
Loading Pathway...
Error: Pathway image not found.
Hide
Pathway Description
Biofilm formation: epsA, epsB, epsC, epsD, epsE, epsF, epsG, epsH, epsI, epsJ, epsK, epsL, epsM, epsN, epsO
Escherichia coli
Category:
Metabolite Pathway
Sub-Category:
Signaling
Created: 2025-06-20
Last Updated: 2025-06-20
The regulation of the epsABCDEFGHIJKLMNO operon. The operon is inhibited by sinR (HTH-type transcriptional regulator) and activated by sinI. SinR binds to the promoter inhibiting crp from binding and transcribing the operon. SinI is regulated by spo0A (Stage 0 sporulation protein A). When spo0A is present in high concentrations, sinI is expressed. Then sinI binds with sinR to form a sinI-sinR heterodimer. This caused conformational changes to sinR preventing it from binding the to promoter. Therefore, activating the expression of the operon. There are 15 products from this operon: epsA (Polysaccharide chain length determinant N-terminal domain-containing protein), epsB (non-specific protein-tyrosine kinase), epsC (Probable polysaccharide biosynthesis protein), epsD (Putative glycosyltransferase), epsE (Putative glycosyltransferase), epsF (Putative glycosyltransferase), epsG (Transmembrane protein), epsH (Putative glycosyltransferase), epsI (Putative pyruvyl transferase), epsJ (Uncharacterized glycosyltransferase), epsK (Uncharacterized membrane protein EpsK), epsL (Uncharacterized sugar transferase), epsM (UDP-N-acetylbacillosamine N-acetyltransferase), epsN (Putative pyridoxal phosphate-dependent aminotransferase), epsO (Putative pyruvyl transferase). EpsA, epsC, epsG, epsK, epsL are membrane proteins involved in biofilm formation. EpsD, epsE, epsF, epsH, epsI, epsJ, epsN and epsO are types of transferases used in the EPS production. EpsB is an enzyme used to phosphorylate tyrosine residue proteins. EpsM is an enzyme used to add an acetyl group to UDP-N-acetylbacillosamine to make UDP-N,N'-diacetylbacillosamine.
References
Biofilm formation: epsA, epsB, epsC, epsD, epsE, epsF, epsG, epsH, epsI, epsJ, epsK, epsL, epsM, epsN, epsO References
This pathway was propagated using PathWhiz -
Pon, A. et al. Pathways with PathWhiz (2015) Nucleic Acids Res. 43(Web Server issue): W552–W559.
Propagated from SMP0515990
Highlighted elements will appear in red.
Highlight Compounds
Highlight Proteins
Enter relative concentration values (without units). Elements will be highlighted in a color gradient where red = lowest concentration and green = highest concentration. For the best results, view the pathway in Black and White.
Visualize Compound Data
Visualize Protein Data
Settings