Reference/ChEBI CHEBI 16015
type: UnificationXref
id: CHEBI:16015
db: ChEBI

Reference/ChemSpider 30572
type: UnificationXref
id: 30572
db: ChemSpider

Reference/PubChem-compound 6140
type: UnificationXref
id: 6140
db: PubChem-compound

Phenylalanine Biosynthesis
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway443737
pathway component: SubPathwayInteraction443737
xref: Reference/PathWhiz PW000807
xref: Reference/SMPDB SMP0000827
name: SubPathway

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Reference/ChemSpider 1001
type: UnificationXref
id: 1001
db: ChemSpider

Reference/ChEBI CHEBI 16134
type: UnificationXref
id: CHEBI:16134
db: ChEBI

Reference/HMDB HMDB0012199
type: UnificationXref
id: HMDB0012199
db: HMDB

Reference/CAS 63-91-2
type: UnificationXref
id: 63-91-2
db: CAS

Compound/PW C001065/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxygen
stoichiometric coefficient: 1.0

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

Ammonia
type: SmallMoleculeReference
xref: Reference/BioCyc AMMONIA
xref: Reference/CAS 7664-41-7
xref: Reference/HMDB HMDB0000051
xref: Reference/PubChem-compound 222
xref: Reference/KEGG Compound C00014
xref: Reference/ChEBI CHEBI 16134
xref: Reference/ChemSpider 217
chemical formula: H3N
molecular weight: 17.026548
structure: ChemicalStructure/PW C000035

Reference/PubChem-compound 6919011
type: UnificationXref
id: 6919011
db: PubChem-compound

Protein/42268/Stoichiometry/2.0
type: Stoichiometry
physical entity: Aminotransferase
stoichiometric coefficient: 2.0

Reference/ChemSpider 50
type: UnificationXref
id: 50
db: ChemSpider

Compound/PW C040034/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Lysine exporter LysO family protein
type: Protein
entity reference: Lysine exporter LysO family protein

Reference/TAXONOMY 742817
type: UnificationXref
id: 742817
db: TAXONOMY

Unknown
type: Protein
entity reference: Unknown

Compound/PW C042923 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: D-phenylalanine
stoichiometric coefficient: 1.0

Reference/KEGG Compound C02505
type: UnificationXref
id: C02505
db: KEGG Compound

Chorismate Biosynthesis
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway443738
pathway component: SubPathwayInteraction443738
xref: Reference/SMPDB SMP0000836
xref: Reference/PathWhiz PW000816
name: SubPathway

Aminotransferase
type: ProteinReference
xref: Reference/UniProt H1DJ33

D-phenylalanine
type: SmallMolecule
entity reference: D-phenylalanine

D-phenylalanine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: D-phenylalanine

Compound/PW C000095/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Glutamic acid
stoichiometric coefficient: 1.0

Protein/47480/Stoichiometry/6.0
type: Stoichiometry
physical entity: branched-chain-amino-acid transaminase
stoichiometric coefficient: 6.0

Compound/PW C007748/Stoichiometry/1.0
type: Stoichiometry
physical entity: Chorismate
stoichiometric coefficient: 1.0

Reference/PubChem-compound 51
type: UnificationXref
id: 51
db: PubChem-compound

Compound/PW C042923 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: D-phenylalanine
stoichiometric coefficient: 1.0

Compound/PW C000035/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ammonia
stoichiometric coefficient: 1.0

D-phenylalanine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 6919011
chemical formula: C9H11NO2
molecular weight: 165.07898
structure: ChemicalStructure/PW C042923

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Reference/ChemSpider 952
type: UnificationXref
id: 952
db: ChemSpider

ChemicalStructure/PW C007748
type: ChemicalStructure
structure format: SMILES

Reference/GENE ONTOLOGY GO 0005829
type: UnificationXref
id: GO:0005829
db: GENE ONTOLOGY

Ammonia
type: SmallMolecule
entity reference: Ammonia

Reference/ChemSpider 274
type: UnificationXref
id: 274
db: ChemSpider

Oxoglutaric acid
type: SmallMoleculeReference
xref: Reference/CAS 328-50-7
xref: Reference/PubChem-compound 51
xref: Reference/BioCyc 2-KETOGLUTARATE
xref: Reference/HMDB HMDB0000208
xref: Reference/ChEBI CHEBI 30915
xref: Reference/KEGG Compound C00026
xref: Reference/ChemSpider 50
chemical formula: C5H6O5
molecular weight: 146.02153
structure: ChemicalStructure/PW C000134

Phenylpyruvic acid
type: SmallMoleculeReference
xref: Reference/CAS 156-06-9
xref: Reference/ChEBI CHEBI 30851
xref: Reference/ChemSpider 972
xref: Reference/BioCyc PHENYL-PYRUVATE
xref: Reference/PubChem-compound 997
xref: Reference/HMDB HMDB0000205
xref: Reference/KEGG Compound C00166
chemical formula: C9H8O3
molecular weight: 164.04735
structure: ChemicalStructure/PW C000131

Reference/UniProt H1DI19
type: UnificationXref
id: H1DI19
db: UniProt

Aminotransferase
type: Protein
entity reference: Aminotransferase

Compound/PW C000104/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanine
stoichiometric coefficient: 1.0

Reference/UniProt H1DJ33
type: UnificationXref
id: H1DJ33
db: UniProt

Reference/UniProt H1DJ34
type: UnificationXref
id: H1DJ34
db: UniProt

D-phenylalanine
type: SmallMolecule
cellular location: Cytosol
entity reference: D-phenylalanine

Reference/ChEBI CHEBI 17333
type: UnificationXref
id: CHEBI:17333
db: ChEBI

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Reference/PubChem-compound 1028
type: UnificationXref
id: 1028
db: PubChem-compound

Reference/HMDB HMDB0000205
type: UnificationXref
id: HMDB0000205
db: HMDB

Reference/UniProt H1DIA3
type: UnificationXref
id: H1DIA3
db: UniProt

Compound/PW C006723/Stoichiometry/1.0
type: Stoichiometry
physical entity: 2-Phenylacetamide
stoichiometric coefficient: 1.0

Hydrogen Ion
type: SmallMolecule
entity reference: Hydrogen Ion

Reference/HMDB HMDB0000208
type: UnificationXref
id: HMDB0000208
db: HMDB

Cytosol
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005829

Reference/BioCyc CPD-6641
type: UnificationXref
id: CPD-6641
db: BioCyc

Reference/ChemSpider 217
type: UnificationXref
id: 217
db: ChemSpider

Phenylalanine Metabolism
type: Pathway
pathway order: PathwayEnzymeReaction/6145595
pathway order: PathwayTransport/6145601
pathway order: PathwayEnzymeReaction/6145592
pathway order: PathwayEnzymeReaction/6145593
pathway order: PathwayTransport/6145603
pathway order: PathwayEnzymeReaction/6145591
pathway order: PathwayTransport/6145599
pathway order: PathwayEnzymeReaction/6145598
pathway order: PathwaySubPathway/443737
pathway order: PathwayEnzymeReaction/6145596
pathway order: PathwayEnzymeReaction/6145597
pathway order: PathwaySubPathway/443738
pathway component: TransportCatalysis47784
pathway component: Phenylalanine Biosynthesis
pathway component: ReactionCatalysis919222
pathway component: Chorismate Biosynthesis
pathway component: ReactionCatalysis919223
pathway component: ReactionCatalysis668134
pathway component: ReactionCatalysis919224
pathway component: ReactionCatalysis668133
pathway component: ReactionCatalysis668132
pathway component: ReactionCatalysis668131
pathway component: Transport67225
pathway component: 1.4.99.1
pathway component: TransportCatalysis30292
pathway component: Transport67226
pathway component: 2.6.1.57
pathway component: 1.11.1.21
pathway component: Transport48634
pathway component: TransportCatalysis47785
pathway component: 5.4.99.5
pathway component: Reaction672415
pathway component: 2.6.1.1
xref: Reference/PathWhiz PW435928
xref: Reference/SMPDB SMP0422567
organism: Odoribacter laneus YIT 12061

ChemicalStructure/PW C000131
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)C(=O)CC1=CC=CC=C1

L-Glutamic acid
type: SmallMolecule
entity reference: L-Glutamic acid

Prephenate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 16666
xref: Reference/CAS 126-49-8
xref: Reference/PubChem-compound 1028
xref: Reference/BioCyc PREPHENATE
xref: Reference/KEGG Compound C00254
xref: Reference/HMDB HMDB0012283
xref: Reference/ChemSpider 1001
chemical formula: C10H10O6
molecular weight: 226.04774
structure: ChemicalStructure/PW C007823

Reference/BioCyc PREPHENATE
type: UnificationXref
id: PREPHENATE
db: BioCyc

ChemicalStructure/PW C000134
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)CCC(=O)C(O)=O

Oxygen
type: SmallMolecule
entity reference: Oxygen

TransportCatalysis30292
type: Catalysis
controller: Unknown
controlled: Transport48634
control type: ACTIVATION

Reference/CAS 124-38-9
type: UnificationXref
id: 124-38-9
db: CAS

Reference/ChEBI CHEBI 30915
type: UnificationXref
id: CHEBI:30915
db: ChEBI

Reference/UniProt H1DJ18
type: UnificationXref
id: H1DJ18
db: UniProt

branched-chain-amino-acid transaminase
type: ProteinReference
xref: Reference/UniProt H1DIA3

Reference/KEGG Compound C00007
type: UnificationXref
id: C00007
db: KEGG Compound

Hydrogen Ion
type: SmallMolecule
cellular location: Cytosol
entity reference: Hydrogen Ion

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Uncharacterized protein
type: Protein
entity reference: Uncharacterized protein

EamA domain-containing protein
type: Protein
entity reference: EamA domain-containing protein

GLPGLI family protein
type: Protein
entity reference: GLPGLI family protein

Reference/BioCyc PHENYL-PYRUVATE
type: UnificationXref
id: PHENYL-PYRUVATE
db: BioCyc

Aminotransferase class I/classII large domain-containing protein
type: ProteinReference
xref: Reference/UniProt H1DJ18

prephenate dehydratase
type: ProteinReference
xref: Reference/UniProt H1DJ34

Reference/BioCyc GLT
type: UnificationXref
id: GLT
db: BioCyc

Reference/CAS 7664-41-7
type: UnificationXref
id: 7664-41-7
db: CAS

Protein/29022/Stoichiometry/1.0
type: Stoichiometry
physical entity: Unknown
stoichiometric coefficient: 1.0

Lysine exporter LysO family protein
type: ProteinReference
xref: Reference/UniProt H1DCZ7

Unknown
type: ProteinReference

5.4.99.5
type: BiochemicalReaction
participant stoichiometry: Compound/PW C007748/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007823/Stoichiometry/1.0
right: Prephenate
spontaneous: false
EC number: 5.4.99.5
left: Chorismate
name: Chorismate → Prephenate
conversion direction: LEFT_TO_RIGHT

Reaction672415
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001420/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001316/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000131/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007823/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034/Stoichiometry/1.0
right: Water
right: Phenylpyruvic acid
right: Carbon dioxide
spontaneous: false
left: Prephenate
left: Hydrogen Ion
name: Hydrogen Ion + Prephenate → Carbon dioxide + Phenylpyruvic acid + Water
conversion direction: LEFT_TO_RIGHT

2.6.1.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000095/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000131/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000104/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000134/Stoichiometry/1.0
right: Oxoglutaric acid
right: L-Phenylalanine
spontaneous: false
EC number: 2.6.1.1
left: L-Glutamic acid
left: Phenylpyruvic acid
name: L-Glutamic acid + Phenylpyruvic acid → L-Phenylalanine + Oxoglutaric acid
conversion direction: LEFT_TO_RIGHT

Protein/37151/Stoichiometry/2.0
type: Stoichiometry
physical entity: Uncharacterized protein
stoichiometric coefficient: 2.0

Compound/PW C040034 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00254
type: UnificationXref
id: C00254
db: KEGG Compound

ReactionCatalysis668134
type: Catalysis
controller: phenylalanine transaminase:aspC
controlled: 2.6.1.1
control type: ACTIVATION

Reference/KEGG Compound C00011
type: UnificationXref
id: C00011
db: KEGG Compound

ChemicalStructure/PW C001316
type: ChemicalStructure
structure format: SMILES
structure data: O=C=O

ReactionCatalysis668133
type: Catalysis
controller: phenylalanine transaminase:ilvE
controlled: 2.6.1.1
control type: ACTIVATION

Reference/SMPDB SMP0422567
type: UnificationXref
id: SMP0422567
db: SMPDB

ReactionCatalysis668132
type: Catalysis
controller: chorismate mutase:pheA
controlled: Reaction672415
control type: ACTIVATION

ReactionCatalysis668131
type: Catalysis
controller: chorismate mutase:pheA
controlled: 5.4.99.5
control type: ACTIVATION

Reference/KEGG Compound C00251
type: UnificationXref
id: C00251
db: KEGG Compound

ChemicalStructure/PW C000104
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC1=CC=CC=C1)C(O)=O

D-amino acid dehydrogenase
type: Complex
component stoichiometry: Protein/37151/Stoichiometry/2.0
component: Uncharacterized protein

Reference/PubChem-compound 222
type: UnificationXref
id: 222
db: PubChem-compound

Reference/KEGG Compound C00014
type: UnificationXref
id: C00014
db: KEGG Compound

Prephenate
type: SmallMolecule
entity reference: Prephenate

Reference/UniProt H1DK16
type: UnificationXref
id: H1DK16
db: UniProt

Reference/GENE ONTOLOGY GO 0005620
type: UnificationXref
id: GO:0005620
db: GENE ONTOLOGY

Protein/47474/Stoichiometry/2.0
type: Stoichiometry
physical entity: Aminotransferase class I/classII large domain-containing protein
stoichiometric coefficient: 2.0

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

phenylalanine aminotransferase
type: Complex
component stoichiometry: Protein/47474/Stoichiometry/2.0
component: Aminotransferase class I/classII large domain-containing protein

Reference/PubChem-compound 7680
type: UnificationXref
id: 7680
db: PubChem-compound

Catalase Peroxidase
type: Complex
component stoichiometry: Protein/70536/Stoichiometry/4.0
component: GLPGLI family protein

Reference/KEGG Compound C00026
type: UnificationXref
id: C00026
db: KEGG Compound

Reference/KEGG Compound C00025
type: UnificationXref
id: C00025
db: KEGG Compound

Reference/ChemSpider 7397
type: UnificationXref
id: 7397
db: ChemSpider

2-Phenylacetamide
type: SmallMolecule
entity reference: 2-Phenylacetamide

2-Phenylacetamide
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0010715
xref: Reference/CAS 103-81-1
xref: Reference/PubChem-compound 7680
xref: Reference/KEGG Compound C02505
xref: Reference/ChEBI CHEBI 16562
xref: Reference/ChemSpider 7397
chemical formula: C8H9NO
molecular weight: 135.06842
structure: ChemicalStructure/PW C006723

Reference/HMDB HMDB0010715
type: UnificationXref
id: HMDB0010715
db: HMDB

ChemicalStructure/PW C042923
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CC1=CC=CC=C1)C(O)=O

Reference/CAS 328-50-7
type: UnificationXref
id: 328-50-7
db: CAS

Water
type: SmallMolecule
entity reference: Water

Transport67225
type: Transport
participant stoichiometry: Compound/PW C042923 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C042923 Periplasmic Space/Stoichiometry/1.0
right: D-phenylalanine
spontaneous: false
left: D-phenylalanine
name: D-phenylalanine (→) Transport: Odoribacter laneus YIT 12061, Cytosol to Odoribacter laneus YIT 12061, Periplasmic Space
conversion direction: LEFT_TO_RIGHT

Transport67226
type: Transport
participant stoichiometry: Compound/PW C000104 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000104 Cytosol/Stoichiometry/1.0
right: L-Phenylalanine
spontaneous: false
left: L-Phenylalanine
name: L-Phenylalanine (→) Transport: Odoribacter laneus YIT 12061, Cytosol to Odoribacter laneus YIT 12061, Periplasmic Space
conversion direction: LEFT_TO_RIGHT

Reference/ChEBI CHEBI 16666
type: UnificationXref
id: CHEBI:16666
db: ChEBI

Reference/PubChem-compound 997
type: UnificationXref
id: 997
db: PubChem-compound

Protein/70536/Stoichiometry/4.0
type: Stoichiometry
physical entity: GLPGLI family protein
stoichiometric coefficient: 4.0

Reference/KEGG Compound C00166
type: UnificationXref
id: C00166
db: KEGG Compound

L-Phenylalanine
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: L-Phenylalanine

Chorismate
type: SmallMoleculeReference
xref: Reference/CAS 617-12-9
xref: Reference/BioCyc CPD-9517
xref: Reference/KEGG Compound C00251
xref: Reference/PubChem-compound 12039
xref: Reference/ChEBI CHEBI 17333
xref: Reference/ChemSpider 11542
xref: Reference/HMDB HMDB0012199
chemical formula: C10H10O6
molecular weight: 226.04774
structure: ChemicalStructure/PW C007748

ChemicalStructure/PW C006723
type: ChemicalStructure
structure format: SMILES
structure data: NC(=O)CC1=CC=CC=C1

Reference/HMDB HMDB0000148
type: UnificationXref
id: HMDB0000148
db: HMDB

Compound/PW C007823/Stoichiometry/1.0
type: Stoichiometry
physical entity: Prephenate
stoichiometric coefficient: 1.0

1.4.99.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C042923/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000131/Stoichiometry/1.0
participant stoichiometry: Protein/29022/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000035/Stoichiometry/1.0
right: Water
right: Unknown
right: D-phenylalanine
spontaneous: false
EC number: 1.4.99.1
left: Ammonia
left: Unknown
left: Phenylpyruvic acid
name: Ammonia + Phenylpyruvic acid + cytochrome c nitrite reductase ↔ D-phenylalanine + Water + cytochrome c nitrite reductase
conversion direction: REVERSIBLE

2.6.1.57
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000104/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000131/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001065/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000134/Stoichiometry/1.0
right: Oxoglutaric acid
right: Phenylpyruvic acid
spontaneous: false
EC number: 2.6.1.57
left: Oxygen
left: L-Phenylalanine
name: L-Phenylalanine + Oxygen ↔ Oxoglutaric acid + Phenylpyruvic acid
conversion direction: REVERSIBLE

1.11.1.21
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000104/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001316/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001065/Stoichiometry/1.0
participant stoichiometry: Compound/PW C006723/Stoichiometry/1.0
right: 2-Phenylacetamide
right: Carbon dioxide
spontaneous: false
EC number: 1.11.1.21
left: Oxygen
left: L-Phenylalanine
name: L-Phenylalanine + Oxygen ↔ 2-Phenylacetamide + Carbon dioxide
conversion direction: REVERSIBLE

Reference/ChemSpider 11542
type: UnificationXref
id: 11542
db: ChemSpider

L-Phenylalanine
type: SmallMolecule
cellular location: Cytosol
entity reference: L-Phenylalanine

TransportCatalysis47784
type: Catalysis
controller: EamA domain-containing protein
controlled: Transport67225
control type: ACTIVATION

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

Reference/SMPDB SMP0000827
type: UnificationXref
id: SMP0000827
db: SMPDB

Chorismate
type: SmallMolecule
entity reference: Chorismate
name: SubPathwayOutput

Reference/CAS 617-12-9
type: UnificationXref
id: 617-12-9
db: CAS

Oxygen
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001377
xref: Reference/ChemSpider 952
xref: Reference/KEGG Compound C00007
xref: Reference/ChEBI CHEBI 15379
xref: Reference/PubChem-compound 977
xref: Reference/BioCyc CPD-6641
xref: Reference/CAS 7782-44-7
chemical formula: O2
molecular weight: 31.98983
structure: ChemicalStructure/PW C001065

Compound/PW C001316/Stoichiometry/1.0
type: Stoichiometry
physical entity: Carbon dioxide
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0000159
type: UnificationXref
id: HMDB0000159
db: HMDB

Reference/BioCyc AMMONIA
type: UnificationXref
id: AMMONIA
db: BioCyc

ChemicalStructure/PW C000035
type: ChemicalStructure
structure format: SMILES
structure data: N

Reference/CAS 56-86-0
type: UnificationXref
id: 56-86-0
db: CAS

L-Glutamic acid
type: SmallMoleculeReference
xref: Reference/PubChem-compound 33032
xref: Reference/ChEBI CHEBI 16015
xref: Reference/ChemSpider 30572
xref: Reference/HMDB HMDB0000148
xref: Reference/CAS 56-86-0
xref: Reference/BioCyc GLT
xref: Reference/KEGG Compound C00025
chemical formula: C5H9NO4
molecular weight: 147.05316
structure: ChemicalStructure/PW C000095

Reference/CAS 156-06-9
type: UnificationXref
id: 156-06-9
db: CAS

Reference/PubChem-compound 33032
type: UnificationXref
id: 33032
db: PubChem-compound

Reference/SMPDB SMP0000836
type: UnificationXref
id: SMP0000836
db: SMPDB

Reference/ChEBI CHEBI 16526
type: UnificationXref
id: CHEBI:16526
db: ChEBI

Reference/ChEBI CHEBI 17295
type: UnificationXref
id: CHEBI:17295
db: ChEBI

Compound/PW C000134/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxoglutaric acid
stoichiometric coefficient: 1.0

Reference/UniProt H1DG52
type: UnificationXref
id: H1DG52
db: UniProt

Reference/CAS 7782-44-7
type: UnificationXref
id: 7782-44-7
db: CAS

Reference/HMDB HMDB0001377
type: UnificationXref
id: HMDB0001377
db: HMDB

Odoribacter laneus YIT 12061
type: BioSource
xref: Reference/TAXONOMY 742817

Reference/BioCyc PHE
type: UnificationXref
id: PHE
db: BioCyc

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

Reference/BioCyc CPD-9517
type: UnificationXref
id: CPD-9517
db: BioCyc

Reference/CAS 103-81-1
type: UnificationXref
id: 103-81-1
db: CAS

L-Phenylalanine
type: SmallMoleculeReference
xref: Reference/PubChem-compound 6140
xref: Reference/HMDB HMDB0000159
xref: Reference/ChemSpider 5910
xref: Reference/ChEBI CHEBI 17295
xref: Reference/BioCyc PHE
xref: Reference/CAS 63-91-2
xref: Reference/KEGG Compound C00079
chemical formula: C9H11NO2
molecular weight: 165.07898
structure: ChemicalStructure/PW C000104

Reference/BioCyc 2-KETOGLUTARATE
type: UnificationXref
id: 2-KETOGLUTARATE
db: BioCyc

Carbon dioxide
type: SmallMoleculeReference
xref: Reference/PubChem-compound 280
xref: Reference/ChEBI CHEBI 16526
xref: Reference/ChemSpider 274
xref: Reference/HMDB HMDB0001967
xref: Reference/CAS 124-38-9
xref: Reference/KEGG Compound C00011
chemical formula: CO2
molecular weight: 43.98983
structure: ChemicalStructure/PW C001316

Reference/KEGG Compound C00079
type: UnificationXref
id: C00079
db: KEGG Compound

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Compound/PW C042923/Stoichiometry/1.0
type: Stoichiometry
physical entity: D-phenylalanine
stoichiometric coefficient: 1.0

Reference/ChemSpider 972
type: UnificationXref
id: 972
db: ChemSpider

ChemicalStructure/PW C001065
type: ChemicalStructure
structure format: SMILES
structure data: O=O

SubPathwayInteraction443738
type: Interaction
name: SubPathwayReaction
name: SubPathway443738Reaction
participant: Chorismate

Periplasmic Space
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005620

SubPathwayInteraction443737
type: Interaction
name: SubPathwayReaction
name: SubPathway443737Reaction
participant: L-Phenylalanine

Reference/CAS 126-49-8
type: UnificationXref
id: 126-49-8
db: CAS

Oxoglutaric acid
type: SmallMolecule
entity reference: Oxoglutaric acid

Phenylpyruvic acid
type: SmallMolecule
entity reference: Phenylpyruvic acid

Reference/HMDB HMDB0000051
type: UnificationXref
id: HMDB0000051
db: HMDB

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

ChemicalStructure/PW C000095
type: ChemicalStructure
structure format: SMILES
structure data: N[C@@H](CCC(O)=O)C(O)=O

Reference/PathWhiz PW000816
type: UnificationXref
id: PW000816
db: PathWhiz

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 15379
type: UnificationXref
id: CHEBI:15379
db: ChEBI

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Compound/PW C000104 Cytosol/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanine
stoichiometric coefficient: 1.0

Reference/ChemSpider 5910
type: UnificationXref
id: 5910
db: ChemSpider

Uncharacterized protein
type: ProteinReference
xref: Reference/UniProt H1DG52

Reference/HMDB HMDB0012283
type: UnificationXref
id: HMDB0012283
db: HMDB

Compound/PW C001420/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

Reference/PathWhiz PW000807
type: UnificationXref
id: PW000807
db: PathWhiz

Reference/PubChem-compound 280
type: UnificationXref
id: 280
db: PubChem-compound

TransportCatalysis47785
type: Catalysis
controller: Lysine exporter LysO family protein
controlled: Transport67226
control type: ACTIVATION

phenylalanine transaminase:aspC
type: Complex
component stoichiometry: Protein/42268/Stoichiometry/2.0
component: Aminotransferase

Compound/PW C000104 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-Phenylalanine
stoichiometric coefficient: 1.0

branched-chain-amino-acid transaminase
type: Protein
entity reference: branched-chain-amino-acid transaminase

ReactionCatalysis919222
type: Catalysis
controller: phenylalanine aminotransferase
controlled: 2.6.1.57
control type: ACTIVATION

ReactionCatalysis919223
type: Catalysis
controller: Catalase Peroxidase
controlled: 1.11.1.21
control type: ACTIVATION

ReactionCatalysis919224
type: Catalysis
controller: D-amino acid dehydrogenase
controlled: 1.4.99.1
control type: ACTIVATION

chorismate mutase:pheA
type: Complex
component stoichiometry: Protein/47479/Stoichiometry/2.0
component: prephenate dehydratase

phenylalanine transaminase:ilvE
type: Complex
component stoichiometry: Protein/47480/Stoichiometry/6.0
component: branched-chain-amino-acid transaminase

Reference/ChEBI CHEBI 30851
type: UnificationXref
id: CHEBI:30851
db: ChEBI

ChemicalStructure/PW C007823
type: ChemicalStructure
structure format: SMILES

Compound/PW C000131/Stoichiometry/1.0
type: Stoichiometry
physical entity: Phenylpyruvic acid
stoichiometric coefficient: 1.0

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

EamA domain-containing protein
type: ProteinReference
xref: Reference/UniProt H1DI19

Reference/PathWhiz PW435928
type: UnificationXref
id: PW435928
db: PathWhiz

Aminotransferase class I/classII large domain-containing protein
type: Protein
entity reference: Aminotransferase class I/classII large domain-containing protein

GLPGLI family protein
type: ProteinReference
xref: Reference/UniProt H1DK16

prephenate dehydratase
type: Protein
entity reference: prephenate dehydratase

Reference/PubChem-compound 977
type: UnificationXref
id: 977
db: PubChem-compound

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

Hydrogen Ion
type: SmallMolecule
cellular location: Periplasmic Space
entity reference: Hydrogen Ion

Carbon dioxide
type: SmallMolecule
entity reference: Carbon dioxide

Reference/HMDB HMDB0001967
type: UnificationXref
id: HMDB0001967
db: HMDB

L-Phenylalanine
type: SmallMolecule
entity reference: L-Phenylalanine
name: SubPathwayInput

Reference/UniProt H1DCZ7
type: UnificationXref
id: H1DCZ7
db: UniProt

Reference/PubChem-compound 12039
type: UnificationXref
id: 12039
db: PubChem-compound

Reference/ChEBI CHEBI 16562
type: UnificationXref
id: CHEBI:16562
db: ChEBI

Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Protein/47479/Stoichiometry/2.0
type: Stoichiometry
physical entity: prephenate dehydratase
stoichiometric coefficient: 2.0

Transport48634
type: Transport
participant stoichiometry: Compound/PW C000104 Periplasmic Space/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000104 Cytosol/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Periplasmic Space/Stoichiometry/1.0
right: L-Phenylalanine
right: Hydrogen Ion
spontaneous: false
left: Hydrogen Ion
left: L-Phenylalanine
name: L-Phenylalanine (→), Hydrogen Ion (→) Transport: Odoribacter laneus YIT 12061, Periplasmic Space to Odoribacter laneus YIT 12061, Cytosol
conversion direction: LEFT_TO_RIGHT