Loading Pathway...
Error: Pathway image not found.
Hide
Pathway Description
Gentamicin Action Pathway (New)
Homo sapiens
Category:
Metabolite Pathway
Sub-Category:
Drug Action
Created: 2023-06-15
Last Updated: 2023-10-25
Gentamicin is an aminoglycoside derived from Micromonospora purpurea. This antibiotic is mainly used to treat severe gram-negative infections caused by Pseudomonas aeruginosa. It has some severe adverse effects like nephrotoxicity and ototoxicity which can limit its use. Gentamicin goes through 3 phases to infiltrate the bacterial cell: the first phase is the binding of polycationic antibiotics to the negatively charged bacterial cell membrane, which increases the membrane permeability. The second phase is the entry of the drug through oxygen-dependent active transport into the bacteria where it binds the 30S ribosomal subunit. The final phase is the inhibition of protein synthesis and the accumulation of Gentamicin in the cell which further exacerbates its inhibition of protein synthesis and mistranslation. Much like other aminoglycosides, gentamicin is linked with nephrotoxicity and ototoxicity. While nephrotoxicity is reversible by stopping the usage of gentamicin, ototoxicity can have permanent effects. Gentamicin is administered by intravenous or intramuscular injection. It is also possible to use it as an ophthalmic drop or topical cream.
References
Gentamicin Pathway (New) References
Chaves BJ, Tadi P. Gentamicin. [Updated 2021 Jan 31]. In: StatPearls [Internet]. Treasure Island (FL): StatPearls Publishing; 2021 Jan-. Available from: https://www.ncbi.nlm.nih.gov/books/NBK557550/
Hathorn E, Dhasmana D, Duley L, Ross JD: The effectiveness of gentamicin in the treatment of Neisseria gonorrhoeae: a systematic review. Syst Rev. 2014 Sep 19;3:104. doi: 10.1186/2046-4053-3-104.
Pubmed: 25239090
Gill AE, Amyes SG: The contribution of a novel ribosomal S12 mutation to aminoglycoside resistance of Escherichia coli mutants. J Chemother. 2004 Aug;16(4):347-9. doi: 10.1179/joc.2004.16.4.347.
Pubmed: 15332709
National Center for Biotechnology Information (2021). PubChem Compound Summary for CID 3467, Gentamicin. Retrieved May 20, 2021 from https://pubchem.ncbi.nlm.nih.gov/compound/Gentamicin.
Tamehiro N, Hosaka T, Xu J, Hu H, Otake N, Ochi K: Innovative approach for improvement of an antibiotic-overproducing industrial strain of Streptomyces albus. Appl Environ Microbiol. 2003 Nov;69(11):6412-7. doi: 10.1128/AEM.69.11.6412-6417.2003.
Pubmed: 14602594
Schroeder R, Waldsich C, Wank H: Modulation of RNA function by aminoglycoside antibiotics. EMBO J. 2000 Jan 4;19(1):1-9. doi: 10.1093/emboj/19.1.1.
Pubmed: 10619838
Doi Y, de Oliveira Garcia D, Adams J, Paterson DL: Coproduction of novel 16S rRNA methylase RmtD and metallo-beta-lactamase SPM-1 in a panresistant Pseudomonas aeruginosa isolate from Brazil. Antimicrob Agents Chemother. 2007 Mar;51(3):852-6. doi: 10.1128/AAC.01345-06. Epub 2006 Dec 11.
Pubmed: 17158944
Bogaerts P, Galimand M, Bauraing C, Deplano A, Vanhoof R, De Mendonca R, Rodriguez-Villalobos H, Struelens M, Glupczynski Y: Emergence of ArmA and RmtB aminoglycoside resistance 16S rRNA methylases in Belgium. J Antimicrob Chemother. 2007 Mar;59(3):459-64. doi: 10.1093/jac/dkl527. Epub 2007 Jan 15.
Pubmed: 17224412
Ying L, Zhu H, Shoji S, Fredrick K: Roles of specific aminoglycoside-ribosome interactions in the inhibition of translation. RNA. 2019 Feb;25(2):247-254. doi: 10.1261/rna.068460.118. Epub 2018 Nov 9.
Pubmed: 30413565
Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M: DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037.
Pubmed: 29126136
Highlighted elements will appear in red.
Highlight Compounds
Highlight Proteins
Enter relative concentration values (without units). Elements will be highlighted in a color gradient where red = lowest concentration and green = highest concentration. For the best results, view the pathway in Black and White.
Visualize Compound Data
Visualize Protein Data
Downloads
Settings