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Pathway Description
Operon: Leucine Biosynthesis
Escherichia coli
Category:
Protein Pathway
Sub-Categories:
Gene Regulatory
Cellular Response
Created: 2015-09-09
Last Updated: 2019-08-16
The leuLABCD operon in E. coli contains five genes that are involved in the synthesis of L-leucine. The HTH-type transcriptional regulator LeuO can activate transcription of the operon. However, if leucine tRNA is present in high amounts in the cell, indicating that levels of leucine are sufficient, it can promote early termination of the transcription after the leuL gene is transcribed. If this does not occur, transcription of the full operon will take place.
The first gene in the operon, leuL, encodes the leu operon leader peptide, which may be involved in the attenuation of the transcript depending on the availability of leucine in the cell.
The second gene, leuA, encodes for 2-isopropylmalate synthase, an enzyme that adds the acetyl group from acetyl-CoA to 3-methyl-2-oxobutanoate, forming 2-isopropylmalate in the first step of the biosynthesis pathway of leucine.
The third gene, leuB, encodes 3-isopropylmalate dehydrogenase, an enzyme that catalyzes the oxidation of 3-isopropylmalate to 3-carboxyl-4-methyl-2-oxopentanoate in the third step of leucine biosynthesis.
The fourth and fifth genes, leuC and leuD, encode for the 3-isopropylmalate dehydratase large and small subunits respectively, which combine to form the 3-isopropylmalte dehydratase protein. This is an enzyme that catalzes isomerization of 2-isopropylmalate into 3-isopropylmalate as the second step of leucine biosynthesis.
References
Operon: Leucine Biosynthesis References
Wessler SR, Calvo JM: Control of leu operon expression in Escherichia coli by a transcription attenuation mechanism. J Mol Biol. 1981 Jul 15;149(4):579-97.
Pubmed: 6171647
Bartkus JM, Tyler B, Calvo JM: Transcription attenuation-mediated control of leu operon expression: influence of the number of Leu control codons. J Bacteriol. 1991 Mar;173(5):1634-41. doi: 10.1128/jb.173.5.1634-1641.1991.
Pubmed: 1999384
Wessler SR, Calvo JM: Control of leu operon expression in Escherichia coli by a transcription attenuation mechanism. J Mol Biol. 1981 Jul 15;149(4):579-97. doi: 10.1016/0022-2836(81)90348-x.
Pubmed: 6171647
Yura T, Mori H, Nagai H, Nagata T, Ishihama A, Fujita N, Isono K, Mizobuchi K, Nakata A: Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Nucleic Acids Res. 1992 Jul 11;20(13):3305-8. doi: 10.1093/nar/20.13.3305.
Pubmed: 1630901
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y: The complete genome sequence of Escherichia coli K-12. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453.
Pubmed: 9278503
Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, Choi S, Ohtsubo E, Baba T, Wanner BL, Mori H, Horiuchi T: Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol Syst Biol. 2006;2:2006.0007. doi: 10.1038/msb4100049. Epub 2006 Feb 21.
Pubmed: 16738553
Wallon G, Yamamoto K, Kirino H, Yamagishi A, Lovett ST, Petsko GA, Oshima T: Purification, catalytic properties and thermostability of 3-isopropylmalate dehydrogenase from Escherichia coli. Biochim Biophys Acta. 1997 Jan 4;1337(1):105-12. doi: 10.1016/s0167-4838(96)00157-4.
Pubmed: 9003442
Magyar C, Szilagyi A, Zavodszky P: Relationship between thermal stability and 3-D structure in a homology model of 3-isopropylmalate dehydrogenase from Escherichia coli. Protein Eng. 1996 Aug;9(8):663-70.
Pubmed: 8875643
Wallon G, Kryger G, Lovett ST, Oshima T, Ringe D, Petsko GA: Crystal structures of Escherichia coli and Salmonella typhimurium 3-isopropylmalate dehydrogenase and comparison with their thermophilic counterpart from Thermus thermophilus. J Mol Biol. 1997 Mar 14;266(5):1016-31. doi: 10.1006/jmbi.1996.0797.
Pubmed: 9086278
Chen H, Lawrence CB, Bryan SK, Moses RE: Aphidicolin inhibits DNA polymerase II of Escherichia coli, an alpha-like DNA polymerase. Nucleic Acids Res. 1990 Dec 11;18(23):7185-6. doi: 10.1093/nar/18.23.7185.
Pubmed: 2124684
Ueguchi C, Ohta T, Seto C, Suzuki T, Mizuno T: The leuO gene product has a latent ability to relieve bgl silencing in Escherichia coli. J Bacteriol. 1998 Jan;180(1):190-3.
Pubmed: 9422614
Henikoff S, Haughn GW, Calvo JM, Wallace JC: A large family of bacterial activator proteins. Proc Natl Acad Sci U S A. 1988 Sep;85(18):6602-6. doi: 10.1073/pnas.85.18.6602.
Pubmed: 3413113
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