAS 72-18-4
xref: Reference/PubChem-compound 6287
xref: Reference/ChemSpider 6050
xref: Reference/HMDB HMDB0000883
xref: Reference/KEGG Compound C00183
xref: Reference/ChEBI CHEBI 16414
xref: Reference/BioCyc VAL
chemical formula: C5H11NO2
molecular weight: 117.07898
structure: ChemicalStructure/PW C000704

Reference/PubChem-compound 6022
type: UnificationXref
id: 6022
db: PubChem-compound

ReactionCoupledTransport10208
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000112 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: Adenosine diphosphate
right: L-Isoleucine
right: Hydrogen Ion
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Isoleucine
name: Adenosine triphosphate + L-Isoleucine + Water → Adenosine diphosphate + Hydrogen Ion + L-Isoleucine + Phosphate
conversion direction: LEFT_TO_RIGHT

ReactionCoupledTransport10207
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C000704 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170 Inner Membrane/Stoichiometry/1.0
right: Adenosine diphosphate
right: Pyrophosphate
right: Hydrogen Ion
right: L-Valine
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Valine
name: Adenosine triphosphate + L-Valine + Water → Adenosine diphosphate + Hydrogen Ion + L-Valine + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.15
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/11/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000106/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/12/Stoichiometry/1.0
right: L-Prolyl-tRNA(Pro)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.15
left: tRNA(Pro)
left: Hydrogen Ion
left: L-Proline
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Proline + tRNA(Pro) → Adenosine monophosphate + L-Prolyl-tRNA(Pro) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

ReactionCoupledTransport10206
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C000540 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: L-Leucine
right: Adenosine diphosphate
right: Hydrogen Ion
spontaneous: false
left: Water
left: L-Leucine
left: Adenosine triphosphate
name: Adenosine triphosphate + L-Leucine + Water → Adenosine diphosphate + Hydrogen Ion + L-Leucine + Phosphate
conversion direction: LEFT_TO_RIGHT

ReactionCoupledTransport10205
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000396 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: Adenosine diphosphate
right: Hydrogen Ion
right: L-Arginine
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Arginine
name: Adenosine triphosphate + L-Arginine + Water → Adenosine diphosphate + Hydrogen Ion + L-Arginine + Phosphate
conversion direction: LEFT_TO_RIGHT

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Reference/BioCyc CYS
type: UnificationXref
id: CYS
db: BioCyc

RNA/40/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Isoleucyl-tRNA(Ile)
stoichiometric coefficient: 1.0

Reference/PubChem-compound 6267
type: UnificationXref
id: 6267
db: PubChem-compound

Compound/PW C000103 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tyrosine
stoichiometric coefficient: 1.0

L-Tyrosine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Tyrosine

ReactionCoupledTransport10209
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000116 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: L-Histidine
right: Adenosine diphosphate
right: Hydrogen Ion
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Histidine
name: Adenosine triphosphate + L-Histidine + Water → Adenosine diphosphate + Hydrogen Ion + L-Histidine + Phosphate
conversion direction: LEFT_TO_RIGHT

Protein/46290/Stoichiometry/2.0
type: Stoichiometry
physical entity: Phenylalanine--tRNA ligase alpha subunit
stoichiometric coefficient: 2.0

Reference/INSDC 946416
type: UnificationXref
id: 946416
db: INSDC

Compound/PW C040034/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

RNA/4/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Asparaginyl-tRNA(Asn)
stoichiometric coefficient: 1.0

ReactionCoupledTransport10212
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C000106 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: L-Proline
right: Adenosine diphosphate
right: Hydrogen Ion
spontaneous: false
left: Water
left: L-Proline
left: Adenosine triphosphate
name: Adenosine triphosphate + L-Proline + Water → Adenosine diphosphate + Hydrogen Ion + L-Proline + Phosphate
conversion direction: LEFT_TO_RIGHT

Reference/INSDC 945331
type: UnificationXref
id: 945331
db: INSDC

6.1.1.18
type: BiochemicalReaction
participant stoichiometry: RNA/41/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000500/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034/Stoichiometry/1.0
participant stoichiometry: RNA/42/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine diphosphate
right: L-Glutaminyl-tRNA(Gln)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.18
left: tRNA(Gln)
left: Hydrogen Ion
left: L-Glutamine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Glutamine + tRNA(Gln) → Adenosine diphosphate + L-Glutaminyl-tRNA(Gln) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.12
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000123/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/6/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/5/Stoichiometry/1.0
right: Adenosine monophosphate
right: Pyrophosphate
right: L-Aspartyl-tRNA(Asp)
spontaneous: false
EC number: 6.1.1.12
left: L-Aspartic acid
left: Hydrogen Ion
left: tRNA(Asp)
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Aspartic acid + tRNA(Asp) → Adenosine monophosphate + L-Aspartyl-tRNA(Asp) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.5
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000112/Stoichiometry/1.0
participant stoichiometry: RNA/39/Stoichiometry/1.0
participant stoichiometry: RNA/40/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: L-Isoleucyl-tRNA(Ile)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.5
left: L-Isoleucine
left: Hydrogen Ion
left: tRNA(Ile)
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Isoleucine + tRNA(Ile) → Adenosine monophosphate + L-Isoleucyl-tRNA(Ile) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/ChemSpider 5833
type: UnificationXref
id: 5833
db: ChemSpider

6.1.1.20
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: RNA/20/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000104/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/19/Stoichiometry/1.0
right: L-Phenylalanyl-tRNA(Phe)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.20
left: Hydrogen Ion
left: L-Phenylalanine
left: tRNA(Phe)
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Phenylalanine + tRNA(Phe) → Adenosine monophosphate + L-Phenylalanyl-tRNA(Phe) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.22
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000110/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: RNA/4/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/3/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: Pyrophosphate
right: L-Asparaginyl-tRNA(Asn)
spontaneous: false
EC number: 6.1.1.22
left: tRNA(Asn)
left: L-Asparagine
left: Hydrogen Ion
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Asparagine + tRNA(Asn) → Adenosine monophosphate + L-Asparaginyl-tRNA(Asn) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/21/Stoichiometry/1.0
participant stoichiometry: RNA/22/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000103/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: L-Tyrosyl-tRNA(Tyr)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.1
left: tRNA(Tyr)
left: Hydrogen Ion
left: L-Tyrosine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Tyrosine + tRNA(Tyr) → Adenosine monophosphate + L-Tyrosyl-tRNA(Tyr) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc ATP
type: UnificationXref
id: ATP
db: BioCyc

6.1.1.2
type: BiochemicalReaction
participant stoichiometry: RNA/25/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000741/Stoichiometry/1.0
participant stoichiometry: RNA/43/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: L-Tryptophyl-tRNA(Trp)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.2
left: tRNA(Trp)
left: Hydrogen Ion
left: L-Tryptophan
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Tryptophan + tRNA(Trp) → Adenosine monophosphate + L-Tryptophyl-tRNA(Trp) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.10
type: BiochemicalReaction
participant stoichiometry: RNA/9/Stoichiometry/1.0
participant stoichiometry: RNA/17/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000548/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: L-Methionyl-tRNA(Met)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.10
left: Hydrogen Ion
left: tRNA(Met)
left: L-Methionine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Methionine + tRNA(Met) → Adenosine monophosphate + L-Methionyl-tRNA(Met) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

3.6.3.-
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000548 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: Adenosine diphosphate
right: Hydrogen Ion
right: L-Methionine
spontaneous: false
EC number: 3.6.3.-
left: Water
left: Adenosine triphosphate
left: L-Methionine
name: Adenosine triphosphate + L-Methionine + Water → Adenosine diphosphate + Hydrogen Ion + L-Methionine + Phosphate
conversion direction: LEFT_TO_RIGHT

ReactionCoupledTransport10210
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000118 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: L-Lysine
right: Adenosine diphosphate
right: Hydrogen Ion
spontaneous: false
left: Water
left: L-Lysine
left: Adenosine triphosphate
name: Adenosine triphosphate + L-Lysine + Water → Adenosine diphosphate + Hydrogen Ion + L-Lysine + Phosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.21
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: RNA/23/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/24/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000116/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: L-Histidyl-tRNA(His)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.21
left: tRNA(His)
left: Hydrogen Ion
left: L-Histidine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Histidine + tRNA(His) → Adenosine monophosphate + L-Histidyl-tRNA(His) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.6
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000118/Stoichiometry/1.0
participant stoichiometry: RNA/44/Stoichiometry/1.0
participant stoichiometry: RNA/45/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: L-Lysyl-tRNA(Lys)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.6
left: tRNA(Lys)
left: Hydrogen Ion
left: L-Lysine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Lysine + tRNA(Lys) → Adenosine monophosphate + L-Lysyl-tRNA(Lys) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Compound/PW C000095/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamic acid
stoichiometric coefficient: 1.0

Reference/BioCyc PRO
type: UnificationXref
id: PRO
db: BioCyc

Reference/INSDC 945336
type: UnificationXref
id: 945336
db: INSDC

Reference/UniProt D0SJC3
type: UnificationXref
id: D0SJC3
db: UniProt

Reference/PubChem-compound 6287
type: UnificationXref
id: 6287
db: PubChem-compound

Reference/PubChem-compound 6288
type: UnificationXref
id: 6288
db: PubChem-compound

Reference/ChEBI CHEBI 17203
type: UnificationXref
id: CHEBI:17203
db: ChEBI

Reference/UniProt D0SLI2
type: UnificationXref
id: D0SLI2
db: UniProt

Compound/PW C000540 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Leucine
stoichiometric coefficient: 1.0

Compound/PW C001034/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine diphosphate
stoichiometric coefficient: 1.0

Reference/BioCyc ASN
type: UnificationXref
id: ASN
db: BioCyc

Compound/PW C000548 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Methionine
stoichiometric coefficient: 1.0

Protein/35895 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Sulfate/thiosulfate import ATP-binding protein CysA
stoichiometric coefficient: 2.0

Reference/BioCyc TYR
type: UnificationXref
id: TYR
db: BioCyc

Reference/BioCyc ARG
type: UnificationXref
id: ARG
db: BioCyc

Reference/ChemSpider 5858
type: UnificationXref
id: 5858
db: ChemSpider

Compound/PW C000704 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Valine
stoichiometric coefficient: 1.0

Reference/PubChem-compound 6274
type: UnificationXref
id: 6274
db: PubChem-compound

L-Valine
type: SmallMolecule
entity reference: L-Valine

Compound/PW C000104/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanine
stoichiometric coefficient: 1.0

ABC transporter, ATP-binding protein
type: Protein
cellular location: Inner Membrane
entity reference: ABC transporter, ATP-binding protein

RNA/11/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Prolyl-tRNA(Pro)
stoichiometric coefficient: 1.0

RNA/13/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Arginyl-tRNA(Arg)
stoichiometric coefficient: 1.0

Compound/PW C000078 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glycine
stoichiometric coefficient: 1.0

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Compound/PW C000110 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Asparagine
stoichiometric coefficient: 1.0

Reference/CAS 73-22-3
type: UnificationXref
id: 73-22-3
db: CAS

Reference/BioCyc PPI
type: UnificationXref
id: PPI
db: BioCyc

RNA/2/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Alanyl-tRNA(Ala)
stoichiometric coefficient: 1.0

L-Glutamine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000641
xref: Reference/ChEBI CHEBI 18050
xref: Reference/ChemSpider 5746
xref: Reference/BioCyc GLN
xref: Reference/KEGG Compound C00064
xref: Reference/PubChem-compound 5961
xref: Reference/CAS 56-85-9
chemical formula: C5H10N2O3
molecular weight: 146.06914
structure: ChemicalStructure/PW C000500

ABC transporter, permease protein
type: ProteinReference
xref: Reference/UniProt D0SML2
organism: Acinetobacter junii SH205

NADH-quinone oxidoreductase subunit J
type: ProteinReference
xref: Reference/UniProt D0SKV5

L-Tryptophan
type: SmallMoleculeReference
xref: Reference/CAS 73-22-3
xref: Reference/KEGG Compound C00078
xref: Reference/ChEBI CHEBI 16828
xref: Reference/PubChem-compound 6305
xref: Reference/BioCyc TRP
xref: Reference/HMDB HMDB0000929
xref: Reference/ChemSpider 6066
chemical formula: C11H12N2O2
molecular weight: 204.08987
structure: ChemicalStructure/PW C000741

Cytosol
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005829

Reference/ChemSpider 5880
type: UnificationXref
id: 5880
db: ChemSpider

RNA/17/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Methionyl-tRNA(Met)
stoichiometric coefficient: 1.0

RNA/44/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Lys)
stoichiometric coefficient: 1.0

Reference/BioCyc LEU
type: UnificationXref
id: LEU
db: BioCyc

Reference/ChEBI CHEBI 18361
type: UnificationXref
id: CHEBI:18361
db: ChEBI

Reference/ChEBI CHEBI 18366
type: UnificationXref
id: CHEBI:18366
db: ChEBI

Reference/ChEBI CHEBI 18367
type: UnificationXref
id: CHEBI:18367
db: ChEBI

Reference/ChemSpider 1032
type: UnificationXref
id: 1032
db: ChemSpider

Reference/KEGG Compound C00123
type: UnificationXref
id: C00123
db: KEGG Compound

Protein/46298/Stoichiometry/2.0
type: Stoichiometry
physical entity: Lysine--tRNA ligase-like protein GenX
stoichiometric coefficient: 2.0

Sulfate/thiosulfate import ATP-binding protein CysA
type: Protein
cellular location: Inner Membrane
entity reference: Sulfate/thiosulfate import ATP-binding protein CysA

Unknown
type: ProteinReference

Compound/PW C000106/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Proline
stoichiometric coefficient: 1.0

Compound/PW C000116/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Histidine
stoichiometric coefficient: 1.0

ABC transporter, ATP-binding protein
type: ProteinReference
xref: Reference/UniProt D0SML3
organism: Acinetobacter junii SH205

6.1.1.19
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000396/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/14/Stoichiometry/1.0
participant stoichiometry: RNA/13/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: L-Arginyl-tRNA(Arg)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.19
left: L-Arginine
left: tRNA(Arg)
left: Hydrogen Ion
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Arginine + tRNA(Arg) → Adenosine monophosphate + L-Arginyl-tRNA(Arg) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/PubChem-compound 44367445
type: UnificationXref
id: 44367445
db: PubChem-compound

6.1.1.7
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000105/Stoichiometry/1.0
participant stoichiometry: DNA/1/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/2/Stoichiometry/1.0
right: L-Alanyl-tRNA(Ala)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.7
left: Hydrogen Ion
left: tRNA(Ala)
left: L-Alanine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Alanine + tRNA(Ala) → Adenosine monophosphate + L-Alanyl-tRNA(Ala) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.14
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000078/Stoichiometry/1.0
participant stoichiometry: RNA/31/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/29/Stoichiometry/1.0
right: Adenosine monophosphate
right: Glycyl-tRNA(Gly)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.14
left: tRNA(gly)
left: Glycine
left: Hydrogen Ion
left: Adenosine triphosphate
name: Adenosine triphosphate + Glycine + Hydrogen Ion + tRNA(gly) → Adenosine monophosphate + Glycyl-tRNA(Gly) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.16
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000448/Stoichiometry/1.0
participant stoichiometry: RNA/16/Stoichiometry/1.0
participant stoichiometry: RNA/15/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: L-Cysteinyl-tRNA(Cys)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.16
left: Hydrogen Ion
left: tRNA(Cys)
left: L-Cysteine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Cysteine + tRNA(Cys) → Adenosine monophosphate + L-Cysteinyl-tRNA(Cys) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.17
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000095/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/7/Stoichiometry/1.0
participant stoichiometry: RNA/8/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: Pyrophosphate
right: L-Glutamyl-tRNA(Glu)
spontaneous: false
EC number: 6.1.1.17
left: L-Glutamic acid
left: Hydrogen Ion
left: tRNA(Glu)
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Glutamic acid + tRNA(Glu) → Adenosine monophosphate + L-Glutamyl-tRNA(Glu) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.4
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: RNA/35/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000540/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/36/Stoichiometry/1.0
right: L-Leucyl-tRNA(Leu)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.4
left: L-Leucine
left: Hydrogen Ion
left: tRNA(Leu)
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Leucine + tRNA(Leu) → Adenosine monophosphate + L-Leucyl-tRNA(Leu) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.9
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: RNA/38/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000704/Stoichiometry/1.0
participant stoichiometry: RNA/37/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Adenosine monophosphate
right: L-Valyl-tRNA(Val)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.9
left: L-Valine
left: Hydrogen Ion
left: tRNA(Val)
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Valine + tRNA(Val) → Adenosine monophosphate + L-Valyl-tRNA(Val) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

6.1.1.11
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/32/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
participant stoichiometry: RNA/26/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000120/Stoichiometry/1.0
right: Adenosine monophosphate
right: L-Seryl-tRNA(Ser)
right: Pyrophosphate
spontaneous: false
EC number: 6.1.1.11
left: tRNA(Ser)
left: Hydrogen Ion
left: L-Serine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Serine + tRNA(Ser) → Adenosine monophosphate + L-Seryl-tRNA(Ser) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

Reference/KEGG Compound C00135
type: UnificationXref
id: C00135
db: KEGG Compound

Reaction663977
type: BiochemicalReaction
participant stoichiometry: RNA/33/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000109/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000170/Stoichiometry/1.0
participant stoichiometry: RNA/34/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: L-Threonyl-tRNA(Thr)
right: Adenosine monophosphate
right: Pyrophosphate
spontaneous: false
left: tRNA(Thr)
left: Hydrogen Ion
left: L-Threonine
left: Adenosine triphosphate
name: Adenosine triphosphate + Hydrogen Ion + L-Threonine + tRNA(Thr) → Adenosine monophosphate + L-Threonyl-tRNA(Thr) + Pyrophosphate
conversion direction: LEFT_TO_RIGHT

RNA/6/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Aspartyl-tRNA(Asp)
stoichiometric coefficient: 1.0

L-Leucine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Leucine

L-Glutamine
type: SmallMolecule
entity reference: L-Glutamine

L-Tryptophan
type: SmallMolecule
entity reference: L-Tryptophan

Reference/ChemSpider 5653
type: UnificationXref
id: 5653
db: ChemSpider

Reference/KEGG Compound C00148
type: UnificationXref
id: C00148
db: KEGG Compound

L-Threonine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Threonine

L-Methionine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000696
xref: Reference/ChEBI CHEBI 16643
xref: Reference/KEGG Compound C00073
xref: Reference/CAS 63-68-3
xref: Reference/BioCyc MET
xref: Reference/PubChem-compound 6137
xref: Reference/ChemSpider 5907
chemical formula: C5H11NO2S
molecular weight: 149.05106
structure: ChemicalStructure/PW C000548

ABC transporter, permease protein
type: ProteinReference
xref: Reference/UniProt D0SKB2
organism: Acinetobacter junii SH205

Reference/KEGG Compound C00152
type: UnificationXref
id: C00152
db: KEGG Compound

DNA/1/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Ala)
stoichiometric coefficient: 1.0

Reference/BioCyc AMP
type: UnificationXref
id: AMP
db: BioCyc

Compound/PW C000112/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Isoleucine
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000250
type: UnificationXref
id: HMDB0000250
db: HMDB

Reference/HMDB HMDB0001341
type: UnificationXref
id: HMDB0001341
db: HMDB

L-Phenylalanine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Phenylalanine

ABC transporter, substrate-binding protein, aliphatic sulfonates family
type: Protein
cellular location: Inner Membrane
entity reference: ABC transporter, substrate-binding protein, aliphatic sulfonates family

Compound/PW C000170/Stoichiometry/1.0
type: Stoichiometry
physical entity: Pyrophosphate
stoichiometric coefficient: 1.0

Reference/INSDC 944884
type: UnificationXref
id: 944884
db: INSDC

Reference/BioCyc TRP
type: UnificationXref
id: TRP
db: BioCyc

Reference/UniProt D0SRK2
type: UnificationXref
id: D0SRK2
db: UniProt

Compound/PW C000110/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Asparagine
stoichiometric coefficient: 1.0

Compound/PW C000120 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Serine
stoichiometric coefficient: 1.0

ABC transporter, ATP-binding protein
type: Protein
cellular location: Inner Membrane
entity reference: ABC transporter, ATP-binding protein

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

L-Arginine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Arginine

Reference/CAS 61-19-8
type: UnificationXref
id: 61-19-8
db: CAS

ChemicalStructure/PW C000032
type: ChemicalStructure
structure format: SMILES

RNA/23/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(His)
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00183
type: UnificationXref
id: C00183
db: KEGG Compound

Reference/CAS 56-86-0
type: UnificationXref
id: 56-86-0
db: CAS

Reference/CAS 63-68-3
type: UnificationXref
id: 63-68-3
db: CAS

Reference/INSDC 945501
type: UnificationXref
id: 945501
db: INSDC

RNA/21/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Tyr)
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00188
type: UnificationXref
id: C00188
db: KEGG Compound

Reference/ChEBI CHEBI 17053
type: UnificationXref
id: CHEBI:17053
db: ChEBI

Reference/ChEBI CHEBI 17295
type: UnificationXref
id: CHEBI:17295
db: ChEBI

Reference/CAS 56-40-6
type: UnificationXref
id: 56-40-6
db: CAS

L-Methionine
type: SmallMolecule
entity reference: L-Methionine

Reference/HMDB HMDB0000045
type: UnificationXref
id: HMDB0000045
db: HMDB

L-Leucine
type: SmallMolecule
entity reference: L-Leucine

L-Leucine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000687
xref: Reference/ChEBI CHEBI 15603
xref: Reference/CAS 61-90-5
xref: Reference/BioCyc LEU
xref: Reference/PubChem-compound 6106
xref: Reference/KEGG Compound C00123
xref: Reference/ChemSpider 5880
chemical formula: C6H13NO2
molecular weight: 131.09464
structure: ChemicalStructure/PW C000540

Reference/BioCyc PHE
type: UnificationXref
id: PHE
db: BioCyc

Reference/ChEBI CHEBI 29265
type: UnificationXref
id: CHEBI:29265
db: ChEBI

L-Threonine
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000167
xref: Reference/PubChem-compound 6288
xref: Reference/CAS 72-19-5
xref: Reference/ChemSpider 6051
xref: Reference/ChEBI CHEBI 16857
xref: Reference/KEGG Compound C00188
xref: Reference/BioCyc THR
chemical formula: C4H9NO3
molecular weight: 119.05824
structure: ChemicalStructure/PW C000109

L-Proline
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 17203
xref: Reference/ChemSpider 128566
xref: Reference/BioCyc PRO
xref: Reference/CAS 147-85-3
xref: Reference/KEGG Compound C00148
xref: Reference/HMDB HMDB0000162
xref: Reference/PubChem-compound 145742
chemical formula: C5H9NO2
molecular weight: 115.06333
structure: ChemicalStructure/PW C000106

L-Alanine
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00041
xref: Reference/ChemSpider 5735
xref: Reference/ChEBI CHEBI 16977
xref: Reference/BioCyc L-ALPHA-ALANINE
xref: Reference/HMDB HMDB0000161
xref: Reference/CAS 56-41-7
xref: Reference/PubChem-compound 5950
chemical formula: C3H7NO2
molecular weight: 89.047676
structure: ChemicalStructure/PW C000105

L-Phenylalanine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 6140
xref: Reference/HMDB HMDB0000159
xref: Reference/ChemSpider 5910
xref: Reference/ChEBI CHEBI 17295
xref: Reference/BioCyc PHE
xref: Reference/CAS 63-91-2
xref: Reference/KEGG Compound C00079
chemical formula: C9H11NO2
molecular weight: 165.07898
structure: ChemicalStructure/PW C000104

Reference/ChemSpider 5800
type: UnificationXref
id: 5800
db: ChemSpider

L-Tyrosine
type: SmallMoleculeReference
xref: Reference/CAS 60-18-4
xref: Reference/PubChem-compound 6057
xref: Reference/HMDB HMDB0000158
xref: Reference/ChEBI CHEBI 17895
xref: Reference/KEGG Compound C00082
xref: Reference/ChemSpider 5833
xref: Reference/BioCyc TYR
chemical formula: C9H11NO3
molecular weight: 181.0739
structure: ChemicalStructure/PW C000103

Compound/PW C000078 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glycine
stoichiometric coefficient: 1.0

Reference/ChemSpider 730
type: UnificationXref
id: 730
db: ChemSpider

Compound/PW C000118/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Lysine
stoichiometric coefficient: 1.0

L-Isoleucine
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00407
xref: Reference/ChEBI CHEBI 17191
xref: Reference/PubChem-compound 6306
xref: Reference/HMDB HMDB0000172
xref: Reference/BioCyc ILE
xref: Reference/ChemSpider 6067
xref: Reference/CAS 73-32-5
chemical formula: C6H13NO2
molecular weight: 131.09464
structure: ChemicalStructure/PW C000112

L-Asparagine
type: SmallMoleculeReference
xref: Reference/ChemSpider 6031
xref: Reference/HMDB HMDB0000168
xref: Reference/CAS 70-47-3
xref: Reference/ChEBI CHEBI 17196
xref: Reference/BioCyc ASN
xref: Reference/KEGG Compound C00152
xref: Reference/PubChem-compound 6267
chemical formula: C4H8N2O3
molecular weight: 132.0535
structure: ChemicalStructure/PW C000110

ChemicalStructure/PW C000095
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CCC(O)=O)C(O)=O

Reference/PubChem-compound 6057
type: UnificationXref
id: 6057
db: PubChem-compound

Urea ABC transporter, ATP-binding protein UrtE
type: Protein
cellular location: Inner Membrane
entity reference: Urea ABC transporter, ATP-binding protein UrtE

L-Lysine
type: SmallMoleculeReference
xref: Reference/BioCyc LYS
xref: Reference/ChEBI CHEBI 18019
xref: Reference/ChemSpider 5747
xref: Reference/CAS 56-87-1
xref: Reference/HMDB HMDB0000182
xref: Reference/PubChem-compound 5962
xref: Reference/KEGG Compound C00047
chemical formula: C6H14N2O2
molecular weight: 146.10553
structure: ChemicalStructure/PW C000118

L-Histidine
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15971
xref: Reference/HMDB HMDB0000177
xref: Reference/PubChem-compound 6274
xref: Reference/ChemSpider 6038
xref: Reference/CAS 71-00-1
xref: Reference/BioCyc HIS
xref: Reference/KEGG Compound C00135
chemical formula: C6H9N3O2
molecular weight: 155.06947
structure: ChemicalStructure/PW C000116

Compound/PW C000104 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanine
stoichiometric coefficient: 1.0

Reference/CAS 58-64-0
type: UnificationXref
id: 58-64-0
db: CAS

L-Aspartic acid
type: SmallMolecule
entity reference: L-Aspartic acid

L-Serine
type: SmallMolecule
entity reference: L-Serine

L-Aspartic acid
type: SmallMoleculeReference
xref: Reference/PubChem-compound 44367445
xref: Reference/ChemSpider 5745
xref: Reference/ChEBI CHEBI 17053
xref: Reference/HMDB HMDB0000191
xref: Reference/CAS 56-84-8
xref: Reference/KEGG Compound C00049
xref: Reference/BioCyc L-ASPARTATE
chemical formula: C4H7NO4
molecular weight: 133.0375
structure: ChemicalStructure/PW C000123

L-Serine
type: SmallMoleculeReference
xref: Reference/ChemSpider 5736
xref: Reference/ChEBI CHEBI 17115
xref: Reference/CAS 56-45-1
xref: Reference/KEGG Compound C00065
xref: Reference/PubChem-compound 5951
xref: Reference/HMDB HMDB0000187
xref: Reference/BioCyc SER
chemical formula: C3H7NO3
molecular weight: 105.042595
structure: ChemicalStructure/PW C000120

RNA/15/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Cys)
stoichiometric coefficient: 1.0

Reference/PubChem-compound 6083
type: UnificationXref
id: 6083
db: PubChem-compound

L-Histidine
type: SmallMolecule
entity reference: L-Histidine

Pyrophosphate
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Pyrophosphate

L-Lysine
type: SmallMolecule
entity reference: L-Lysine

Glycine
type: SmallMolecule
cellular location: Cytosol
entity reference: Glycine

L-Isoleucine
type: SmallMolecule
entity reference: L-Isoleucine

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

L-Asparagine
type: SmallMolecule
entity reference: L-Asparagine

ChemicalStructure/PW C000078
type: ChemicalStructure
structure format: SMILES
structure data: NCC(O)=O

glycine betaine / proline ABC transporter
type: Complex
component stoichiometry: Protein/40013 Inner Membrane/Stoichiometry/2.0
component stoichiometry: Protein/33759 Inner Membrane/Stoichiometry/2.0
cellular location: Inner Membrane
component: ABC transporter, ATP-binding protein
component: ABC transporter, permease protein
component: Transcriptional regulator, AraC family

Reference/UniProt D0SNH6
type: UnificationXref
id: D0SNH6
db: UniProt

Reference/UniProt D0SNJ3
type: UnificationXref
id: D0SNJ3
db: UniProt

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

ABC transporter, ATP-binding protein
type: ProteinReference
xref: Reference/UniProt D0SHW6
organism: Acinetobacter junii SH205

L-Alanine
type: SmallMolecule
entity reference: L-Alanine

Reference/CAS 56-84-8
type: UnificationXref
id: 56-84-8
db: CAS

L-Phenylalanine
type: SmallMolecule
entity reference: L-Phenylalanine

L-Tyrosine
type: SmallMolecule
entity reference: L-Tyrosine

L-Threonine
type: SmallMolecule
entity reference: L-Threonine

RNA/29/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glycyl-tRNA(Gly)
stoichiometric coefficient: 1.0

L-Proline
type: SmallMolecule
entity reference: L-Proline

Reference/CAS 70-47-3
type: UnificationXref
id: 70-47-3
db: CAS

Compound/PW C000396 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Arginine
stoichiometric coefficient: 1.0

RNA/8/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Glu)
stoichiometric coefficient: 1.0

RNA/42/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutaminyl-tRNA(Gln)
stoichiometric coefficient: 1.0

Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Phosphate
stoichiometric coefficient: 1.0

Reference/PathWhiz PW399211
type: UnificationXref
id: PW399211
db: PathWhiz

Reference/ChEBI CHEBI 15603
type: UnificationXref
id: CHEBI:15603
db: ChEBI

Reference/INSDC 948275
type: UnificationXref
id: 948275
db: INSDC

L-Glutamine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Glutamine

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

L-Arginine
type: SmallMoleculeReference
xref: Reference/BioCyc ARG
xref: Reference/ChEBI CHEBI 16467
xref: Reference/CAS 74-79-3
xref: Reference/KEGG Compound C00062
xref: Reference/ChemSpider 6082
xref: Reference/PubChem-compound 28782
xref: Reference/HMDB HMDB0000517
chemical formula: C6H14N4O2
molecular weight: 174.11168
structure: ChemicalStructure/PW C000396

Pyrophosphate
type: SmallMolecule
entity reference: Pyrophosphate

Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine diphosphate
stoichiometric coefficient: 1.0

Compound/PW C000414/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 1.0

ChemicalStructure/PW C000103
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC1=CC=C(O)C=C1)C(O)=O

Reference/BioCyc ADP
type: UnificationXref
id: ADP
db: BioCyc

Sulfatase-modifying factor enzyme domain-containing protein
type: Protein
cellular location: Inner Membrane
entity reference: Sulfatase-modifying factor enzyme domain-containing protein

RNA/35/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Leu)
stoichiometric coefficient: 1.0

Reference/BioCyc THR
type: UnificationXref
id: THR
db: BioCyc

Reference/ChemSpider 6038
type: UnificationXref
id: 6038
db: ChemSpider

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

ChemicalStructure/PW C000548
type: ChemicalStructure
structure format: SMILES
structure data: CSCC[C@H](N)C(O)=O

Urea ABC transporter, permease protein UrtB
type: Protein
cellular location: Inner Membrane
entity reference: Urea ABC transporter, permease protein UrtB

Reference/GENE ONTOLOGY GO 0005829
type: UnificationXref
id: GO:0005829
db: GENE ONTOLOGY

L-Arginine
type: SmallMolecule
entity reference: L-Arginine

TransportCatalysis31901
type: Catalysis
controller: Unknown
controlled: Transport50540
control type: ACTIVATION

TransportCatalysis31900
type: Catalysis
controller: Unknown
controlled: Transport50539
control type: ACTIVATION

DUF490 domain-containing protein
type: Protein
cellular location: Inner Membrane
entity reference: DUF490 domain-containing protein

Compound/PW C000448/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Cysteine
stoichiometric coefficient: 1.0

TransportCatalysis31905
type: Catalysis
controller: Proline-specific permease ProY
controlled: Transport50544
control type: ACTIVATION

TransportCatalysis31904
type: Catalysis
controller: Proline-specific permease ProY
controlled: Transport50543
control type: ACTIVATION

TransportCatalysis31903
type: Catalysis
controller: Proline-specific permease ProY
controlled: Transport50542
control type: ACTIVATION

TransportCatalysis31902
type: Catalysis
controller: Unknown
controlled: Transport50541
control type: ACTIVATION

Protein/33760 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: ABC transporter, permease protein
stoichiometric coefficient: 2.0

Reference/PubChem-compound 5862
type: UnificationXref
id: 5862
db: PubChem-compound

Reference/UniProt D0SHR6
type: UnificationXref
id: D0SHR6
db: UniProt

Reference/UniProt D0SLZ8
type: UnificationXref
id: D0SLZ8
db: UniProt

Reference/GENE ONTOLOGY GO 0070258
type: UnificationXref
id: GO:0070258
db: GENE ONTOLOGY

L-Valine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Valine

Reference/UniProt D0SI34
type: UnificationXref
id: D0SI34
db: UniProt

Reference/UniProt D0SQC9
type: UnificationXref
id: D0SQC9
db: UniProt

Reference/ChemSpider 6031
type: UnificationXref
id: 6031
db: ChemSpider

Reference/HMDB HMDB0000687
type: UnificationXref
id: HMDB0000687
db: HMDB

TransportCatalysis31906
type: Catalysis
controller: Proline-specific permease ProY
controlled: Transport50545
control type: ACTIVATION

Reference/BioCyc GLY
type: UnificationXref
id: GLY
db: BioCyc

Reference/ChEBI CHEBI 16977
type: UnificationXref
id: CHEBI:16977
db: ChEBI

Compound/PW C000112 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Isoleucine
stoichiometric coefficient: 1.0

RNA/33/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Thr)
stoichiometric coefficient: 1.0

Compound/PW C000741 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tryptophan
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000696
type: UnificationXref
id: HMDB0000696
db: HMDB

ABC transporter, substrate-binding protein, aliphatic sulfonates family
type: Protein
cellular location: Inner Membrane
entity reference: ABC transporter, substrate-binding protein, aliphatic sulfonates family

Oxidoreductase, short chain dehydrogenase/reductase family protein
type: Protein
cellular location: Inner Membrane
entity reference: Oxidoreductase, short chain dehydrogenase/reductase family protein

Hydrogen Ion
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Hydrogen Ion

ReactionCoupledTransportCatalysis10271
type: Catalysis
controller: histidine ABC transporter
controlled: ReactionCoupledTransport10209
control type: ACTIVATION

ReactionCoupledTransportCatalysis10270
type: Catalysis
controller: branched chain amino acid ABC transporter
controlled: ReactionCoupledTransport10208
control type: ACTIVATION

ReactionCoupledTransportCatalysis10274
type: Catalysis
controller: glycine betaine / proline ABC transporter
controlled: ReactionCoupledTransport10212
control type: ACTIVATION

RNA/34/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Threonyl-tRNA(Thr)
stoichiometric coefficient: 1.0

ReactionCoupledTransportCatalysis10273
type: Catalysis
controller: L-methionine / D-methionine ABC transporter
controlled: 3.6.3.-
control type: ACTIVATION

ReactionCoupledTransportCatalysis10272
type: Catalysis
controller: lysine / arginine / ornithine ABC transporter
controlled: ReactionCoupledTransport10210
control type: ACTIVATION

Protein/46282/Stoichiometry/2.0
type: Stoichiometry
physical entity: Threonine--tRNA ligase
stoichiometric coefficient: 2.0

Inner Membrane
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0070258

Reference/UniProt D0SJX8
type: UnificationXref
id: D0SJX8
db: UniProt

tRNA(Ala)
type: DnaReference
xref: Reference/ChEBI CHEBI 29170

Reference/ChemSpider 6050
type: UnificationXref
id: 6050
db: ChemSpider

Compound/PW C000123 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Aspartic acid
stoichiometric coefficient: 1.0

Reference/PubChem-compound 5257127
type: UnificationXref
id: 5257127
db: PubChem-compound

Reference/ChemSpider 6051
type: UnificationXref
id: 6051
db: ChemSpider

Reference/BioCyc GLN
type: UnificationXref
id: GLN
db: BioCyc

Reference/BioCyc GLT
type: UnificationXref
id: GLT
db: BioCyc

Reference/UniProt D0SQE0
type: UnificationXref
id: D0SQE0
db: UniProt

Compound/PW C000120/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Serine
stoichiometric coefficient: 1.0

Compound/PW C000123/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Aspartic acid
stoichiometric coefficient: 1.0

Compound/PW C040034 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

L-Tyrosine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Tyrosine

ReactionCoupledTransportCatalysis10268
type: Catalysis
controller: branched chain amino acid ABC transporter
controlled: ReactionCoupledTransport10206
control type: ACTIVATION

ChemicalStructure/PW C000106
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)[C@@H]1CCCN1

ReactionCoupledTransportCatalysis10267
type: Catalysis
controller: L-arginine ABC transporter
controlled: ReactionCoupledTransport10205
control type: ACTIVATION

ChemicalStructure/PW C000105
type: ChemicalStructure
structure format: SMILES
structure data: C[C@H](N)C(O)=O

ChemicalStructure/PW C000104
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC1=CC=CC=C1)C(O)=O

L-Isoleucine
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Isoleucine

ChemicalStructure/PW C000109
type: ChemicalStructure
structure format: SMILES
structure data: C[C@@H](O)[C@H](N)C(O)=O

ReactionCoupledTransportCatalysis10269
type: Catalysis
controller: branched chain amino acid ABC transporter
controlled: ReactionCoupledTransport10207
control type: ACTIVATION

ChemicalStructure/PW C000110
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC(N)=O)C(O)=O

Pyrophosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 644102
xref: Reference/BioCyc PPI
xref: Reference/ChemSpider 559142
xref: Reference/ChEBI CHEBI 18361
xref: Reference/HMDB HMDB0000250
xref: Reference/CAS 14000-31-8
xref: Reference/KEGG Compound C00013
chemical formula: H4O7P2
molecular weight: 177.94322
structure: ChemicalStructure/PW C000170

Reference/ChemSpider 6082
type: UnificationXref
id: 6082
db: ChemSpider

ChemicalStructure/PW C000112
type: ChemicalStructure
structure format: SMILES
structure data: CC[C@H](C)[C@H](N)C(O)=O

Reference/GENE ONTOLOGY GO 0005620
type: UnificationXref
id: GO:0005620
db: GENE ONTOLOGY

ChemicalStructure/PW C000118
type: ChemicalStructure
structure format: SMILES
structure data: NCCCC[C@H](N)C(O)=O

ChemicalStructure/PW C000116
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC1=CN=CN1)C(O)=O

Protein/32672/Stoichiometry/2.0
type: Stoichiometry
physical entity: NADH-quinone oxidoreductase subunit J
stoichiometric coefficient: 2.0

Reference/ChemSpider 6067
type: UnificationXref
id: 6067
db: ChemSpider

Reference/ChemSpider 6066
type: UnificationXref
id: 6066
db: ChemSpider

ChemicalStructure/PW C000120
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CO)C(O)=O

Adenosine diphosphate
type: SmallMolecule
entity reference: Adenosine diphosphate

Adenosine diphosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00008
xref: Reference/PubChem-compound 6022
xref: Reference/ChemSpider 5800
xref: Reference/CAS 58-64-0
xref: Reference/BioCyc ADP
xref: Reference/ChEBI CHEBI 16761
xref: Reference/HMDB HMDB0001341
chemical formula: C10H15N5O10P2
molecular weight: 427.02942
structure: ChemicalStructure/PW C001034

ChemicalStructure/PW C000123
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC(O)=O)C(O)=O

Compound/PW C000704/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Valine
stoichiometric coefficient: 1.0

Reference/UniProt D0SI70
type: UnificationXref
id: D0SI70
db: UniProt

RNA/25/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tryptophyl-tRNA(Trp)
stoichiometric coefficient: 1.0

ReactionCoupledTransport6155
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C000123 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: Adenosine diphosphate
right: Hydrogen Ion
right: L-Aspartic acid
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Aspartic acid
name: Adenosine triphosphate + L-Aspartic acid + Water → Adenosine diphosphate + Hydrogen Ion + L-Aspartic acid + Phosphate
conversion direction: LEFT_TO_RIGHT

Compound/PW C000078/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glycine
stoichiometric coefficient: 1.0

methionyl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46286/Stoichiometry/2.0
component: Isoleucine--tRNA ligase

prolyl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46282/Stoichiometry/2.0
component: Threonine--tRNA ligase

Reference/PubChem-compound 6306
type: UnificationXref
id: 6306
db: PubChem-compound

Reference/BioCyc CPD-8587
type: UnificationXref
id: CPD-8587
db: BioCyc

Reference/PubChem-compound 6305
type: UnificationXref
id: 6305
db: PubChem-compound

RNA/24/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Histidyl-tRNA(His)
stoichiometric coefficient: 1.0

phenylalanyl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46291/Stoichiometry/2.0
component stoichiometry: Protein/46290/Stoichiometry/2.0
component: Phenylalanine--tRNA ligase alpha subunit
component: MerR, DNA binding protein

Phosphate
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Phosphate

seryl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46282/Stoichiometry/2.0
component: Threonine--tRNA ligase

Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 1.0

Reference/BioCyc ILE
type: UnificationXref
id: ILE
db: BioCyc

RNA/26/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Seryl-tRNA(Ser)
stoichiometric coefficient: 1.0

ChemicalStructure/PW C000741
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC1=CNC2=C1C=CC=C2)C(O)=O

histidyl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46297/Stoichiometry/2.0
component: Histidine--tRNA ligase

lysine tRNA synthetase
type: Complex
component stoichiometry: Protein/46298/Stoichiometry/2.0
component: Lysine--tRNA ligase-like protein GenX

Reference/ChEBI CHEBI 15422
type: UnificationXref
id: CHEBI:15422
db: ChEBI

ChemicalStructure/PW C000704
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)[C@H](N)C(O)=O

RNA/31/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(gly)
stoichiometric coefficient: 1.0

Reference/UniProt D0SNV8
type: UnificationXref
id: D0SNV8
db: UniProt

Reference/ChEBI CHEBI 16761
type: UnificationXref
id: CHEBI:16761
db: ChEBI

Compound/PW C000109/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Threonine
stoichiometric coefficient: 1.0

Compound/PW C000548/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Methionine
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15428
type: UnificationXref
id: CHEBI:15428
db: ChEBI

Compound/PW C000109 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Threonine
stoichiometric coefficient: 1.0

Urea ABC transporter, urea binding protein
type: Protein
cellular location: Inner Membrane
entity reference: Urea ABC transporter, urea binding protein

Reference/UniProt D0SNW2
type: UnificationXref
id: D0SNW2
db: UniProt

Reference/UniProt D0SNW1
type: UnificationXref
id: D0SNW1
db: UniProt

Reference/UniProt D0SNW0
type: UnificationXref
id: D0SNW0
db: UniProt

L-Serine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Serine

L-Proline
type: SmallMolecule
cellular location: Inner Membrane
entity reference: L-Proline

Reference/KEGG Compound C00407
type: UnificationXref
id: C00407
db: KEGG Compound

Sulfate/thiosulfate import ATP-binding protein CysA
type: ProteinReference
xref: Reference/UniProt D0SK30
organism: Acinetobacter junii SH205

Reference/UniProt D0SM58
type: UnificationXref
id: D0SM58
db: UniProt

Compound/PW C000741 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Tryptophan
stoichiometric coefficient: 1.0

Reference/BioCyc VAL
type: UnificationXref
id: VAL
db: BioCyc

ChemicalStructure/PW C000540
type: ChemicalStructure
structure format: SMILES
structure data: CC(C)C[C@H](N)C(O)=O

tRNA Charging
type: Pathway
pathway order: PathwayEnzymeReaction/5668117
pathway order: PathwayEnzymeReaction/5668118
pathway order: PathwayEnzymeReaction/5668115
pathway order: PathwayEnzymeReaction/5668116
pathway order: PathwayEnzymeReaction/5668113
pathway order: PathwayEnzymeReaction/5668114
pathway order: PathwayEnzymeReaction/5668111
pathway order: PathwayEnzymeReaction/5668112
pathway order: PathwayTransport/5668134
pathway order: PathwayEnzymeReaction/5668119
pathway order: PathwayTransport/5668135
pathway order: PathwayEnzymeReaction/5668091
pathway order: PathwayEnzymeReaction/5668098
pathway order: PathwayEnzymeReaction/5668099
pathway order: PathwayEnzymeReaction/5668110
pathway order: PathwayEnzymeReaction/5668096
pathway order: PathwayEnzymeReaction/5668097
pathway order: PathwayEnzymeReaction/5668094
pathway order: PathwayEnzymeReaction/5668095
pathway order: PathwayEnzymeReaction/5668092
pathway order: PathwayEnzymeReaction/5668093
pathway order: PathwayEnzymeReaction/5668104
pathway order: PathwayEnzymeReaction/5668105
pathway order: PathwayEnzymeReaction/5668102
pathway order: PathwayEnzymeReaction/5668103
pathway order: PathwayEnzymeReaction/5668100
pathway order: PathwayEnzymeReaction/5668122
pathway order: PathwayEnzymeReaction/5668101
pathway order: PathwayEnzymeReaction/5668123
pathway order: PathwayTransport/5668126
pathway order: PathwayTransport/5668129
pathway order: PathwayEnzymeReaction/5668108
pathway order: PathwayTransport/5668124
pathway order: PathwayEnzymeReaction/5668109
pathway order: PathwayTransport/5668125
pathway order: PathwayTransport/5668130
pathway order: PathwayTransport/5668131
pathway order: PathwayEnzymeReaction/5668120
pathway order: PathwayEnzymeReaction/5668121
pathway component: ReactionCoupledTransport7088
pathway component: Transport50541
pathway component: Transport50542
pathway component: ReactionCoupledTransportCatalysis6211
pathway component: TransportCatalysis31899
pathway component: Transport50543
pathway component: ReactionCoupledTransport6155
pathway component: Transport50544
pathway component: ReactionCoupledTransport10208
pathway component: ReactionCoupledTransport10207
pathway component: 6.1.1.15
pathway component: ReactionCoupledTransport10206
pathway component: ReactionCoupledTransport10205
pathway component: Transport50540
pathway component: ReactionCoupledTransportCatalysis6217
pathway component: Transport50545
pathway component: ReactionCatalysis659152
pathway component: ReactionCatalysis659151
pathway component: ReactionCatalysis659154
pathway component: ReactionCatalysis659153
pathway component: ReactionCatalysis659156
pathway component: ReactionCatalysis659155
pathway component: ReactionCatalysis659158
pathway component: ReactionCatalysis659157
pathway component: ReactionCoupledTransport10209
pathway component: ReactionCatalysis659150
pathway component: ReactionCoupledTransportCatalysis10271
pathway component: ReactionCoupledTransportCatalysis10270
pathway component: ReactionCoupledTransport10212
pathway component: 6.1.1.18
pathway component: 6.1.1.12
pathway component: ReactionCoupledTransportCatalysis10274
pathway component: ReactionCoupledTransportCatalysis10273
pathway component: 6.1.1.5
pathway component: ReactionCoupledTransportCatalysis10272
pathway component: ReactionCatalysis659149
pathway component: 6.1.1.20
pathway component: Transport50538
pathway component: ReactionCatalysis659148
pathway component: 6.1.1.22

L-Alanyl-tRNA(Ala)
type: RnaReference
xref: Reference/ChEBI CHEBI 17732

Protein/46280/Stoichiometry/2.0
type: Stoichiometry
physical entity: Glycine--tRNA ligase alpha subunit
stoichiometric coefficient: 2.0

L-Asparaginyl-tRNA(Asn)
type: RnaReference
xref: Reference/ChEBI CHEBI 29265

tRNA(Asn)
type: RnaReference
xref: Reference/ChEBI CHEBI 29172

L-Aspartyl-tRNA(Asp)
type: RnaReference
xref: Reference/ChEBI CHEBI 29158

tRNA(Asp)
type: RnaReference
xref: Reference/ChEBI CHEBI 29186

ABC transporter, permease protein
type: Protein
cellular location: Inner Membrane
entity reference: ABC transporter, permease protein

ChemicalStructure/PW C000500
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CCC(N)=O)C(O)=O

Reference/UniProt D0SLU3
type: UnificationXref
id: D0SLU3
db: UniProt

alanyl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46279/Stoichiometry/2.0
component: DUF4349 domain-containing protein

tRNA(Glu)
type: RnaReference
xref: Reference/ChEBI CHEBI 29175

L-Glutamyl-tRNA(Glu)
type: RnaReference
xref: Reference/ChEBI CHEBI 29157

glycyl-tRNA synthetase
type: Complex
component stoichiometry: Protein/46280/Stoichiometry/2.0
component stoichiometry: Protein/32672/Stoichiometry/2.0
component: Glycine--tRNA ligase alpha subunit
component: NADH-quinone oxidoreductase subunit J

tRNA(Met)
type: RnaReference
xref: Reference/ChEBI CHEBI 29173

Reference/PubChem-compound 1061
type: UnificationXref
id: 1061
db: PubChem-compound

Reference/ChEBI CHEBI 17895
type: UnificationXref
id: CHEBI:17895
db: ChEBI

ReactionCoupledTransport6149
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C000500 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001104 Inner Membrane/Stoichiometry/1.0
right: Phosphate
right: L-Glutamine
right: Adenosine diphosphate
right: Hydrogen Ion
spontaneous: false
left: Water
left: Adenosine triphosphate
left: L-Glutamine
name: Adenosine triphosphate + L-Glutamine + Water → Adenosine diphosphate + Hydrogen Ion + L-Glutamine + Phosphate
conversion direction: LEFT_TO_RIGHT

Compound/PW C001420 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

RNA/19/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Phe)
stoichiometric coefficient: 1.0

Reference/UniProt D0SK30
type: UnificationXref
id: D0SK30
db: UniProt

Reference/HMDB HMDB0000883
type: UnificationXref
id: HMDB0000883
db: HMDB

Reference/HMDB HMDB0000641
type: UnificationXref
id: HMDB0000641
db: HMDB

RNA/32/Stoichiometry/1.0
type: Stoichiometry
physical entity: tRNA(Ser)
stoichiometric coefficient: 1.0

glutamate / aspartate ABC transporter
type: Complex
cellular location: Inner Membrane
component: D-methionine transport system permease protein MetI
component: Sulfatase-modifying factor enzyme domain-containing protein
component: ABC transporter, ATP-binding protein
component: ABC transporter, permease protein