Reference/UniProt D4DPM3
type: UnificationXref
id: D4DPM3
db: UniProt

Reference/UniProt D4DPM5
type: UnificationXref
id: D4DPM5
db: UniProt

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

ReactionCoupledTransportCatalysis18808
type: Catalysis
controller: cytochrome bd-II terminal oxidase
controlled: 1.10.3.10
control type: ACTIVATION

ReactionCoupledTransportCatalysis18806
type: Catalysis
controller: cytochrome bd-I terminal oxidase
controlled: 1.10.3.14
control type: ACTIVATION

Succinic acid
type: SmallMolecule
entity reference: Succinic acid

Reference/PubChem-compound 439153
type: UnificationXref
id: 439153
db: PubChem-compound

Reference/CAS 110-17-8
type: UnificationXref
id: 110-17-8
db: CAS

Reference/PubChem-compound 21883788
type: UnificationXref
id: 21883788
db: PubChem-compound

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

NADH-quinone oxidoreductase subunit K
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit K

Porphyrin Metabolism
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway445558
pathway component: SubPathwayInteraction445558
xref: Reference/SMPDB SMP0000953
xref: Reference/PathWhiz PW000936
name: SubPathway

Reference/UniProt D4DPM0
type: UnificationXref
id: D4DPM0
db: UniProt

Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Ubiquinone-1
stoichiometric coefficient: 2.0

Reference/UniProt D4DPM2
type: UnificationXref
id: D4DPM2
db: UniProt

SubPathwayInteraction445558
type: Interaction
name: SubPathway445558Reaction
name: SubPathwayReaction

Reference/ChEBI CHEBI 16389
type: UnificationXref
id: CHEBI:16389
db: ChEBI

NADH:ubiquinone oxidoreductase I
type: Complex
cellular location: Inner Membrane
component: NADH-quinone oxidoreductase subunit B
component: NADH dehydrogenase
component: NADH-quinone oxidoreductase subunit J
component: NADH-quinone oxidoreductase subunit N
component: NADH-quinone oxidoreductase subunit I
component: NADH-quinone oxidoreductase subunit H
component: NADH-quinone oxidoreductase subunit A
component: NADH dehydrogenase subunit M
component: NADH-quinone oxidoreductase
component: NADH-quinone oxidoreductase subunit D
component: NADH-quinone oxidoreductase subunit K
component: NADH-quinone oxidoreductase subunit F
component: NADH dehydrogenase subunit L

Reference/UniProt D4DMH9
type: UnificationXref
id: D4DMH9
db: UniProt

L-aspartate oxidase
type: ProteinReference
xref: Reference/UniProt D4DN33

Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxygen
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15846
type: UnificationXref
id: CHEBI:15846
db: ChEBI

NADH dehydrogenase subunit M
type: ProteinReference
xref: Reference/UniProt D4DSW8
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Reference/ChemSpider 952
type: UnificationXref
id: 952
db: ChemSpider

cytochrome bo terminal oxidase
type: Complex
cellular location: Inner Membrane
component: Transporter
component: Aldehyde dehydrogenase
component: Membrane protein
component: Thiol:disulfide interchange protein DsbD

Compound/PW C001347 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinone-1
stoichiometric coefficient: 1.0

L-aspartate oxidase
type: Protein
entity reference: L-aspartate oxidase

Reference/ChEBI CHEBI 16908
type: UnificationXref
id: CHEBI:16908
db: ChEBI

NAD
type: SmallMolecule
cellular location: Inner Membrane
entity reference: NAD

Reference/UniProt D4DPL9
type: UnificationXref
id: D4DPL9
db: UniProt

NADH-quinone oxidoreductase subunit I
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit I

Ubiquinone-1
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 16389
xref: Reference/ChemSpider 4307
xref: Reference/PubChem-compound 4462
xref: Reference/CAS 727-81-1
xref: Reference/HMDB HMDB0002012
xref: Reference/KEGG Compound C00399
chemical formula: C14H18O4
molecular weight: 250.12051
structure: ChemicalStructure/PW C001347

Ubiquinol-1
type: SmallMolecule
entity reference: Ubiquinol-1

NADH-quinone oxidoreductase subunit A
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit A

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Neisseria elongata subsp. glycolytica ATCC 29315
type: BioSource
xref: Reference/TAXONOMY 546263

Reference/GENE ONTOLOGY GO 0070258
type: UnificationXref
id: GO:0070258
db: GENE ONTOLOGY

Thiol:disulfide interchange protein DsbD
type: Protein
cellular location: Inner Membrane
entity reference: Thiol:disulfide interchange protein DsbD

Cadmium, cobalt and zinc/H(+)-K(+) antiporter
type: Protein
cellular location: Inner Membrane
entity reference: Cadmium, cobalt and zinc/H(+)-K(+) antiporter

Oxygen
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Oxygen

Aldehyde dehydrogenase
type: ProteinReference
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Aldehyde dehydrogenase
type: Protein
cellular location: Inner Membrane
entity reference: Aldehyde dehydrogenase

Ubiquinone-1
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Ubiquinone-1

NADH-quinone oxidoreductase subunit H
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit H

Reference/BioCyc CPD-6641
type: UnificationXref
id: CPD-6641
db: BioCyc

NADH dehydrogenase subunit M
type: Protein
cellular location: Inner Membrane
entity reference: NADH dehydrogenase subunit M

Reference/UniProt D4DQC6
type: UnificationXref
id: D4DQC6
db: UniProt

Reference/BioCyc SUC
type: UnificationXref
id: SUC
db: BioCyc

Reference/CAS 58-68-4
type: UnificationXref
id: 58-68-4
db: CAS

NADH-quinone oxidoreductase subunit F
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit F

Hydrogen Ion
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Hydrogen Ion

Reference/UniProt D4DSW7
type: UnificationXref
id: D4DSW7
db: UniProt

NADH
type: SmallMolecule
cellular location: Inner Membrane
entity reference: NADH

Reference/UniProt D4DSW8
type: UnificationXref
id: D4DSW8
db: UniProt

Reference/ChemSpider 4307
type: UnificationXref
id: 4307
db: ChemSpider

Reference/KEGG Compound C00007
type: UnificationXref
id: C00007
db: KEGG Compound

Reference/KEGG Compound C00122
type: UnificationXref
id: C00122
db: KEGG Compound

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Reference/UniProt D4DQD2
type: UnificationXref
id: D4DQD2
db: UniProt

Reference/TAXONOMY 546263
type: UnificationXref
id: 546263
db: TAXONOMY

ChemicalStructure/PW C001347
type: ChemicalStructure
structure format: SMILES
structure data: COC1=C(OC)C(=O)C(CC=C(C)C)=C(C)C1=O

Oxidative Phosphorylation
type: Pathway
pathway order: PathwayEnzymeReaction/6165833
pathway order: PathwayEnzymeReaction/6165839
pathway order: PathwaySubPathway/445558
pathway order: PathwayEnzymeReaction/6165843
pathway order: PathwayEnzymeReaction/6165842
pathway order: PathwayEnzymeReaction/6165841
pathway component: ReactionCoupledTransportCatalysis18810
pathway component: Reaction914586
pathway component: ReactionCatalysis926145
pathway component: ReactionCoupledTransportCatalysis18809
pathway component: 1.6.99.5
pathway component: 1.10.3.10
pathway component: ReactionCoupledTransportCatalysis18808
pathway component: ReactionCoupledTransport18747
pathway component: 1.10.3.14
pathway component: Porphyrin Metabolism
pathway component: ReactionCoupledTransportCatalysis18806
xref: Reference/PathWhiz PW437413
xref: Reference/SMPDB SMP0423884
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Reference/SMPDB SMP0423884
type: UnificationXref
id: SMP0423884
db: SMPDB

Reference/KEGG Compound C00004
type: UnificationXref
id: C00004
db: KEGG Compound

Inner Membrane
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0070258

Reference/KEGG Compound C00003
type: UnificationXref
id: C00003
db: KEGG Compound

Compound/PW C040034 Inner Membrane/Stoichiometry/5.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 5.0

Reference/UniProt D4DSX0
type: UnificationXref
id: D4DSX0
db: UniProt

Fumaric acid
type: SmallMolecule
entity reference: Fumaric acid

Reference/UniProt D4DSX1
type: UnificationXref
id: D4DSX1
db: UniProt

Reference/UniProt D4DSX2
type: UnificationXref
id: D4DSX2
db: UniProt

Reference/UniProt D4DSX3
type: UnificationXref
id: D4DSX3
db: UniProt

Fumaric acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000134
xref: Reference/ChemSpider 10197150
xref: Reference/CAS 110-17-8
xref: Reference/PubChem-compound 21883788
xref: Reference/KEGG Compound C00122
xref: Reference/BioCyc FUM
xref: Reference/ChEBI CHEBI 18012
chemical formula: C4H4O4
molecular weight: 116.010956
structure: ChemicalStructure/PW C000088

Transporter, SSS family
type: Protein
cellular location: Inner Membrane
entity reference: Transporter, SSS family

Reference/ChEBI CHEBI 15741
type: UnificationXref
id: CHEBI:15741
db: ChEBI

NADH-quinone oxidoreductase subunit N
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit N

NAD
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15846
xref: Reference/HMDB HMDB0000902
xref: Reference/CAS 53-84-9
xref: Reference/KEGG Compound C00003
xref: Reference/PubChem-compound 5893
xref: Reference/BioCyc NAD
xref: Reference/ChemSpider 5682
chemical formula: C21H27N7O14P2
molecular weight: 663.10913
structure: ChemicalStructure/PW C000721

Reference/PubChem-compound 447920
type: UnificationXref
id: 447920
db: PubChem-compound

Reference/HMDB HMDB0000902
type: UnificationXref
id: HMDB0000902
db: HMDB

Reference/PubChem-compound 1110
type: UnificationXref
id: 1110
db: PubChem-compound

NADH
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001487
xref: Reference/CAS 58-68-4
xref: Reference/PubChem-compound 439153
xref: Reference/BioCyc NADH
xref: Reference/ChemSpider 388299
xref: Reference/KEGG Compound C00004
xref: Reference/ChEBI CHEBI 16908
chemical formula: C21H29N7O14P2
molecular weight: 665.12476
structure: ChemicalStructure/PW C001144

NADH-quinone oxidoreductase
type: ProteinReference
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit B
type: ProteinReference
xref: Reference/UniProt D4DPM0
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit D
type: ProteinReference
xref: Reference/UniProt D4DPM2
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Succinic acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000254
xref: Reference/CAS 110-15-6
xref: Reference/ChEBI CHEBI 15741
xref: Reference/KEGG Compound C00042
xref: Reference/ChemSpider 1078
xref: Reference/PubChem-compound 1110
xref: Reference/BioCyc SUC
chemical formula: C4H6O4
molecular weight: 118.02661
structure: ChemicalStructure/PW C000174

NADH-quinone oxidoreductase subunit I
type: ProteinReference
xref: Reference/UniProt D4DSX3
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Ubiquinol-1
stoichiometric coefficient: 2.0

ReactionCatalysis926145
type: Catalysis
controller: succinate:quinone oxidoreductase
controlled: Reaction914586
control type: ACTIVATION

Reference/CAS 53-84-9
type: UnificationXref
id: 53-84-9
db: CAS

Compound/PW C040034 Inner Membrane/Stoichiometry/4.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 4.0

Protein/71874/Stoichiometry/1.0
type: Stoichiometry
physical entity: Succinate dehydrogenase cytochrome b556 subunit
stoichiometric coefficient: 1.0

Compound/PW C042948/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinol-1
stoichiometric coefficient: 1.0

ChemicalStructure/PW C000721
type: ChemicalStructure
structure format: SMILES

Reference/PathWhiz PW437413
type: UnificationXref
id: PW437413
db: PathWhiz

Reference/KEGG Compound C00399
type: UnificationXref
id: C00399
db: KEGG Compound

Reference/ChemSpider 5682
type: UnificationXref
id: 5682
db: ChemSpider

Reference/HMDB HMDB0000134
type: UnificationXref
id: HMDB0000134
db: HMDB

ChemicalStructure/PW C001144
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000254
type: UnificationXref
id: HMDB0000254
db: HMDB

ChemicalStructure/PW C000174
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)CCC(O)=O

Compound/PW C042948 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinol-1
stoichiometric coefficient: 1.0

NADH-quinone oxidoreductase subunit J
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit J

Glutathione peroxidase
type: Protein
cellular location: Inner Membrane
entity reference: Glutathione peroxidase

Reference/KEGG Compound C00042
type: UnificationXref
id: C00042
db: KEGG Compound

Reference/ChemSpider 1078
type: UnificationXref
id: 1078
db: ChemSpider

cytochrome bd-II terminal oxidase
type: Complex
cellular location: Inner Membrane
component: Cadmium, cobalt and zinc/H(+)-K(+) antiporter
component: Transporter, SSS family

Water
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Water

NADH-quinone oxidoreductase subunit B
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit B

Reference/ChemSpider 10197150
type: UnificationXref
id: 10197150
db: ChemSpider

Reaction914586
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001347/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000174/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000088/Stoichiometry/1.0
participant stoichiometry: Compound/PW C042948/Stoichiometry/1.0
right: Fumaric acid
right: Ubiquinol-1
spontaneous: false
left: Succinic acid
left: Ubiquinone-1
name: Succinic acid + Ubiquinone-1 → Fumaric acid + Ubiquinol-1
conversion direction: LEFT_TO_RIGHT

Reference/BioCyc FUM
type: UnificationXref
id: FUM
db: BioCyc

Transporter
type: Protein
cellular location: Inner Membrane
entity reference: Transporter

Succinate dehydrogenase cytochrome b556 subunit
type: Protein
entity reference: Succinate dehydrogenase cytochrome b556 subunit

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

Reference/ChemSpider 388299
type: UnificationXref
id: 388299
db: ChemSpider

Succinate dehydrogenase iron-sulfur subunit
type: Protein
entity reference: Succinate dehydrogenase iron-sulfur subunit

ChemicalStructure/PW C042948
type: ChemicalStructure
structure format: SMILES
structure data: COC1=C(O)C(C)=C(CC=C(C)C)C(O)=C1OC

Reference/ChEBI CHEBI 18012
type: UnificationXref
id: CHEBI:18012
db: ChEBI

Succinate dehydrogenase hydrophobic membrane anchor subunit
type: Protein
entity reference: Succinate dehydrogenase hydrophobic membrane anchor subunit

Integral membrane protein, PqiA family
type: Protein
cellular location: Inner Membrane
entity reference: Integral membrane protein, PqiA family

Reference/HMDB HMDB0001487
type: UnificationXref
id: HMDB0001487
db: HMDB

Oxygen
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001377
xref: Reference/ChemSpider 952
xref: Reference/KEGG Compound C00007
xref: Reference/ChEBI CHEBI 15379
xref: Reference/PubChem-compound 977
xref: Reference/BioCyc CPD-6641
xref: Reference/CAS 7782-44-7
chemical formula: O2
molecular weight: 31.98983
structure: ChemicalStructure/PW C001065

Protein/43474/Stoichiometry/1.0
type: Stoichiometry
physical entity: L-aspartate oxidase
stoichiometric coefficient: 1.0

Reference/SMPDB SMP0000953
type: UnificationXref
id: SMP0000953
db: SMPDB

Compound/PW C001144 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADH
stoichiometric coefficient: 1.0

Protein/71873/Stoichiometry/1.0
type: Stoichiometry
physical entity: Succinate dehydrogenase iron-sulfur subunit
stoichiometric coefficient: 1.0

Reference/UniProt D4DUN6
type: UnificationXref
id: D4DUN6
db: UniProt

Protein/71875/Stoichiometry/1.0
type: Stoichiometry
physical entity: Succinate dehydrogenase hydrophobic membrane anchor subunit
stoichiometric coefficient: 1.0

Membrane protein
type: Protein
cellular location: Inner Membrane
entity reference: Membrane protein

Reference/CAS 7782-44-7
type: UnificationXref
id: 7782-44-7
db: CAS

Reference/HMDB HMDB0001377
type: UnificationXref
id: HMDB0001377
db: HMDB

NADH dehydrogenase subunit L
type: ProteinReference
xref: Reference/UniProt D4DSX0
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit K
type: ProteinReference
xref: Reference/UniProt D4DSX1
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH dehydrogenase
type: ProteinReference
xref: Reference/UniProt D4DPM3
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit N
type: ProteinReference
xref: Reference/UniProt D4DSW7
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit F
type: ProteinReference
xref: Reference/UniProt D4DPM5
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Reference/UniProt D4DP37
type: UnificationXref
id: D4DP37
db: UniProt

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

Compound/PW C001347/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinone-1
stoichiometric coefficient: 1.0

Intein C-terminal splicing region
type: Protein
cellular location: Inner Membrane
entity reference: Intein C-terminal splicing region

succinate:quinone oxidoreductase
type: Complex
component stoichiometry: Protein/43474/Stoichiometry/1.0
component stoichiometry: Protein/71873/Stoichiometry/1.0
component stoichiometry: Protein/71874/Stoichiometry/1.0
component stoichiometry: Protein/71875/Stoichiometry/1.0
component: L-aspartate oxidase
component: Succinate dehydrogenase cytochrome b556 subunit
component: Succinate dehydrogenase iron-sulfur subunit
component: Succinate dehydrogenase hydrophobic membrane anchor subunit

Compound/PW C000174/Stoichiometry/1.0
type: Stoichiometry
physical entity: Succinic acid
stoichiometric coefficient: 1.0

Ubiquinol-1
type: SmallMoleculeReference
xref: Reference/PubChem-compound 447920
chemical formula: C14H20O4
molecular weight: 252.13615
structure: ChemicalStructure/PW C042948

Ubiquinone-1
type: SmallMolecule
entity reference: Ubiquinone-1

Reference/PubChem-compound 5893
type: UnificationXref
id: 5893
db: PubChem-compound

Transporter
type: ProteinReference
xref: Reference/UniProt D4DQD2
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Reference/CAS 110-15-6
type: UnificationXref
id: 110-15-6
db: CAS

ChemicalStructure/PW C001065
type: ChemicalStructure
structure format: SMILES
structure data: O=O

Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 2.0

Transporter, SSS family
type: ProteinReference
xref: Reference/UniProt D4DQC6
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit A
type: ProteinReference
xref: Reference/UniProt D4DPL9
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Membrane protein
type: ProteinReference
xref: Reference/UniProt D4DP37
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit J
type: ProteinReference
xref: Reference/UniProt D4DSX2
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH-quinone oxidoreductase subunit H
type: ProteinReference
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Reference/UniProt D4DV40
type: UnificationXref
id: D4DV40
db: UniProt

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

Reference/UniProt D4DV42
type: UnificationXref
id: D4DV42
db: UniProt

Reference/PathWhiz PW000936
type: UnificationXref
id: PW000936
db: PathWhiz

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 15379
type: UnificationXref
id: CHEBI:15379
db: ChEBI

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

cytochrome bd-I terminal oxidase
type: Complex
cellular location: Inner Membrane
component: Integral membrane protein, PqiA family
component: Glutathione peroxidase
component: Intein C-terminal splicing region

NADH-quinone oxidoreductase
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase

Succinate dehydrogenase cytochrome b556 subunit
type: ProteinReference
xref: Reference/UniProt D4DV39

Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Succinate dehydrogenase hydrophobic membrane anchor subunit
type: ProteinReference
xref: Reference/UniProt D4DV40

Succinate dehydrogenase iron-sulfur subunit
type: ProteinReference
xref: Reference/UniProt D4DV42

Intein C-terminal splicing region
type: ProteinReference
xref: Reference/UniProt D4DMH9
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Cadmium, cobalt and zinc/H(+)-K(+) antiporter
type: ProteinReference
xref: Reference/UniProt D4DP63
organism: Neisseria elongata subsp. glycolytica ATCC 29315

NADH dehydrogenase subunit L
type: Protein
cellular location: Inner Membrane
entity reference: NADH dehydrogenase subunit L

Glutathione peroxidase
type: ProteinReference
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Integral membrane protein, PqiA family
type: ProteinReference
xref: Reference/UniProt D4DUN6
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Reference/PubChem-compound 4462
type: UnificationXref
id: 4462
db: PubChem-compound

1.6.99.5
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/5.0
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001144 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000721 Inner Membrane/Stoichiometry/1.0
right: NAD
right: Ubiquinol-1
right: Hydrogen Ion
spontaneous: false
EC number: 1.6.99.5
left: Ubiquinone-1
left: NADH
left: Hydrogen Ion
name: 5 Hydrogen Ion + NADH + Ubiquinone-1 → Hydrogen Ion + NAD + Ubiquinol-1
conversion direction: LEFT_TO_RIGHT

1.10.3.10
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
right: Water
right: Ubiquinone-1
right: Hydrogen Ion
spontaneous: false
EC number: 1.10.3.10
left: Ubiquinol-1
left: Oxygen
left: Hydrogen Ion
name: 4 Hydrogen Ion + Oxygen + 2 Ubiquinol-1 → 4 Hydrogen Ion + 2 Ubiquinone-1 + 2 Water
conversion direction: LEFT_TO_RIGHT

ReactionCoupledTransport18747
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/8.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
right: Water
right: Ubiquinone-1
right: Hydrogen Ion
spontaneous: false
left: Ubiquinol-1
left: Oxygen
left: Hydrogen Ion
name: 8 Hydrogen Ion + Oxygen + 2 Ubiquinol-1 → 8 Hydrogen Ion + 2 Ubiquinone-1 + 2 Water
conversion direction: LEFT_TO_RIGHT

1.10.3.14
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
right: Water
right: Ubiquinone-1
right: Hydrogen Ion
spontaneous: false
EC number: 1.10.3.14
left: Ubiquinol-1
left: Oxygen
left: Hydrogen Ion
name: 4 Hydrogen Ion + Oxygen + 2 Ubiquinol-1 → 4 Hydrogen Ion + 2 Ubiquinone-1 + 2 Water
conversion direction: LEFT_TO_RIGHT

Reference/UniProt D4DPG9
type: UnificationXref
id: D4DPG9
db: UniProt

Compound/PW C040034 Inner Membrane/Stoichiometry/8.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 8.0

Reference/CAS 727-81-1
type: UnificationXref
id: 727-81-1
db: CAS

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

Reference/UniProt D4DP63
type: UnificationXref
id: D4DP63
db: UniProt

Reference/HMDB HMDB0002012
type: UnificationXref
id: HMDB0002012
db: HMDB

Reference/BioCyc NADH
type: UnificationXref
id: NADH
db: BioCyc

Reference/BioCyc NAD
type: UnificationXref
id: NAD
db: BioCyc

ReactionCoupledTransportCatalysis18810
type: Catalysis
controller: NADH:ubiquinone oxidoreductase I
controlled: 1.6.99.5
control type: ACTIVATION

NADH dehydrogenase
type: Protein
cellular location: Inner Membrane
entity reference: NADH dehydrogenase

Ubiquinol-1
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Ubiquinol-1

Reference/PubChem-compound 977
type: UnificationXref
id: 977
db: PubChem-compound

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

Reference/UniProt D4DV39
type: UnificationXref
id: D4DV39
db: UniProt

ChemicalStructure/PW C000088
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)\C=C\C(O)=O

NADH-quinone oxidoreductase subunit D
type: Protein
cellular location: Inner Membrane
entity reference: NADH-quinone oxidoreductase subunit D

ReactionCoupledTransportCatalysis18809
type: Catalysis
controller: cytochrome bo terminal oxidase
controlled: ReactionCoupledTransport18747
control type: ACTIVATION

Reference/UniProt D4DN33
type: UnificationXref
id: D4DN33
db: UniProt

Compound/PW C000088/Stoichiometry/1.0
type: Stoichiometry
physical entity: Fumaric acid
stoichiometric coefficient: 1.0

Thiol:disulfide interchange protein DsbD
type: ProteinReference
xref: Reference/UniProt D4DPG9
organism: Neisseria elongata subsp. glycolytica ATCC 29315

Compound/PW C000721 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NAD
stoichiometric coefficient: 1.0