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Pathway Description
Spermidine Biosynthesis and Metabolism
Escherichia coli O157:H7
Category:
Metabolite Pathway
Sub-Category:
Metabolic
Created: 2025-02-21
Last Updated: 2025-08-23
Spermidine metabolism starts with S-adenosyl-L-methionine reacting with a hydrogen ion through a adenosylmethionine decarboxylase resulting in the release of a carbon dioxide and a S-adenosyl 3-(methylthio)propylamine. The later compound in turn reacts with putrescine resulting in the release of a hydrogen ion, a spermidine and a S-methyl-5'-thioadenosine. S-methyl-5'-thioadenosine in turn reacts with a water molecule through a 5-methylthioadenosine nucleosidase resulting in the release of a adenine and a S-methyl-5-thio-D-ribose which in in turn is released into the environment.
References
Spermidine Biosynthesis and Metabolism References
Tabor CW, Tabor H: The speEspeD operon of Escherichia coli. Formation and processing of a proenzyme form of S-adenosylmethionine decarboxylase. J Biol Chem. 1987 Nov 25;262(33):16037-40.
Pubmed: 3316212
Fujita N, Mori H, Yura T, Ishihama A: Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Nucleic Acids Res. 1994 May 11;22(9):1637-9. doi: 10.1093/nar/22.9.1637.
Pubmed: 8202364
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y: The complete genome sequence of Escherichia coli K-12. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453.
Pubmed: 9278503
Xie QW, Tabor CW, Tabor H: Spermidine biosynthesis in Escherichia coli: promoter and termination regions of the speED operon. J Bacteriol. 1989 Aug;171(8):4457-65. doi: 10.1128/jb.171.8.4457-4465.1989.
Pubmed: 2666401
Tabor CW, Tabor H, Xie QW: Spermidine synthase of Escherichia coli: localization of the speE gene. Proc Natl Acad Sci U S A. 1986 Aug;83(16):6040-4. doi: 10.1073/pnas.83.16.6040.
Pubmed: 3526348
Cornell KA, Riscoe MK: Cloning and expression of Escherichia coli 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase: identification of the pfs gene product. Biochim Biophys Acta. 1998 Mar 4;1396(1):8-14. doi: 10.1016/s0167-4781(97)00169-3.
Pubmed: 9524204
Cornell KA, Swarts WE, Barry RD, Riscoe MK: Characterization of recombinant Eschericha coli 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase: analysis of enzymatic activity and substrate specificity. Biochem Biophys Res Commun. 1996 Nov 21;228(3):724-32. doi: 10.1006/bbrc.1996.1723.
Pubmed: 8941345
Wurgler SM, Richardson CC: Structure and regulation of the gene for dGTP triphosphohydrolase from Escherichia coli. Proc Natl Acad Sci U S A. 1990 Apr;87(7):2740-4. doi: 10.1073/pnas.87.7.2740.
Pubmed: 2157212
This pathway was propagated using PathWhiz -
Pon, A. et al. Pathways with PathWhiz (2015) Nucleic Acids Res. 43(Web Server issue): W552–W559.
Propagated from SMP0002097
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