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Pathway Description
NAD
Escherichia coli
Category:
Metabolite Pathway
Sub-Category:
Signaling
Created: 2025-02-25
Last Updated: 2025-09-13
The NAD effector pathway is a regulatory system that controls the biosynthesis and salvage of nicotinamide adenine dinucleotide (NAD⁺), a central coenzyme in redox metabolism, energy production, and cellular signaling. This pathway is regulated by NadR, a dual-function protein that acts as both a transcriptional repressor and, in some organisms, a nicotinamide riboside kinase.
NadR is a 45-kDa bifunctional regulator protein. In vivo genetic studies indicate that NadR represses three genes involved in the biosynthesis of NAD. It also participates with an integral membrane protein (PnuC) in the import of nicotinamide mononucleotide, an NAD precursor. NadR senses intracellular NAD⁺ levels and represses the transcription of genes involved in NAD⁺ biosynthesis and uptake when NAD⁺ is abundant. When NAD⁺ levels are low, NadR-mediated repression is relieved, allowing the expression of genes that support NAD⁺ production and import.
Key genes in the NadR regulog include:
nadA – Encodes quinolinate synthase, a key enzyme in the de novo NAD⁺ biosynthesis pathway. It catalyzes the formation of quinolinic acid from iminoaspartate and dihydroxyacetone phosphate, an essential early step in NAD⁺ biosynthesis.
pnuC – Encodes a nicotinamide riboside transporter, which facilitates the uptake of extracellular nicotinamide riboside, enabling NAD⁺ salvage through conversion of imported precursors.
References
NAD References
Grose JH, Bergthorsson U, Roth JR: Regulation of NAD synthesis by the trifunctional NadR protein of Salmonella enterica. J Bacteriol. 2005 Apr;187(8):2774-82. doi: 10.1128/JB.187.8.2774-2782.2005.
Pubmed: 15805524
Ollagnier-de Choudens S, Loiseau L, Sanakis Y, Barras F, Fontecave M: Quinolinate synthetase, an iron-sulfur enzyme in NAD biosynthesis. FEBS Lett. 2005 Jul 4;579(17):3737-43. doi: 10.1016/j.febslet.2005.05.065.
Pubmed: 15967443
Penfound T, Foster JW: NAD-dependent DNA-binding activity of the bifunctional NadR regulator of Salmonella typhimurium. J Bacteriol. 1999 Jan;181(2):648-55. doi: 10.1128/JB.181.2.648-655.1999.
Pubmed: 9882682
Cossart P, Gicquel-Sanzey B: Cloning and sequence of the crp gene of Escherichia coli K 12. Nucleic Acids Res. 1982 Feb 25;10(4):1363-78. doi: 10.1093/nar/10.4.1363.
Pubmed: 6280141
Aiba H, Fujimoto S, Ozaki N: Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor protein. Nucleic Acids Res. 1982 Feb 25;10(4):1345-61. doi: 10.1093/nar/10.4.1345.
Pubmed: 6280140
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y: The complete genome sequence of Escherichia coli K-12. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453.
Pubmed: 9278503
Flachmann R, Kunz N, Seifert J, Gutlich M, Wientjes FJ, Laufer A, Gassen HG: Molecular biology of pyridine nucleotide biosynthesis in Escherichia coli. Cloning and characterization of quinolinate synthesis genes nadA and nadB. Eur J Biochem. 1988 Aug 1;175(2):221-8. doi: 10.1111/j.1432-1033.1988.tb14187.x.
Pubmed: 2841129
Oshima T, Aiba H, Baba T, Fujita K, Hayashi K, Honjo A, Ikemoto K, Inada T, Itoh T, Kajihara M, Kanai K, Kashimoto K, Kimura S, Kitagawa M, Makino K, Masuda S, Miki T, Mizobuchi K, Mori H, Motomura K, Nakamura Y, Nashimoto H, Nishio Y, Saito N, Horiuchi T, et al.: A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map. DNA Res. 1996 Jun 30;3(3):137-55. doi: 10.1093/dnares/3.3.137.
Pubmed: 8905232
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