Putative dehydrogenase
type: Protein
cellular location: Inner Membrane
entity reference: Putative dehydrogenase

Reference/ChemSpider 937
type: UnificationXref
id: 937
db: ChemSpider

Succinic acid
type: SmallMolecule
entity reference: Succinic acid

Reference/PathWhiz PW685235
type: UnificationXref
id: PW685235
db: PathWhiz

Reference/PubChem-compound 439153
type: UnificationXref
id: 439153
db: PubChem-compound

Helicobacter canadensis MIT 98-5491
type: BioSource
xref: Reference/TAXONOMY 537970

Reference/CAS 110-17-8
type: UnificationXref
id: 110-17-8
db: CAS

Reference/PubChem-compound 21883788
type: UnificationXref
id: 21883788
db: PubChem-compound

ChemicalStructure/PW C001420
type: ChemicalStructure
structure format: SMILES
structure data: O

Reference/UniProt C5ZVC1
type: UnificationXref
id: C5ZVC1
db: UniProt

Porphyrin Metabolism
type: Pathway
pathway order: SubPathwayInteractionSteps/SubPathway446000
pathway component: SubPathwayInteraction446000
xref: Reference/SMPDB SMP0000953
xref: Reference/PathWhiz PW000936
name: SubPathway

Cytochrome c oxidase, cbb3-type, subunit I
type: Protein
cellular location: Inner Membrane
entity reference: Cytochrome c oxidase, cbb3-type, subunit I

cytochrome bd-I terminal oxidase
type: Complex
cellular location: Inner Membrane
component: Cytochrome d ubiquinol oxidase, subunit I
component: Purine nucleoside phosphorylase
component: Cytochrome d ubiquinol oxidase, subunit II

Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Ubiquinone-1
stoichiometric coefficient: 2.0

Reference/ChEBI CHEBI 16389
type: UnificationXref
id: CHEBI:16389
db: ChEBI

Reference/UniProt C5ZWU2
type: UnificationXref
id: C5ZWU2
db: UniProt

Reference/UniProt C5ZX61
type: UnificationXref
id: C5ZX61
db: UniProt

Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Oxygen
stoichiometric coefficient: 1.0

Reference/UniProt C5ZYH5
type: UnificationXref
id: C5ZYH5
db: UniProt

Reference/UniProt C5ZYH6
type: UnificationXref
id: C5ZYH6
db: UniProt

Reference/ChEBI CHEBI 15846
type: UnificationXref
id: CHEBI:15846
db: ChEBI

Reference/UniProt C5ZWD0
type: UnificationXref
id: C5ZWD0
db: UniProt

Reference/UniProt C5ZWD5
type: UnificationXref
id: C5ZWD5
db: UniProt

Twin-arginine translocation pathway signal
type: ProteinReference
xref: Reference/UniProt C5ZVC1
organism: Helicobacter canadensis MIT 98-5491

Purine nucleoside phosphorylase
type: Protein
cellular location: Inner Membrane
entity reference: Purine nucleoside phosphorylase

RodA protein mrdB
type: ProteinReference
xref: Reference/UniProt C5ZWU2
organism: Helicobacter canadensis MIT 98-5491

2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
type: Protein
entity reference: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

Reference/PubChem-compound 1038
type: UnificationXref
id: 1038
db: PubChem-compound

Reference/UniProt C5ZX97
type: UnificationXref
id: C5ZX97
db: UniProt

Reference/ChemSpider 952
type: UnificationXref
id: 952
db: ChemSpider

Compound/PW C001347 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinone-1
stoichiometric coefficient: 1.0

Reference/ChEBI CHEBI 16908
type: UnificationXref
id: CHEBI:16908
db: ChEBI

NAD
type: SmallMolecule
cellular location: Inner Membrane
entity reference: NAD

Reference/UniProt C5ZXY2
type: UnificationXref
id: C5ZXY2
db: UniProt

Ubiquinone-1
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 16389
xref: Reference/ChemSpider 4307
xref: Reference/PubChem-compound 4462
xref: Reference/CAS 727-81-1
xref: Reference/HMDB HMDB0002012
xref: Reference/KEGG Compound C00399
chemical formula: C14H18O4
molecular weight: 250.12051
structure: ChemicalStructure/PW C001347

Ubiquinol-1
type: SmallMolecule
entity reference: Ubiquinol-1

Arginine biosynthesis bifunctional protein ArgJ
type: ProteinReference
xref: Reference/UniProt C5ZXJ4
organism: Helicobacter canadensis MIT 98-5491

Reference/ChemSpider 1010
type: UnificationXref
id: 1010
db: ChemSpider

Reference/GENE ONTOLOGY GO 0070258
type: UnificationXref
id: GO:0070258
db: GENE ONTOLOGY

Transcription-repair-coupling factor
type: ProteinReference
xref: Reference/UniProt C5ZX01
organism: Helicobacter canadensis MIT 98-5491

Oxidative Phosphorylation
type: Pathway
pathway order: PathwayEnzymeReaction/6170690
pathway order: PathwayEnzymeReaction/6170688
pathway order: PathwayEnzymeReaction/6170689
pathway order: PathwayEnzymeReaction/6170686
pathway order: PathwaySubPathway/446000
pathway order: PathwayEnzymeReaction/6170685
pathway component: ReactionCoupledTransportCatalysis18998
pathway component: ReactionCatalysis927745
pathway component: 1.6.99.5
pathway component: ReactionCoupledTransport18938
pathway component: 1.10.3.10
pathway component: 1.10.3.14
pathway component: Reaction915999
pathway component: ReactionCoupledTransportCatalysis19001
pathway component: ReactionCoupledTransportCatalysis19000
pathway component: Porphyrin Metabolism
pathway component: ReactionCoupledTransportCatalysis18999
xref: Reference/PathWhiz PW685235
xref: Reference/SMPDB SMP0644890
organism: Helicobacter canadensis MIT 98-5491

RNA pseudouridylate synthase
type: ProteinReference
xref: Reference/UniProt C5ZYE3
organism: Helicobacter canadensis MIT 98-5491

Predicted AzlC-related branched-chain amino acid permease
type: ProteinReference
xref: Reference/UniProt C5ZXB4
organism: Helicobacter canadensis MIT 98-5491

Citrate synthase
type: ProteinReference
xref: Reference/UniProt C5ZX97
organism: Helicobacter canadensis MIT 98-5491

Putative dehydrogenase
type: ProteinReference
xref: Reference/UniProt C5ZZC1
organism: Helicobacter canadensis MIT 98-5491

OorD subunit of 2-oxoglutarate:acceptor oxidoreductase
type: ProteinReference
xref: Reference/UniProt C5ZX36
organism: Helicobacter canadensis MIT 98-5491

Oxygen
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Oxygen

Predicted AzlC-related branched-chain amino acid permease
type: Protein
cellular location: Inner Membrane
entity reference: Predicted AzlC-related branched-chain amino acid permease

Ubiquinone-1
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Ubiquinone-1

Reference/UniProt C5ZYV3
type: UnificationXref
id: C5ZYV3
db: UniProt

Reference/BioCyc CPD-6641
type: UnificationXref
id: CPD-6641
db: BioCyc

Acetate permease
type: Protein
cellular location: Inner Membrane
entity reference: Acetate permease

Reference/BioCyc SUC
type: UnificationXref
id: SUC
db: BioCyc

Reference/CAS 58-68-4
type: UnificationXref
id: 58-68-4
db: CAS

Probable membrane transporter protein
type: ProteinReference
xref: Reference/UniProt C5ZY23
organism: Helicobacter canadensis MIT 98-5491

Cytochrome c oxidase, cbb3-type, subunit I
type: ProteinReference
xref: Reference/UniProt C5ZW87
organism: Helicobacter canadensis MIT 98-5491

Uncharacterized protein
type: ProteinReference
xref: Reference/UniProt C5ZYF6
organism: Helicobacter canadensis MIT 98-5491

MATE family efflux transporter
type: ProteinReference
xref: Reference/UniProt C5ZX61
organism: Helicobacter canadensis MIT 98-5491

Acetate permease
type: ProteinReference
xref: Reference/UniProt C5ZWC9
organism: Helicobacter canadensis MIT 98-5491

RodA protein mrdB
type: Protein
cellular location: Inner Membrane
entity reference: RodA protein mrdB

Reference/UniProt C5ZYE3
type: UnificationXref
id: C5ZYE3
db: UniProt

Putative permease
type: ProteinReference
xref: Reference/UniProt C5ZW85
organism: Helicobacter canadensis MIT 98-5491

Hydrogen Ion
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Hydrogen Ion

NADH
type: SmallMolecule
cellular location: Inner Membrane
entity reference: NADH

Reference/ChemSpider 4307
type: UnificationXref
id: 4307
db: ChemSpider

Reference/KEGG Compound C00007
type: UnificationXref
id: C00007
db: KEGG Compound

Reference/UniProt C5ZXB4
type: UnificationXref
id: C5ZXB4
db: UniProt

1.6.99.5
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/5.0
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001144 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000721 Inner Membrane/Stoichiometry/1.0
right: NAD
right: Ubiquinol-1
right: Hydrogen Ion
spontaneous: false
EC number: 1.6.99.5
left: Ubiquinone-1
left: NADH
left: Hydrogen Ion
name: 5 Hydrogen Ion + NADH + Ubiquinone-1 → Hydrogen Ion + NAD + Ubiquinol-1
conversion direction: LEFT_TO_RIGHT

ReactionCoupledTransport18938
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/8.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
right: Water
right: Ubiquinone-1
right: Hydrogen Ion
spontaneous: false
left: Ubiquinol-1
left: Oxygen
left: Hydrogen Ion
name: 8 Hydrogen Ion + Oxygen + 2 Ubiquinol-1 → 8 Hydrogen Ion + 2 Ubiquinone-1 + 2 Water
conversion direction: LEFT_TO_RIGHT

1.10.3.10
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
right: Water
right: Ubiquinone-1
right: Hydrogen Ion
spontaneous: false
EC number: 1.10.3.10
left: Ubiquinol-1
left: Oxygen
left: Hydrogen Ion
name: 4 Hydrogen Ion + Oxygen + 2 Ubiquinol-1 → 4 Hydrogen Ion + 2 Ubiquinone-1 + 2 Water
conversion direction: LEFT_TO_RIGHT

1.10.3.14
type: TransportWithBiochemicalReaction
participant stoichiometry: Compound/PW C040034 Inner Membrane/Stoichiometry/4.0
participant stoichiometry: Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
participant stoichiometry: Compound/PW C001065 Inner Membrane/Stoichiometry/1.0
participant stoichiometry: Compound/PW C001347 Inner Membrane/Stoichiometry/2.0
right: Water
right: Ubiquinone-1
right: Hydrogen Ion
spontaneous: false
EC number: 1.10.3.14
left: Ubiquinol-1
left: Oxygen
left: Hydrogen Ion
name: 4 Hydrogen Ion + Oxygen + 2 Ubiquinol-1 → 4 Hydrogen Ion + 2 Ubiquinone-1 + 2 Water
conversion direction: LEFT_TO_RIGHT

Reference/KEGG Compound C00122
type: UnificationXref
id: C00122
db: KEGG Compound

Reference/KEGG Compound C00001
type: UnificationXref
id: C00001
db: KEGG Compound

Uncharacterized protein
type: Protein
cellular location: Inner Membrane
entity reference: Uncharacterized protein

ChemicalStructure/PW C001347
type: ChemicalStructure
structure format: SMILES
structure data: COC1=C(OC)C(=O)C(CC=C(C)C)=C(C)C1=O

Reference/KEGG Compound C00004
type: UnificationXref
id: C00004
db: KEGG Compound

Inner Membrane
type: CellularLocationVocabulary
xref: Reference/GENE ONTOLOGY GO 0070258

Reference/KEGG Compound C00003
type: UnificationXref
id: C00003
db: KEGG Compound

Compound/PW C040034 Inner Membrane/Stoichiometry/5.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 5.0

Cytochrome d ubiquinol oxidase, subunit I
type: ProteinReference
xref: Reference/UniProt C5ZVG3
organism: Helicobacter canadensis MIT 98-5491

2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
type: ProteinReference
xref: Reference/UniProt C5ZWD5

Integral membrane bound transporter domain-containing protein
type: ProteinReference
xref: Reference/UniProt C5ZYR5
organism: Helicobacter canadensis MIT 98-5491

Fumaric acid
type: SmallMolecule
entity reference: Fumaric acid

Cytochrome d ubiquinol oxidase, subunit II
type: ProteinReference
xref: Reference/UniProt C5ZVG2
organism: Helicobacter canadensis MIT 98-5491

Reaction915999
type: BiochemicalReaction
participant stoichiometry: Compound/PW C001347/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000174/Stoichiometry/1.0
participant stoichiometry: Compound/PW C000088/Stoichiometry/1.0
participant stoichiometry: Compound/PW C042948/Stoichiometry/1.0
right: Fumaric acid
right: Ubiquinol-1
spontaneous: false
left: Succinic acid
left: Ubiquinone-1
name: Succinic acid + Ubiquinone-1 → Fumaric acid + Ubiquinol-1
conversion direction: LEFT_TO_RIGHT

Fumaric acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000134
xref: Reference/ChemSpider 10197150
xref: Reference/CAS 110-17-8
xref: Reference/PubChem-compound 21883788
xref: Reference/KEGG Compound C00122
xref: Reference/BioCyc FUM
xref: Reference/ChEBI CHEBI 18012
chemical formula: C4H4O4
molecular weight: 116.010956
structure: ChemicalStructure/PW C000088

Type VI secretion system component TssM1 N-terminal domain-containing protein
type: ProteinReference
xref: Reference/UniProt C5ZYV3
organism: Helicobacter canadensis MIT 98-5491

Twin-arginine translocation pathway signal
type: Protein
cellular location: Inner Membrane
entity reference: Twin-arginine translocation pathway signal

cytochrome bo terminal oxidase
type: Complex
cellular location: Inner Membrane
component: Integral membrane bound transporter domain-containing protein
component: Type VI secretion system component TssM1 N-terminal domain-containing protein
component: Uncharacterized protein
component: Cytochrome c oxidase, cbb3-type, subunit I

Reference/UniProt C5ZWC9
type: UnificationXref
id: C5ZWC9
db: UniProt

Putative permease
type: Protein
cellular location: Inner Membrane
entity reference: Putative permease

Reference/ChEBI CHEBI 15741
type: UnificationXref
id: CHEBI:15741
db: ChEBI

NAD
type: SmallMoleculeReference
xref: Reference/ChEBI CHEBI 15846
xref: Reference/HMDB HMDB0000902
xref: Reference/CAS 53-84-9
xref: Reference/KEGG Compound C00003
xref: Reference/PubChem-compound 5893
xref: Reference/BioCyc NAD
xref: Reference/ChemSpider 5682
chemical formula: C21H27N7O14P2
molecular weight: 663.10913
structure: ChemicalStructure/PW C000721

Reference/PubChem-compound 447920
type: UnificationXref
id: 447920
db: PubChem-compound

Reference/HMDB HMDB0000902
type: UnificationXref
id: HMDB0000902
db: HMDB

Protein/43780/Stoichiometry/1.0
type: Stoichiometry
physical entity: succinate dehydrogenase
stoichiometric coefficient: 1.0

Reference/PubChem-compound 1110
type: UnificationXref
id: 1110
db: PubChem-compound

NADH
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001487
xref: Reference/CAS 58-68-4
xref: Reference/PubChem-compound 439153
xref: Reference/BioCyc NADH
xref: Reference/ChemSpider 388299
xref: Reference/KEGG Compound C00004
xref: Reference/ChEBI CHEBI 16908
chemical formula: C21H29N7O14P2
molecular weight: 665.12476
structure: ChemicalStructure/PW C001144

Transcription-repair-coupling factor
type: Protein
cellular location: Inner Membrane
entity reference: Transcription-repair-coupling factor

Fumarate reductase iron-sulfur subunit
type: ProteinReference
xref: Reference/UniProt C5ZYH5

Succinic acid
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0000254
xref: Reference/CAS 110-15-6
xref: Reference/ChEBI CHEBI 15741
xref: Reference/KEGG Compound C00042
xref: Reference/ChemSpider 1078
xref: Reference/PubChem-compound 1110
xref: Reference/BioCyc SUC
chemical formula: C4H6O4
molecular weight: 118.02661
structure: ChemicalStructure/PW C000174

Hydrogen Ion
type: SmallMoleculeReference
xref: Reference/KEGG Compound C00080
xref: Reference/ChEBI CHEBI 15378
xref: Reference/HMDB HMDB0059597
xref: Reference/PubChem-compound 1038
xref: Reference/ChemSpider 1010
chemical formula: H
molecular weight: 1.007825
structure: ChemicalStructure/PW C040034

Compound/PW C042948 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Ubiquinol-1
stoichiometric coefficient: 2.0

Reference/SMPDB SMP0644890
type: UnificationXref
id: SMP0644890
db: SMPDB

Cytochrome d ubiquinol oxidase, subunit II
type: Protein
cellular location: Inner Membrane
entity reference: Cytochrome d ubiquinol oxidase, subunit II

Reference/CAS 53-84-9
type: UnificationXref
id: 53-84-9
db: CAS

Putative transporter
type: Protein
entity reference: Putative transporter

Compound/PW C040034 Inner Membrane/Stoichiometry/4.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 4.0

Reference/UniProt C5ZX36
type: UnificationXref
id: C5ZX36
db: UniProt

succinate:quinone oxidoreductase
type: Complex
component stoichiometry: Protein/72320/Stoichiometry/1.0
component stoichiometry: Protein/72318/Stoichiometry/1.0
component stoichiometry: Protein/35666/Stoichiometry/1.0
component stoichiometry: Protein/43780/Stoichiometry/1.0
component: Fumarate reductase iron-sulfur subunit
component: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
component: succinate dehydrogenase
component: Putative transporter

Reference/UniProt C5ZYF6
type: UnificationXref
id: C5ZYF6
db: UniProt

Compound/PW C042948/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinol-1
stoichiometric coefficient: 1.0

ReactionCatalysis927745
type: Catalysis
controller: succinate:quinone oxidoreductase
controlled: Reaction915999
control type: ACTIVATION

ChemicalStructure/PW C000721
type: ChemicalStructure
structure format: SMILES

Probable membrane transporter protein
type: Protein
cellular location: Inner Membrane
entity reference: Probable membrane transporter protein

Protein/35666/Stoichiometry/1.0
type: Stoichiometry
physical entity: Putative transporter
stoichiometric coefficient: 1.0

Reference/KEGG Compound C00399
type: UnificationXref
id: C00399
db: KEGG Compound

NADH:ubiquinone oxidoreductase I
type: Complex
cellular location: Inner Membrane
component: Predicted AzlC-related branched-chain amino acid permease
component: Putative permease
component: Putative dehydrogenase
component: Arginine biosynthesis bifunctional protein ArgJ
component: MATE family efflux transporter
component: RNA pseudouridylate synthase
component: Probable membrane transporter protein
component: Acetate permease
component: Citrate synthase
component: Transcription-repair-coupling factor
component: RodA protein mrdB
component: OorD subunit of 2-oxoglutarate:acceptor oxidoreductase
component: Twin-arginine translocation pathway signal

Reference/ChemSpider 5682
type: UnificationXref
id: 5682
db: ChemSpider

Reference/HMDB HMDB0000134
type: UnificationXref
id: HMDB0000134
db: HMDB

ChemicalStructure/PW C001144
type: ChemicalStructure
structure format: SMILES

Reference/HMDB HMDB0000254
type: UnificationXref
id: HMDB0000254
db: HMDB

ChemicalStructure/PW C000174
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)CCC(O)=O

Reference/UniProt C5ZZC1
type: UnificationXref
id: C5ZZC1
db: UniProt

Reference/TAXONOMY 537970
type: UnificationXref
id: 537970
db: TAXONOMY

ReactionCoupledTransportCatalysis18998
type: Catalysis
controller: cytochrome bd-I terminal oxidase
controlled: 1.10.3.14
control type: ACTIVATION

Compound/PW C042948 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinol-1
stoichiometric coefficient: 1.0

Type VI secretion system component TssM1 N-terminal domain-containing protein
type: Protein
cellular location: Inner Membrane
entity reference: Type VI secretion system component TssM1 N-terminal domain-containing protein

SubPathwayInteraction446000
type: Interaction
name: SubPathway446000Reaction
name: SubPathwayReaction

Reference/KEGG Compound C00042
type: UnificationXref
id: C00042
db: KEGG Compound

Reference/ChemSpider 1078
type: UnificationXref
id: 1078
db: ChemSpider

ReactionCoupledTransportCatalysis18999
type: Catalysis
controller: cytochrome bd-II terminal oxidase
controlled: 1.10.3.10
control type: ACTIVATION

OorD subunit of 2-oxoglutarate:acceptor oxidoreductase
type: Protein
cellular location: Inner Membrane
entity reference: OorD subunit of 2-oxoglutarate:acceptor oxidoreductase

Water
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Water

Reference/ChemSpider 10197150
type: UnificationXref
id: 10197150
db: ChemSpider

Protein/72318/Stoichiometry/1.0
type: Stoichiometry
physical entity: Fumarate reductase iron-sulfur subunit
stoichiometric coefficient: 1.0

Reference/BioCyc FUM
type: UnificationXref
id: FUM
db: BioCyc

Reference/CAS 7732-18-5
type: UnificationXref
id: 7732-18-5
db: CAS

Reference/ChemSpider 388299
type: UnificationXref
id: 388299
db: ChemSpider

ChemicalStructure/PW C042948
type: ChemicalStructure
structure format: SMILES
structure data: COC1=C(O)C(C)=C(CC=C(C)C)C(O)=C1OC

Reference/ChEBI CHEBI 18012
type: UnificationXref
id: CHEBI:18012
db: ChEBI

Reference/HMDB HMDB0001487
type: UnificationXref
id: HMDB0001487
db: HMDB

succinate dehydrogenase
type: ProteinReference
xref: Reference/UniProt C5ZYH6

Oxygen
type: SmallMoleculeReference
xref: Reference/HMDB HMDB0001377
xref: Reference/ChemSpider 952
xref: Reference/KEGG Compound C00007
xref: Reference/ChEBI CHEBI 15379
xref: Reference/PubChem-compound 977
xref: Reference/BioCyc CPD-6641
xref: Reference/CAS 7782-44-7
chemical formula: O2
molecular weight: 31.98983
structure: ChemicalStructure/PW C001065

Reference/UniProt C5ZY23
type: UnificationXref
id: C5ZY23
db: UniProt

Reference/SMPDB SMP0000953
type: UnificationXref
id: SMP0000953
db: SMPDB

Compound/PW C001144 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NADH
stoichiometric coefficient: 1.0

Arginine biosynthesis bifunctional protein ArgJ
type: Protein
cellular location: Inner Membrane
entity reference: Arginine biosynthesis bifunctional protein ArgJ

Reference/UniProt C5ZX01
type: UnificationXref
id: C5ZX01
db: UniProt

Reference/CAS 7782-44-7
type: UnificationXref
id: 7782-44-7
db: CAS

Reference/HMDB HMDB0001377
type: UnificationXref
id: HMDB0001377
db: HMDB

Reference/UniProt C5ZYR5
type: UnificationXref
id: C5ZYR5
db: UniProt

Reference/PubChem-compound 962
type: UnificationXref
id: 962
db: PubChem-compound

Compound/PW C001347/Stoichiometry/1.0
type: Stoichiometry
physical entity: Ubiquinone-1
stoichiometric coefficient: 1.0

Putative transporter
type: ProteinReference
xref: Reference/UniProt C5ZWD0

Integral membrane bound transporter domain-containing protein
type: Protein
cellular location: Inner Membrane
entity reference: Integral membrane bound transporter domain-containing protein

Compound/PW C000174/Stoichiometry/1.0
type: Stoichiometry
physical entity: Succinic acid
stoichiometric coefficient: 1.0

Ubiquinol-1
type: SmallMoleculeReference
xref: Reference/PubChem-compound 447920
chemical formula: C14H20O4
molecular weight: 252.13615
structure: ChemicalStructure/PW C042948

Ubiquinone-1
type: SmallMolecule
entity reference: Ubiquinone-1

Reference/PubChem-compound 5893
type: UnificationXref
id: 5893
db: PubChem-compound

Reference/KEGG Compound C00080
type: UnificationXref
id: C00080
db: KEGG Compound

Reference/CAS 110-15-6
type: UnificationXref
id: 110-15-6
db: CAS

ChemicalStructure/PW C001065
type: ChemicalStructure
structure format: SMILES
structure data: O=O

Compound/PW C001420 Inner Membrane/Stoichiometry/2.0
type: Stoichiometry
physical entity: Water
stoichiometric coefficient: 2.0

Reference/UniProt C5ZVG2
type: UnificationXref
id: C5ZVG2
db: UniProt

Reference/UniProt C5ZVG3
type: UnificationXref
id: C5ZVG3
db: UniProt

Reference/HMDB HMDB0002111
type: UnificationXref
id: HMDB0002111
db: HMDB

Reference/PathWhiz PW000936
type: UnificationXref
id: PW000936
db: PathWhiz

Reference/ChEBI CHEBI 15377
type: UnificationXref
id: CHEBI:15377
db: ChEBI

Reference/ChEBI CHEBI 15379
type: UnificationXref
id: CHEBI:15379
db: ChEBI

Reference/ChEBI CHEBI 15378
type: UnificationXref
id: CHEBI:15378
db: ChEBI

ChemicalStructure/PW C040034
type: ChemicalStructure
structure format: SMILES
structure data: [H+]

Purine nucleoside phosphorylase
type: ProteinReference
xref: Reference/UniProt C5ZXY2
organism: Helicobacter canadensis MIT 98-5491

RNA pseudouridylate synthase
type: Protein
cellular location: Inner Membrane
entity reference: RNA pseudouridylate synthase

Reference/UniProt C5ZW85
type: UnificationXref
id: C5ZW85
db: UniProt

cytochrome bd-II terminal oxidase
type: Complex
cellular location: Inner Membrane
component: Cytochrome d ubiquinol oxidase, subunit I
component: Cytochrome d ubiquinol oxidase, subunit II

Reference/UniProt C5ZW87
type: UnificationXref
id: C5ZW87
db: UniProt

Fumarate reductase iron-sulfur subunit
type: Protein
entity reference: Fumarate reductase iron-sulfur subunit

Compound/PW C040034 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 1.0

ReactionCoupledTransportCatalysis19001
type: Catalysis
controller: NADH:ubiquinone oxidoreductase I
controlled: 1.6.99.5
control type: ACTIVATION

ReactionCoupledTransportCatalysis19000
type: Catalysis
controller: cytochrome bo terminal oxidase
controlled: ReactionCoupledTransport18938
control type: ACTIVATION

succinate dehydrogenase
type: Protein
entity reference: succinate dehydrogenase

Reference/UniProt C5ZXJ4
type: UnificationXref
id: C5ZXJ4
db: UniProt

Protein/72320/Stoichiometry/1.0
type: Stoichiometry
physical entity: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
stoichiometric coefficient: 1.0

Reference/PubChem-compound 4462
type: UnificationXref
id: 4462
db: PubChem-compound

Compound/PW C040034 Inner Membrane/Stoichiometry/8.0
type: Stoichiometry
physical entity: Hydrogen Ion
stoichiometric coefficient: 8.0

Cytochrome d ubiquinol oxidase, subunit I
type: Protein
cellular location: Inner Membrane
entity reference: Cytochrome d ubiquinol oxidase, subunit I

Reference/CAS 727-81-1
type: UnificationXref
id: 727-81-1
db: CAS

Water
type: SmallMoleculeReference
xref: Reference/PubChem-compound 962
xref: Reference/ChEBI CHEBI 15377
xref: Reference/KEGG Compound C00001
xref: Reference/ChemSpider 937
xref: Reference/HMDB HMDB0002111
xref: Reference/CAS 7732-18-5
chemical formula: H2O
molecular weight: 18.010565
structure: ChemicalStructure/PW C001420

Reference/HMDB HMDB0002012
type: UnificationXref
id: HMDB0002012
db: HMDB

Reference/BioCyc NADH
type: UnificationXref
id: NADH
db: BioCyc

Reference/BioCyc NAD
type: UnificationXref
id: NAD
db: BioCyc

Ubiquinol-1
type: SmallMolecule
cellular location: Inner Membrane
entity reference: Ubiquinol-1

Reference/PubChem-compound 977
type: UnificationXref
id: 977
db: PubChem-compound

Reference/HMDB HMDB0059597
type: UnificationXref
id: HMDB0059597
db: HMDB

MATE family efflux transporter
type: Protein
cellular location: Inner Membrane
entity reference: MATE family efflux transporter

ChemicalStructure/PW C000088
type: ChemicalStructure
structure format: SMILES
structure data: OC(=O)\C=C\C(O)=O

Citrate synthase
type: Protein
cellular location: Inner Membrane
entity reference: Citrate synthase

Compound/PW C000088/Stoichiometry/1.0
type: Stoichiometry
physical entity: Fumaric acid
stoichiometric coefficient: 1.0

Compound/PW C000721 Inner Membrane/Stoichiometry/1.0
type: Stoichiometry
physical entity: NAD
stoichiometric coefficient: 1.0