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Pathway Description
Catechin
Bacillus subtilis (strain 168)
Category:
Metabolite Pathway
Sub-Category:
Signaling
Created: 2025-03-18
Last Updated: 2025-07-22
Bacillus subtilis LmrA is known to be a repressor that regulates the lmrAB and yxaGH operons; lmrB and yxaG encode a multidrug resistance pump and quercetin 2,3-dioxygenase, respectively. The catechin effector pathway is part of a bacterial response system that enables detoxification or resistance to catechins, a group of plant-derived polyphenolic compounds with antimicrobial properties. This pathway is regulated by the LmrA regulog, in which LmrA acts as a transcriptional regulator that responds to the presence of catechins or related stress-inducing compounds.
LmrA typically regulates genes that help counteract the oxidative or membrane-disrupting effects of catechins, supporting bacterial survival in plant-associated or polyphenol-rich environments.
Key genes in the LmrA regulog include:
yxaG – Encodes a glutathione-dependent epoxide hydrolase, an enzyme potentially involved in detoxifying reactive epoxide intermediates generated by catechin metabolism or stress responses.
qodI – Encodes a quinone oxidoreductase, which likely contributes to redox balancing by reducing quinones and mitigating oxidative stress triggered by catechins.
References
Catechin References
Hirooka K, Kunikane S, Matsuoka H, Yoshida K, Kumamoto K, Tojo S, Fujita Y: Dual regulation of the Bacillus subtilis regulon comprising the lmrAB and yxaGH operons and yxaF gene by two transcriptional repressors, LmrA and YxaF, in response to flavonoids. J Bacteriol. 2007 Jul;189(14):5170-82. doi: 10.1128/JB.00079-07. Epub 2007 May 4.
Pubmed: 17483215
Wojdyla Z, Borowski T: DFT study of the mechanism of manganese quercetin 2,3-dioxygenase: quest for origins of enzyme unique nitroxygenase activity and regioselectivity. J Biol Inorg Chem. 2016 Jul;21(4):475-89. doi: 10.1007/s00775-016-1356-9. Epub 2016 May 11.
Pubmed: 27170159
Hirooka K, Fujita Y: Excess production of Bacillus subtilis quercetin 2,3-dioxygenase affects cell viability in the presence of quercetin. Biosci Biotechnol Biochem. 2010;74(5):1030-8. doi: 10.1271/bbb.90928. Epub 2010 May 7.
Pubmed: 20460727
Cossart P, Gicquel-Sanzey B: Cloning and sequence of the crp gene of Escherichia coli K 12. Nucleic Acids Res. 1982 Feb 25;10(4):1363-78. doi: 10.1093/nar/10.4.1363.
Pubmed: 6280141
Aiba H, Fujimoto S, Ozaki N: Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor protein. Nucleic Acids Res. 1982 Feb 25;10(4):1345-61. doi: 10.1093/nar/10.4.1345.
Pubmed: 6280140
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y: The complete genome sequence of Escherichia coli K-12. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453.
Pubmed: 9278503
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