Reference/PubChem-compound 6022
type: UnificationXref
id: 6022
db: PubChem-compound

Reference/ChemSpider 17215925
type: UnificationXref
id: 17215925
db: ChemSpider

Phosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Phosphate

Acetyl-CoA
type: SmallMoleculeReference
xref: Reference/BioCyc ACETYL-COA
xref: Reference/PubChem-compound 444493
xref: Reference/HMDB HMDB0001206
xref: Reference/ChemSpider 392413
xref: Reference/CAS 72-89-9
xref: Reference/ChEBI CHEBI 15351
xref: Reference/KEGG Compound C00024
chemical formula: C23H38N7O17P3S
molecular weight: 809.1258
structure: ChemicalStructure/PW C000940

Reference/PubChem-compound 442450
type: UnificationXref
id: 442450
db: PubChem-compound

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Compound/PW C001420 Cytoplasm/Stoichiometry/2.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 2.0

Reference/PubChem-compound 3315
type: UnificationXref
id: 3315
db: PubChem-compound

(S)-3-Hydroxybutanoyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: (S)-3-Hydroxybutanoyl-CoA

Reference/ChemSpider 388353
type: UnificationXref
id: 388353
db: ChemSpider

Compound/PW C247519 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: (S)-3-Hydroxybutanoyl-CoA
stoichiometric coefficient: 1.0

Benzoyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Benzoyl-CoA

Reference/PubChem-compound 439153
type: UnificationXref
id: 439153
db: PubChem-compound

FADH2
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 17877
xref: Reference/PubChem-compound 4556
chemical formula: C27H35N9O15P2
molecular weight: 787.1728
structure: ChemicalStructure/PW C109015

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

Reference/BioCyc 3-HYDROXYPIMELYL-COA
type: UnificationXref
id: 3-HYDROXYPIMELYL-COA
db: BioCyc

Compound/PW C000143 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 1.0

Adenosine monophosphate
type: SmallMoleculeReference
xref: Reference/CAS 61-19-8
xref: Reference/ChemSpider 5858
xref: Reference/HMDB HMDB0000045
xref: Reference/BioCyc AMP
xref: Reference/ChEBI CHEBI 16027
xref: Reference/PubChem-compound 6083
xref: Reference/KEGG Compound C00020
chemical formula: C10H14N5O7P
molecular weight: 347.06308
structure: ChemicalStructure/PW C000032

TransportCatalysis67404
type: Catalysis
controller: MFS transporter
controlled: Transport90259
control type: ACTIVATION

6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA

Reference/ChEBI CHEBI 16027
type: UnificationXref
id: CHEBI:16027
db: ChEBI

Reference/HMDB HMDB0000538
type: UnificationXref
id: HMDB0000538
db: HMDB

ChemicalStructure/PW C097007
type: ChemicalStructure
structure format: SMILES
structure data: [O-]P([O-])([O-])=O

diphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: diphosphate

Reference/BioCyc ATP
type: UnificationXref
id: ATP
db: BioCyc

Reference/PubChem-compound 8558
type: UnificationXref
id: 8558
db: PubChem-compound

Tannerella forsythia
type: BioSource
xref: Reference/TAXONOMY 28112

Compound/PW C001032 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Glutaryl-CoA
stoichiometric coefficient: 1.0

Compound/PW C001522 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Benzoyl-CoA
stoichiometric coefficient: 1.0

Reference/PubChem-compound 6816
type: UnificationXref
id: 6816
db: PubChem-compound

1.1.1.1
type: BiochemicalReaction
participant stoichiometry: Compound/PW C247518 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007735 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000721 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001144 Cytoplasm/Stoichiometry/1.0
right: Hydrogen Ion
right: 6-Oxocyclohex-1-ene-1-carboxyl-CoA
right: NADH
spontaneous: false
EC number: 1.1.1.1
left: 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
left: NAD
name: 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA + NAD ↔ 6-Oxocyclohex-1-ene-1-carboxyl-CoA + Hydrogen Ion + NADH
conversion direction: REVERSIBLE

FADH2
type: SmallMolecule
cellular location: Cytoplasm
entity reference: FADH2

Water
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Water

Reaction1510277
type: BiochemicalReaction
participant stoichiometry: Compound/PW C041102 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C247517 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001522 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C041101 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Cytoplasm/Stoichiometry/2.0
participant stoichiometry: Compound/PW C097007 Cytoplasm/Stoichiometry/2.0
participant stoichiometry: Compound/PW C000414 Cytoplasm/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001034 Cytoplasm/Stoichiometry/2.0
right: Phosphate
right: Cyclohexa-1,5-diene-1-carbonyl-CoA
right: Adenosine diphosphate
right: Oxidized ferredoxin
spontaneous: false
left: Reduced ferredoxin
left: Benzoyl-CoA
left: Water
left: Adenosine triphosphate
name: 2 Adenosine triphosphate + Benzoyl-CoA + Reduced ferredoxin + 2 Water ↔ 2 Adenosine diphosphate + Cyclohexa-1,5-diene-1-carbonyl-CoA + Oxidized ferredoxin + 2 Phosphate
conversion direction: REVERSIBLE

Reaction1510278
type: BiochemicalReaction
participant stoichiometry: Compound/PW C247517 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C247518 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Cytoplasm/Stoichiometry/1.0
right: 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
spontaneous: false
left: Water
left: Cyclohexa-1,5-diene-1-carbonyl-CoA
name: Cyclohexa-1,5-diene-1-carbonyl-CoA + Water ↔ 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
conversion direction: REVERSIBLE

Reference/BioCyc 6-OXOCYCLOHEX-1-ENE-1-CARBONYL-COA
type: UnificationXref
id: 6-OXOCYCLOHEX-1-ENE-1-CARBONYL-COA
db: BioCyc

Reference/ChEBI CHEBI 15846
type: UnificationXref
id: CHEBI:15846
db: ChEBI

Reference/BioCyc ADP
type: UnificationXref
id: ADP
db: BioCyc

Serine/threonine-protein phosphatase
type: Protein
cellular location: Cytoplasm
entity reference: Serine/threonine-protein phosphatase

Reference/CAS 102680-35-3
type: UnificationXref
id: 102680-35-3
db: CAS

Reference/ChEBI CHEBI 17908
type: UnificationXref
id: CHEBI:17908
db: ChEBI

Benzoate
type: SmallMolecule
cellular location: Extracellular Space
entity reference: Benzoate

Reference/CAS 53-59-8
type: UnificationXref
id: 53-59-8
db: CAS

Reference/ChEBI CHEBI 16238
type: UnificationXref
id: CHEBI:16238
db: ChEBI

Reference/ChemSpider 5742
type: UnificationXref
id: 5742
db: ChemSpider

Reference/PubChem-compound 5280381
type: UnificationXref
id: 5280381
db: PubChem-compound

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Compound/PW C001034 Cytoplasm/Stoichiometry/2.0
type: Stoichiometry
physical entity: Adenosine diphosphate
stoichiometric coefficient: 2.0

Reference/KEGG Compound C09821
type: UnificationXref
id: C09821
db: KEGG Compound

Reference/KEGG Compound C00332
type: UnificationXref
id: C00332
db: KEGG Compound

Reference/ChEBI CHEBI 16474
type: UnificationXref
id: CHEBI:16474
db: ChEBI

Compound/PW C001099 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Coenzyme A
stoichiometric coefficient: 1.0

Acyl-CoA dehydrogenase
type: ProteinReference
organism: Tannerella forsythia

ReactionCatalysis1504677
type: Catalysis
controller: Acetyl-CoA synthetase
controlled: Reaction1462464
control type: ACTIVATION

Reduced ferredoxin
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Reduced ferredoxin

Reference/KEGG Compound C06322
type: UnificationXref
id: C06322
db: KEGG Compound

Carbon dioxide
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Carbon dioxide

ChemicalStructure/PW C001522
type: ChemicalStructure
structure format: SMILES

MFS transporter
type: ProteinReference

Serine/threonine-protein phosphatase
type: ProteinReference
organism: Tannerella forsythia

Crotonoyl-CoA
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00877
xref: Reference/HMDB HMDB0002009
xref: Reference/PubChem-compound 5280381
xref: Reference/CAS 102680-35-3
xref: Reference/BioCyc CPD-1083
xref: Reference/ChEBI CHEBI 15473
xref: Reference/ChemSpider 4444072
chemical formula: C25H40N7O17P3S
molecular weight: 835.1414
structure: ChemicalStructure/PW C001345

Reference/ChemSpider 274
type: UnificationXref
id: 274
db: ChemSpider

Acetyl-CoA synthetase
type: Protein
cellular location: Cytoplasm
entity reference: Acetyl-CoA synthetase

Reference/ChEBI CHEBI 16908
type: UnificationXref
id: CHEBI:16908
db: ChEBI

Reference/ChemSpider 5858
type: UnificationXref
id: 5858
db: ChemSpider

Adenosine monophosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Adenosine monophosphate

ChemicalStructure/PW C040813
type: ChemicalStructure
structure format: SMILES

1,4-dihydroxy-2-naphthoyl-CoA synthase
type: ProteinReference
organism: Tannerella forsythia

GroES-like protein
type: ProteinReference
xref: Reference/UniProt G8UHM5
organism: Tannerella forsythia

Compound/PW C000414 Cytoplasm/Stoichiometry/2.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 2.0

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Acetylhydrolase
type: ProteinReference
organism: Tannerella forsythia

TCA Cycle
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway589921
pathway component: SubPathwayInteraction589921
xref: Reference/PathWhiz PW270417
xref: Reference/SMPDB SMP0268623
name: SubPathway

ChemicalStructure/PW C001099
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C247517
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C247518
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C247519
type: ChemicalStructure
structure format: SMILES

Reference/SMPDB SMP0527527
type: UnificationXref
id: SMP0527527
db: SMPDB

NADPH
type: SmallMoleculeReference
xref: Reference/CAS 53-57-6
xref: Reference/HMDB HMDB0000221
xref: Reference/PubChem-compound 22833512
xref: Reference/BioCyc NADPH
xref: Reference/ChemSpider 17215925
xref: Reference/KEGG Compound C00005
xref: Reference/ChEBI CHEBI 16474
chemical formula: C21H30N7O17P3
molecular weight: 745.0911
structure: ChemicalStructure/PW C000146

1,4-dihydroxy-2-naphthoyl-CoA synthase
type: ProteinReference
organism: Tannerella forsythia

NADP
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00006
xref: Reference/CAS 53-59-8
xref: Reference/BioCyc NAD(P)
xref: Reference/HMDB HMDB0000217
xref: Reference/ChEBI CHEBI 18009
xref: Reference/PubChem-compound 5886
xref: Reference/ChemSpider 5675
chemical formula: C21H28N7O17P3
molecular weight: 743.07544
structure: ChemicalStructure/PW C000143

Cyclohexa-1,5-diene-1-carbonyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Cyclohexa-1,5-diene-1-carbonyl-CoA

Acetyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Acetyl-CoA
name: SubPathwayInput

Reference/ChEBI CHEBI 15520
type: UnificationXref
id: CHEBI:15520
db: ChEBI

Reference/BioCyc NADPH
type: UnificationXref
id: NADPH
db: BioCyc

Compound/PW C040034 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15524
type: UnificationXref
id: CHEBI:15524
db: ChEBI

ChemicalStructure/PW C247515
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)C1=CC=CC=C1

Reference/ChemSpider 4444072
type: UnificationXref
id: 4444072
db: ChemSpider

Reference/CAS 58-68-4
type: UnificationXref
id: 58-68-4
db: CAS

Reference/HMDB HMDB0001423
type: UnificationXref
id: HMDB0001423
db: HMDB

ChemicalStructure/PW C001345
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000217
type: UnificationXref
id: HMDB0000217
db: HMDB

Compound/PW C000146 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 1.0

Reference/CAS 124-38-9
type: UnificationXref
id: 124-38-9
db: CAS

Compound/PW C097007 Cytoplasm/Stoichiometry/2.0
type: Stoichiometry
physical entity: Phosphate
stoichiometric coefficient: 2.0

Reference/ChEBI CHEBI 28168
type: UnificationXref
id: CHEBI:28168
db: ChEBI

Reference/ChemSpider 390888
type: UnificationXref
id: 390888
db: ChemSpider

Oxidized ferredoxin
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00139
xref: Reference/ChEBI CHEBI 17908

Reference/KEGG Compound C00008
type: UnificationXref
id: C00008
db: KEGG Compound

Reduced ferredoxin
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 17513
xref: Reference/KEGG Compound C00138

Reference/KEGG Compound C00006
type: UnificationXref
id: C00006
db: KEGG Compound

Reference/ChEBI CHEBI 18009
type: UnificationXref
id: CHEBI:18009
db: ChEBI

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Reference/ChemSpider 559059
type: UnificationXref
id: 559059
db: ChemSpider

diphosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 3315
chemical formula: C34H28N6O14S4
molecular weight: 872.0546
structure: ChemicalStructure/PW C040813

Reference/KEGG Compound C00005
type: UnificationXref
id: C00005
db: KEGG Compound

Reference/KEGG Compound C00004
type: UnificationXref
id: C00004
db: KEGG Compound

1,4-dihydroxy-2-naphthoyl-CoA synthase
type: Protein
cellular location: Cytoplasm
entity reference: 1,4-dihydroxy-2-naphthoyl-CoA synthase

Reference/BioCyc CPD-1083
type: UnificationXref
id: CPD-1083
db: BioCyc

Reference/KEGG Compound C00003
type: UnificationXref
id: C00003
db: KEGG Compound

Reference/KEGG Compound C00002
type: UnificationXref
id: C00002
db: KEGG Compound

NADP
type: SmallMolecule
cellular location: Cytoplasm
entity reference: NADP

Compound/PW C247517 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Cyclohexa-1,5-diene-1-carbonyl-CoA
stoichiometric coefficient: 1.0

FAD
type: SmallMolecule
cellular location: Cytoplasm
entity reference: FAD

ChemicalStructure/PW C000143
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000221
type: UnificationXref
id: HMDB0000221
db: HMDB

Reference/CAS 103192-48-9
type: UnificationXref
id: 103192-48-9
db: CAS

Compound/PW C109015 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: FADH2
stoichiometric coefficient: 1.0

Benzoate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Benzoate

ChemicalStructure/PW C000146
type: ChemicalStructure
structure format: SMILES

3-Hydroxypimelyl-CoA
type: SmallMoleculeReference
xref: Reference/BioCyc 3-HYDROXYPIMELYL-COA
xref: Reference/KEGG Compound C06714
xref: Reference/ChemSpider 389938
xref: Reference/PubChem-compound 441146
xref: Reference/ChEBI CHEBI 15485
xref: Reference/HMDB HMDB0012155
chemical formula: C28H46N7O20P3S
molecular weight: 925.1731
structure: ChemicalStructure/PW C007712

Reference/CAS 53-57-6
type: UnificationXref
id: 53-57-6
db: CAS

GroES-like protein
type: Protein
cellular location: Cytoplasm
entity reference: GroES-like protein

3-Hydroxypimelyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: 3-Hydroxypimelyl-CoA

Reference/KEGG Compound C00139
type: UnificationXref
id: C00139
db: KEGG Compound

Reference/KEGG Compound C00138
type: UnificationXref
id: C00138
db: KEGG Compound

FAD
type: SmallMoleculeReference
xref: Reference/CAS 146-14-5
xref: Reference/HMDB HMDB0001248
xref: Reference/ChEBI CHEBI 16238
xref: Reference/BioCyc FAD
xref: Reference/PubChem-compound 643975
xref: Reference/ChemSpider 559059
xref: Reference/KEGG Compound C00016
chemical formula: C27H33N9O15P2
molecular weight: 785.1571
structure: ChemicalStructure/PW C000964

NAD
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15846
xref: Reference/HMDB HMDB0000902
xref: Reference/CAS 53-84-9
xref: Reference/KEGG Compound C00003
xref: Reference/PubChem-compound 5893
xref: Reference/BioCyc NAD
xref: Reference/ChemSpider 5682
chemical formula: C21H27N7O14P2
molecular weight: 663.10913
structure: ChemicalStructure/PW C000721

Adenosine triphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Adenosine triphosphate

Reference/KEGG Compound C00011
type: UnificationXref
id: C00011
db: KEGG Compound

ChemicalStructure/PW C001316
type: ChemicalStructure
structure format: SMILES
structure data: O=C=O

Reference/KEGG Compound C00010
type: UnificationXref
id: C00010
db: KEGG Compound

Reference/HMDB HMDB0000902
type: UnificationXref
id: HMDB0000902
db: HMDB

Reference/KEGG Compound C00016
type: UnificationXref
id: C00016
db: KEGG Compound

Reference/PubChem-compound 441146
type: UnificationXref
id: 441146
db: PubChem-compound

Reference/PubChem-compound 441147
type: UnificationXref
id: 441147
db: PubChem-compound

Extracellular Space
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005615

ChemicalStructure/PW C109015
type: ChemicalStructure
structure format: SMILES

Compound/PW C000964 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: FAD
stoichiometric coefficient: 1.0

Acetoacetyl-CoA
type: SmallMoleculeReference
xref: Reference/BioCyc ACETOACETYL-COA
xref: Reference/PubChem-compound 439214
xref: Reference/ChEBI CHEBI 15345
xref: Reference/CAS 1420-36-6
xref: Reference/HMDB HMDB0001484
xref: Reference/KEGG Compound C00332
xref: Reference/ChemSpider 388353
chemical formula: C25H40N7O18P3S
molecular weight: 851.13635
structure: ChemicalStructure/PW C001142

NADH
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001487
xref: Reference/CAS 58-68-4
xref: Reference/PubChem-compound 439153
xref: Reference/BioCyc NADH
xref: Reference/ChemSpider 388299
xref: Reference/KEGG Compound C00004
xref: Reference/ChEBI CHEBI 16908
chemical formula: C21H29N7O14P2
molecular weight: 665.12476
structure: ChemicalStructure/PW C001144

Reference/BioCyc NAD(P)
type: UnificationXref
id: NAD(P)
db: BioCyc

Compound/PW C247515 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Benzoate
stoichiometric coefficient: 1.0

Compound/PW C001420 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 1.0

Acetoacetyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Acetoacetyl-CoA

Reference/PubChem-compound 5957
type: UnificationXref
id: 5957
db: PubChem-compound

Reference/HMDB HMDB0001206
type: UnificationXref
id: HMDB0001206
db: HMDB

Reaction1510289
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001099 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000940 Cytoplasm/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001142 Cytoplasm/Stoichiometry/1.0
right: Acetyl-CoA
spontaneous: false
left: Acetoacetyl-CoA
left: Coenzyme A
name: Acetoacetyl-CoA + Coenzyme A ↔ 2 Acetyl-CoA
conversion direction: REVERSIBLE

Benzoate degradation I
type: Pathway
pathway order: PathwaySubPathway/589921
pathway order: PathwayEnzymeReaction/7534270
pathway order: PathwayEnzymeReaction/7534262
pathway order: PathwayEnzymeReaction/7534273
pathway order: PathwayEnzymeReaction/7534261
pathway order: PathwayEnzymeReaction/7534264
pathway order: PathwayEnzymeReaction/7534275
pathway order: PathwayTransport/7534277
pathway order: PathwayEnzymeReaction/7534263
pathway order: PathwayEnzymeReaction/7534265
pathway order: PathwayEnzymeReaction/7534268
pathway order: PathwayEnzymeReaction/7534267
pathway order: PathwayEnzymeReaction/7534259
pathway component: ReactionCatalysis1556748
pathway component: ReactionCatalysis1504677
pathway component: Reaction1510289
pathway component: Reaction1510287
pathway component: Reaction1510285
pathway component: Reaction1510282
pathway component: Reaction1462464
pathway component: 1.3.8.6
pathway component: Reaction1510280
pathway component: TransportCatalysis67404
pathway component: Reaction1510281
pathway component: ReactionCatalysis1556739
pathway component: ReactionCatalysis1556738
pathway component: ReactionCatalysis1556737
pathway component: ReactionCatalysis1556736
pathway component: ReactionCatalysis1556746
pathway component: Transport90259
pathway component: TCA Cycle
pathway component: ReactionCatalysis1556744
pathway component: 1.1.1.1
pathway component: ReactionCatalysis1556742
pathway component: ReactionCatalysis1556741
pathway component: Reaction1510277
pathway component: ReactionCatalysis1556740
pathway component: Reaction1510278
xref: Reference/SMPDB SMP0527527
xref: Reference/PathWhiz PW555865
organism: Tannerella forsythia

Reaction1510287
type: BiochemicalReaction
participant stoichiometry: Compound/PW C247519 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000146 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000143 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001142 Cytoplasm/Stoichiometry/1.0
right: Hydrogen Ion
right: Acetoacetyl-CoA
right: NADPH
spontaneous: false
left: (S)-3-Hydroxybutanoyl-CoA
left: NADP
name: (S)-3-Hydroxybutanoyl-CoA + NADP ↔ Acetoacetyl-CoA + Hydrogen Ion + NADPH
conversion direction: REVERSIBLE

Reaction1510285
type: BiochemicalReaction
participant stoichiometry: Compound/PW C247519 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001345 Cytoplasm/Stoichiometry/1.0
right: (S)-3-Hydroxybutanoyl-CoA
spontaneous: false
left: Water
left: Crotonoyl-CoA
name: Crotonoyl-CoA + Water ↔ (S)-3-Hydroxybutanoyl-CoA
conversion direction: REVERSIBLE

Reaction1510282
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001099 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007715 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000940 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001032 Cytoplasm/Stoichiometry/1.0
right: Acetyl-CoA
right: Glutaryl-CoA
spontaneous: false
left: Coenzyme A
left: 3-Oxopimelyl-CoA
name: 3-Oxopimelyl-CoA + Coenzyme A ↔ Acetyl-CoA + Glutaryl-CoA
conversion direction: REVERSIBLE

Reference/CAS 6756-74-7
type: UnificationXref
id: 6756-74-7
db: CAS

1.3.8.6
type: BiochemicalReaction
participant stoichiometry: Compound/PW C000964 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C109015 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001316 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001345 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001032 Cytoplasm/Stoichiometry/1.0
right: Carbon dioxide
right: FADH2
right: Crotonoyl-CoA
spontaneous: false
EC number: 1.3.8.6
left: FAD
left: Glutaryl-CoA
name: FAD + Glutaryl-CoA ↔ Carbon dioxide + Crotonoyl-CoA + FADH2
conversion direction: REVERSIBLE

Reaction1510280
type: BiochemicalReaction
participant stoichiometry: Compound/PW C007735 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007712 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001420 Cytoplasm/Stoichiometry/2.0
right: 3-Hydroxypimelyl-CoA
spontaneous: false
left: 6-Oxocyclohex-1-ene-1-carboxyl-CoA
left: Water
name: 6-Oxocyclohex-1-ene-1-carboxyl-CoA + 2 Water ↔ 3-Hydroxypimelyl-CoA
conversion direction: REVERSIBLE

Reaction1510281
type: BiochemicalReaction
participant stoichiometry: Compound/PW C040034 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007715 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C007712 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000721 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001144 Cytoplasm/Stoichiometry/1.0
right: Hydrogen Ion
right: NADH
right: 3-Oxopimelyl-CoA
spontaneous: false
left: 3-Hydroxypimelyl-CoA
left: NAD
name: 3-Hydroxypimelyl-CoA + NAD ↔ 3-Oxopimelyl-CoA + Hydrogen Ion + NADH
conversion direction: REVERSIBLE

Reference/PathWhiz PW270417
type: UnificationXref
id: PW270417
db: PathWhiz

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Reference/ChEBI CHEBI 15515
type: UnificationXref
id: CHEBI:15515
db: ChEBI

Reference/CAS 56-65-5
type: UnificationXref
id: 56-65-5
db: CAS

Reference/KEGG Compound C00020
type: UnificationXref
id: C00020
db: KEGG Compound

Reference/CAS 53-84-9
type: UnificationXref
id: 53-84-9
db: CAS

Phosphate
type: SmallMoleculeReference
xref: Reference/PubChem-compound 1061
chemical formula: O4P
molecular weight: 94.95342
structure: ChemicalStructure/PW C097007

Glutaryl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Glutaryl-CoA

Reference/KEGG Compound C00024
type: UnificationXref
id: C00024
db: KEGG Compound

Glutaryl-CoA
type: SmallMoleculeReference
xref: Reference/BioCyc GLUTARYL-COA
xref: Reference/CAS 103192-48-9
xref: Reference/ChEBI CHEBI 15524
xref: Reference/PubChem-compound 439252
xref: Reference/HMDB HMDB0001339
xref: Reference/KEGG Compound C00527
xref: Reference/ChemSpider 388388
chemical formula: C26H42N7O19P3S
molecular weight: 881.1469
structure: ChemicalStructure/PW C001032

Adenosine diphosphate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00008
xref: Reference/PubChem-compound 6022
xref: Reference/ChemSpider 5800
xref: Reference/CAS 58-64-0
xref: Reference/BioCyc ADP
xref: Reference/ChEBI CHEBI 16761
xref: Reference/HMDB HMDB0001341
chemical formula: C10H15N5O10P2
molecular weight: 427.02942
structure: ChemicalStructure/PW C001034

Reference/GENE ONTOLOGY GO 0005615
type: UnificationXref
id: GO:0005615
db: GENE ONTOLOGY

Reference/GENE ONTOLOGY GO 0005737
type: UnificationXref
id: GO:0005737
db: GENE ONTOLOGY

Reference/HMDB HMDB0001339
type: UnificationXref
id: HMDB0001339
db: HMDB

Coenzyme A
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Coenzyme A

Reference/ChEBI CHEBI 15505
type: UnificationXref
id: CHEBI:15505
db: ChEBI

Acyl-CoA dehydrogenase
type: Protein
cellular location: Cytoplasm
entity reference: Acyl-CoA dehydrogenase

Compound/PW C000940 Cytoplasm/Stoichiometry/2.0
type: Stoichiometry
physical entity: Acetyl-CoA
stoichiometric coefficient: 2.0

Beta-ketoacyl-[acyl-carrier-protein] synthase family protein
type: ProteinReference
organism: Tannerella forsythia

NADH
type: SmallMolecule
cellular location: Cytoplasm
entity reference: NADH

ChemicalStructure/PW C000964
type: ChemicalStructure
structure format: SMILES

ChemicalStructure/PW C000721
type: ChemicalStructure
structure format: SMILES

Reference/ChemSpider 5682
type: UnificationXref
id: 5682
db: ChemSpider

ChemicalStructure/PW C001144
type: ChemicalStructure
structure format: SMILES

Reference/ChEBI CHEBI 1146900
type: UnificationXref
id: CHEBI:1146900
db: ChEBI

Reference/BioCyc AMP
type: UnificationXref
id: AMP
db: BioCyc

ChemicalStructure/PW C001142
type: ChemicalStructure
structure format: SMILES

Compound/PW C001316 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Carbon dioxide
stoichiometric coefficient: 1.0

Compound/PW C247515 Extracellular Space/Stoichiometry/1.0
type: Stoichiometry
physical entity: Benzoate
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0001341
type: UnificationXref
id: HMDB0001341
db: HMDB

Reference/ChEBI CHEBI 17513
type: UnificationXref
id: CHEBI:17513
db: ChEBI

Reference/ChEBI CHEBI 15453
type: UnificationXref
id: CHEBI:15453
db: ChEBI

Reference/BioCyc CO-A
type: UnificationXref
id: CO-A
db: BioCyc

Reference/ChEBI CHEBI 17877
type: UnificationXref
id: CHEBI:17877
db: ChEBI

Benzoyl-CoA
type: SmallMoleculeReference
xref: Reference/PubChem-compound 439248
xref: Reference/KEGG Compound C00512
xref: Reference/ChEBI CHEBI 15515
xref: Reference/ChemSpider 388384
xref: Reference/CAS 6756-74-7
xref: Reference/HMDB HMDB0002252
chemical formula: C28H40N7O17P3S
molecular weight: 871.1414
structure: ChemicalStructure/PW C001522

(S)-3-Hydroxybutanoyl-CoA
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15453
xref: Reference/KEGG Compound C01144
xref: Reference/PubChem-compound 4375
chemical formula: C25H42N7O18P3S
molecular weight: 853.152
structure: ChemicalStructure/PW C247519

Reference/ChemSpider 5675
type: UnificationXref
id: 5675
db: ChemSpider

ReactionCatalysis1556739
type: Catalysis
controller: 1,4-dihydroxy-2-naphthoyl-CoA synthase
controlled: Reaction1510280
control type: ACTIVATION

Reference/CAS 72-89-9
type: UnificationXref
id: 72-89-9
db: CAS

Benzoate
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00180
xref: Reference/PubChem-compound 3480
xref: Reference/ChEBI CHEBI 16150 30746
chemical formula: C7H6O2
molecular weight: 122.03678
structure: ChemicalStructure/PW C247515

ReactionCatalysis1556738
type: Catalysis
controller: GroES-like protein
controlled: 1.1.1.1
control type: ACTIVATION

ReactionCatalysis1556737
type: Catalysis
controller: 1,4-dihydroxy-2-naphthoyl-CoA synthase
controlled: Reaction1510278
control type: ACTIVATION

6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
type: SmallMoleculeReference
xref: Reference/PubChem-compound 8970
xref: Reference/KEGG Compound C06749
xref: Reference/ChEBI CHEBI 15505
chemical formula: C28H44N7O18P3S
molecular weight: 891.16766
structure: ChemicalStructure/PW C247518

ReactionCatalysis1556736
type: Catalysis
controller: Serine/threonine-protein phosphatase
controlled: Reaction1510277
control type: ACTIVATION

Cyclohexa-1,5-diene-1-carbonyl-CoA
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15520
xref: Reference/KEGG Compound C06322
xref: Reference/PubChem-compound 8558
chemical formula: C28H42N7O17P3S
molecular weight: 873.1571
structure: ChemicalStructure/PW C247517

ChemicalStructure/PW C001034
type: ChemicalStructure
structure format: SMILES

ReactionCatalysis1556746
type: Catalysis
controller: Erythronate-4-phosphate dehydrogenase
controlled: Reaction1510287
control type: ACTIVATION

ChemicalStructure/PW C001032
type: ChemicalStructure
structure format: SMILES

ReactionCatalysis1556744
type: Catalysis
controller: 1,4-dihydroxy-2-naphthoyl-CoA synthase
controlled: Reaction1510285
control type: ACTIVATION

Coenzyme A
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 1146900
xref: Reference/HMDB HMDB0001423
xref: Reference/PubChem-compound 6816
xref: Reference/BioCyc CO-A
xref: Reference/ChemSpider 6557
xref: Reference/CAS 85-61-0
xref: Reference/KEGG Compound C00010
chemical formula: C21H36N7O16P3S
molecular weight: 767.11523
structure: ChemicalStructure/PW C001099

ReactionCatalysis1556742
type: Catalysis
controller: Acyl-CoA dehydrogenase
controlled: 1.3.8.6
control type: ACTIVATION

ReactionCatalysis1556741
type: Catalysis
controller: Acetylhydrolase
controlled: Reaction1510282
control type: ACTIVATION

ReactionCatalysis1556740
type: Catalysis
controller: 1,4-dihydroxy-2-naphthoyl-CoA synthase
controlled: Reaction1510281
control type: ACTIVATION

Cytoplasm
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0005737

Reference/ChEBI CHEBI 16150 30746
type: UnificationXref
id: CHEBI:16150 30746
db: ChEBI

Compound/PW C001144 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADH
stoichiometric coefficient: 1.0

Compound/PW C000940 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Acetyl-CoA
stoichiometric coefficient: 1.0

NADPH
type: SmallMolecule
cellular location: Cytoplasm
entity reference: NADPH

Reference/BioCyc ACETOACETYL-COA
type: UnificationXref
id: ACETOACETYL-COA
db: BioCyc

Reference/ChEBI CHEBI 15422
type: UnificationXref
id: CHEBI:15422
db: ChEBI

Reference/ChemSpider 6557
type: UnificationXref
id: 6557
db: ChemSpider

Reference/PubChem-compound 643975
type: UnificationXref
id: 643975
db: PubChem-compound

Reference/KEGG Compound C06714
type: UnificationXref
id: C06714
db: KEGG Compound

Compound/PW C001345 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Crotonoyl-CoA
stoichiometric coefficient: 1.0

Reference/KEGG Compound C06715
type: UnificationXref
id: C06715
db: KEGG Compound

Reference/KEGG Compound C01144
type: UnificationXref
id: C01144
db: KEGG Compound

3-Oxopimelyl-CoA
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0012158
xref: Reference/KEGG Compound C06715
xref: Reference/ChemSpider 389939
xref: Reference/ChEBI CHEBI 15492
xref: Reference/BioCyc 3-OXOPIMELOYL-COA
xref: Reference/PubChem-compound 441147
chemical formula: C28H44N7O20P3S
molecular weight: 923.1575
structure: ChemicalStructure/PW C007715

ChemicalStructure/PW C000940
type: ChemicalStructure
structure format: SMILES

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

Reference/ChemSpider 388299
type: UnificationXref
id: 388299
db: ChemSpider

SubPathwayInteraction589921
type: Interaction
name: SubPathwayReaction
name: SubPathway589921Reaction
participant: Acetyl-CoA

ReactionCatalysis1556748
type: Catalysis
controller: Beta-ketoacyl-[acyl-carrier-protein] synthase family protein
controlled: Reaction1510289
control type: ACTIVATION

Reference/KEGG Compound C00180
type: UnificationXref
id: C00180
db: KEGG Compound

Reference/CAS 61-19-8
type: UnificationXref
id: 61-19-8
db: CAS

Reference/HMDB HMDB0001487
type: UnificationXref
id: HMDB0001487
db: HMDB

ChemicalStructure/PW C000032
type: ChemicalStructure
structure format: SMILES

Hydrogen Ion
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Hydrogen Ion

Reference/PubChem-compound 439214
type: UnificationXref
id: 439214
db: PubChem-compound

MFS transporter
type: Protein
entity reference: MFS transporter

Reference/HMDB HMDB0001248
type: UnificationXref
id: HMDB0001248
db: HMDB

Acetyl-CoA synthetase
type: ProteinReference
organism: Tannerella forsythia

Adenosine diphosphate
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Adenosine diphosphate

Reference/HMDB HMDB0001484
type: UnificationXref
id: HMDB0001484
db: HMDB

Compound/PW C247518 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA
stoichiometric coefficient: 1.0

Reference/PubChem-compound 8970
type: UnificationXref
id: 8970
db: PubChem-compound

Adenosine triphosphate
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15422
xref: Reference/PubChem-compound 5957
xref: Reference/HMDB HMDB0000538
xref: Reference/CAS 56-65-5
xref: Reference/ChemSpider 5742
xref: Reference/BioCyc ATP
xref: Reference/KEGG Compound C00002
chemical formula: C10H16N5O13P3
molecular weight: 506.99576
structure: ChemicalStructure/PW C000414

Compound/PW C007715 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: 3-Oxopimelyl-CoA
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16526
type: UnificationXref
id: CHEBI:16526
db: ChEBI

Reference/PubChem-compound 4375
type: UnificationXref
id: 4375
db: PubChem-compound

Reference/ChEBI CHEBI 16761
type: UnificationXref
id: CHEBI:16761
db: ChEBI

Reference/HMDB HMDB0000045
type: UnificationXref
id: HMDB0000045
db: HMDB

6-Oxocyclohex-1-ene-1-carboxyl-CoA
type: SmallMoleculeReference
xref: Reference/ChemSpider 390888
xref: Reference/HMDB HMDB0012180
xref: Reference/BioCyc 6-OXOCYCLOHEX-1-ENE-1-CARBONYL-COA
xref: Reference/PubChem-compound 442450
xref: Reference/KEGG Compound C09821
xref: Reference/ChEBI CHEBI 28168
chemical formula: C28H42N7O18P3S
molecular weight: 889.152
structure: ChemicalStructure/PW C007735

1,4-dihydroxy-2-naphthoyl-CoA synthase
type: Protein
cellular location: Cytoplasm
entity reference: 1,4-dihydroxy-2-naphthoyl-CoA synthase

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

Reference/BioCyc GLUTARYL-COA
type: UnificationXref
id: GLUTARYL-COA
db: BioCyc

Reference/KEGG Compound C00877
type: UnificationXref
id: C00877
db: KEGG Compound

Reference/HMDB HMDB0012158
type: UnificationXref
id: HMDB0012158
db: HMDB

Reference/KEGG Compound C00512
type: UnificationXref
id: C00512
db: KEGG Compound

Reference/ChemSpider 5800
type: UnificationXref
id: 5800
db: ChemSpider

Reference/ChemSpider 392413
type: UnificationXref
id: 392413
db: ChemSpider

Acetylhydrolase
type: Protein
cellular location: Cytoplasm
entity reference: Acetylhydrolase

Carbon dioxide
type: SmallMoleculeReference
xref: Reference/PubChem-compound 280
xref: Reference/ChEBI CHEBI 16526
xref: Reference/ChemSpider 274
xref: Reference/HMDB HMDB0001967
xref: Reference/CAS 124-38-9
xref: Reference/KEGG Compound C00011
chemical formula: CO2
molecular weight: 43.98983
structure: ChemicalStructure/PW C001316

Reference/BioCyc 3-OXOPIMELOYL-COA
type: UnificationXref
id: 3-OXOPIMELOYL-COA
db: BioCyc

Reference/PubChem-compound 5893
type: UnificationXref
id: 5893
db: PubChem-compound

Reference/ChEBI CHEBI 15485
type: UnificationXref
id: CHEBI:15485
db: ChEBI

Reference/HMDB HMDB0012155
type: UnificationXref
id: HMDB0012155
db: HMDB

Reference/TAXONOMY 28112
type: UnificationXref
id: 28112
db: TAXONOMY

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Compound/PW C001142 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Acetoacetyl-CoA
stoichiometric coefficient: 1.0

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

Reference/CAS 1420-36-6
type: UnificationXref
id: 1420-36-6
db: CAS

Reaction1462464
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001099 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040813 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001522 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C247515 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000414 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000032 Cytoplasm/Stoichiometry/1.0
right: Adenosine monophosphate
right: Benzoyl-CoA
right: diphosphate
spontaneous: false
left: Benzoate
left: Adenosine triphosphate
left: Coenzyme A
name: Adenosine triphosphate + Benzoate + Coenzyme A ↔ Adenosine monophosphate + Benzoyl-CoA + diphosphate
conversion direction: REVERSIBLE

Compound/PW C000032 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine monophosphate
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/CAS 146-14-5
type: UnificationXref
id: 146-14-5
db: CAS

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Reference/KEGG Compound C06749
type: UnificationXref
id: C06749
db: KEGG Compound

Reference/KEGG Compound C00527
type: UnificationXref
id: C00527
db: KEGG Compound

Reference/CAS 58-64-0
type: UnificationXref
id: 58-64-0
db: CAS

Reference/PubChem-compound 4556
type: UnificationXref
id: 4556
db: PubChem-compound

ChemicalStructure/PW C000414
type: ChemicalStructure
structure format: SMILES

Reference/ChEBI CHEBI 15492
type: UnificationXref
id: CHEBI:15492
db: ChEBI

Reference/PubChem-compound 5886
type: UnificationXref
id: 5886
db: PubChem-compound

Compound/PW C000414 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Adenosine triphosphate
stoichiometric coefficient: 1.0

Oxidized ferredoxin
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Oxidized ferredoxin

ChemicalStructure/PW C007735
type: ChemicalStructure
structure format: SMILES

Erythronate-4-phosphate dehydrogenase
type: ProteinReference
organism: Tannerella forsythia

Reference/HMDB HMDB0002009
type: UnificationXref
id: HMDB0002009
db: HMDB

Reference/PubChem-compound 280
type: UnificationXref
id: 280
db: PubChem-compound

Reference/PathWhiz PW555865
type: UnificationXref
id: PW555865
db: PathWhiz

Reference/ChemSpider 389939
type: UnificationXref
id: 389939
db: ChemSpider

Reference/ChemSpider 389938
type: UnificationXref
id: 389938
db: ChemSpider

Erythronate-4-phosphate dehydrogenase
type: Protein
cellular location: Cytoplasm
entity reference: Erythronate-4-phosphate dehydrogenase

Compound/PW C007735 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: 6-Oxocyclohex-1-ene-1-carboxyl-CoA
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 15345
type: UnificationXref
id: CHEBI:15345
db: ChEBI

Reference/PubChem-compound 444493
type: UnificationXref
id: 444493
db: PubChem-compound

Reference/PubChem-compound 6083
type: UnificationXref
id: 6083
db: PubChem-compound

Compound/PW C000721 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: NAD
stoichiometric coefficient: 1.0

Compound/PW C007712 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: 3-Hydroxypimelyl-CoA
stoichiometric coefficient: 1.0

Compound/PW C041102 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Reduced ferredoxin
stoichiometric coefficient: 1.0

Reference/PubChem-compound 22833512
type: UnificationXref
id: 22833512
db: PubChem-compound

Reference/BioCyc ACETYL-COA
type: UnificationXref
id: ACETYL-COA
db: BioCyc

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

Reference/UniProt G8UHM5
type: UnificationXref
id: G8UHM5
db: UniProt

Reference/PubChem-compound 439252
type: UnificationXref
id: 439252
db: PubChem-compound

Reference/SMPDB SMP0268623
type: UnificationXref
id: SMP0268623
db: SMPDB

Reference/BioCyc FAD
type: UnificationXref
id: FAD
db: BioCyc

Reference/BioCyc NADH
type: UnificationXref
id: NADH
db: BioCyc

Reference/HMDB HMDB0002252
type: UnificationXref
id: HMDB0002252
db: HMDB

Reference/BioCyc NAD
type: UnificationXref
id: NAD
db: BioCyc

Crotonoyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: Crotonoyl-CoA

Reference/PubChem-compound 3480
type: UnificationXref
id: 3480
db: PubChem-compound

Reference/PubChem-compound 1061
type: UnificationXref
id: 1061
db: PubChem-compound

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

Compound/PW C041101 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxidized ferredoxin
stoichiometric coefficient: 1.0

Reference/ChemSpider 388384
type: UnificationXref
id: 388384
db: ChemSpider

Reference/HMDB HMDB0001967
type: UnificationXref
id: HMDB0001967
db: HMDB

3-Oxopimelyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: 3-Oxopimelyl-CoA

1,4-dihydroxy-2-naphthoyl-CoA synthase
type: Protein
cellular location: Cytoplasm
entity reference: 1,4-dihydroxy-2-naphthoyl-CoA synthase

Reference/ChEBI CHEBI 15351
type: UnificationXref
id: CHEBI:15351
db: ChEBI

Reference/ChemSpider 388388
type: UnificationXref
id: 388388
db: ChemSpider

Beta-ketoacyl-[acyl-carrier-protein] synthase family protein
type: Protein
cellular location: Cytoplasm
entity reference: Beta-ketoacyl-[acyl-carrier-protein] synthase family protein

Reference/ChEBI CHEBI 15473
type: UnificationXref
id: CHEBI:15473
db: ChEBI

Transport90259
type: Transport
participant stoichiometry: Compound/PW C247515 Cytoplasm/Stoichiometry/1.0
participant stoichiometry: Compound/PW C247515 Extracellular Space/Stoichiometry/1.0
right: Benzoate
spontaneous: false
left: Benzoate
name: Benzoate (→) Transport: Tannerella forsythia, Extracellular Space to Tannerella forsythia, Cell, Cytoplasm
conversion direction: LEFT_TO_RIGHT

Compound/PW C040813 Cytoplasm/Stoichiometry/1.0
type: Stoichiometry
physical entity: diphosphate
stoichiometric coefficient: 1.0

ChemicalStructure/PW C007715
type: ChemicalStructure
structure format: SMILES

Reference/PubChem-compound 439248
type: UnificationXref
id: 439248
db: PubChem-compound

ChemicalStructure/PW C007712
type: ChemicalStructure
structure format: SMILES

6-Oxocyclohex-1-ene-1-carboxyl-CoA
type: SmallMolecule
cellular location: Cytoplasm
entity reference: 6-Oxocyclohex-1-ene-1-carboxyl-CoA

Reference/HMDB HMDB0012180
type: UnificationXref
id: HMDB0012180
db: HMDB

1,4-dihydroxy-2-naphthoyl-CoA synthase
type: ProteinReference
organism: Tannerella forsythia

Reference/CAS 85-61-0
type: UnificationXref
id: 85-61-0
db: CAS

NAD
type: SmallMolecule
cellular location: Cytoplasm
entity reference: NAD