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Pathway Description
Thiamine biosynthesis
Arabidopsis thaliana
Category:
Metabolite Pathway
Sub-Category:
Metabolic
Created: 2026-01-05
Last Updated: 2026-01-28
Thiamine biosynthesis in Arabidopsis thaliana assembles the cofactor via convergent thiazole and pyrimidine branches primarily in plastids, producing thiamine monophosphate (TMP) that is transported to cytosol and mitochondria for final activation. The thiazole moiety derives from glycine through THI1, which uses NAD⁺ and its active-site cysteine in a suicide reaction to generate ADP-5-ethyl-4-methylthiazole-2-carboxylate, processed to 4-methyl-5-(2-phosphooxyethyl)thiazole (HET-P); concurrently, the pyrimidine branch taps purine metabolism where THIC rearranges 5-aminoimidazole ribonucleotide (AIR) with SAM to 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P), followed by kinase activation to HMP-PP. TMP synthase (TH1) catalyzes the key condensation of HET-P and HMP-PP to TMP plus pyrophosphate, requiring no further thiazole modification, with TMP then hydrolyzed by phosphatase isoforms (e.g., TH2/TMPPase) to free thiamine; this pathway is validated by pale/viable phenotypes of Arabidopsis thi1, thic, and th1 mutants rescued by thiamine supplementation, reflecting tight plastid-mitochondria coordination.
References
Thiamine biosynthesis References
Rapala-Kozik M, Wolak N, Kujda M, Banas AK: The upregulation of thiamine (vitamin B1) biosynthesis in Arabidopsis thaliana seedlings under salt and osmotic stress conditions is mediated by abscisic acid at the early stages of this stress response. BMC Plant Biol. 2012 Jan 3;12:2. doi: 10.1186/1471-2229-12-2.
Pubmed: 22214485
Hsieh WY, Wang HM, Chung YH, Lee KT, Liao HS, Hsieh MH: THIAMIN REQUIRING2 is involved in thiamin diphosphate biosynthesis and homeostasis. Plant J. 2022 Sep;111(5):1383-1396. doi: 10.1111/tpj.15895. Epub 2022 Jul 18.
Pubmed: 35791282
Kong D, Zhu Y, Wu H, Cheng X, Liang H, Ling HQ: AtTHIC, a gene involved in thiamine biosynthesis in Arabidopsis thaliana. Cell Res. 2008 May;18(5):566-76. doi: 10.1038/cr.2008.35.
Pubmed: 18332905
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