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Showing 540811 - 540820 of 605359 pathways
PathBank ID Pathway Name and Description Pathway Class Chemical Compounds Proteins

SMP0125361

Pw126908 View Pathway

Ubiquinone and other terpenoid-quinone biosynthesis 1636480163 1652153943

Cannabis sativa
Metabolite
Metabolic

SMP0729243

Missing View Pathway

Arabidopyrone Biosynthesis

Arabidopsis thaliana
Metabolite
Metabolic

SMP0729246

Missing View Pathway

Fenugreek Metabolism

Rattus norvegicus
Metabolite
Physiological

SMP0729269

Missing View Pathway

alpha- glucans pathway

Homo sapiens
Fungal α-Glucan (ligand): Presented on the fungal cell wall. It can (a) bind host receptors or (b) mask β-glucan. Dectin-1/Mincle (host cell membrane): C-type lectin receptors on macrophages/DCs that bind α-glucan . Engagement recruits Syk kinase (cytosol) and the CARD9–BCL10–MALT1 complex, activating NF-κB in the nucleus . NF-κB → Cytokines/DC maturation (nucleus): Active NF-κB drives transcription of pro-inflammatory cytokines (TNF-α, IL-12) , leading to dendritic cell maturation (↑MHC-II/CD80/86) and Th1 polarization . This completes the host innate immune response. α-Glucan immune evasion: Fungal α-(1→3)-glucan in the cell wall (gray) physically shields underlying β-glucans, so Dectin-1 cannot detect them . This prevents β-glucan–triggered PRR signaling (no arrow from β-glucan to Dectin-1). Fungal GPCR–cAMP–PKA signaling: In fungal cells (green), α-glucan (or related stimuli) activates a Gα-coupled receptor (GPCR) on the fungal membrane. This triggers adenylyl cyclase → cAMP → PKA in the cytosol (green arrows) . PKA phosphorylates transcription factors (nucleus), upregulating genes for metabolism, cellulase production, and cell differentiation .
Metabolite
Signaling

SMP0729250

Missing View Pathway

Amino Sugar and Nucleotide Sugar Metabolism I

Staphylococcus aureus
The synthesis of amino sugars and nucleotide sugars starts with the phosphorylation of N-Acetylmuramic acid (MurNac) through its transport from the periplasmic space to the cytoplasm. Once in the cytoplasm, MurNac and water undergo a reversible reaction through a N-acetylmuramic acid 6-phosphate etherase, producing a D-lactic acid and N-Acetyl-D-Glucosamine 6-phosphate. This latter compound can also be introduced into the cytoplasm through a phosphorylating PTS permase in the inner membrane that allows for the transport of N-Acetyl-D-glucosamine from the periplasmic space. N-Acetyl-D-Glucosamine 6-phosphate can also be obtained from chitin dependent reactions. Chitin is hydrated through a bifunctional chitinase to produce chitobiose. This in turn gets hydrated by a beta-hexosaminidase to produce N-acetyl-D-glucosamine. The latter undergoes an atp dependent phosphorylation leading to the production of N-Acetyl-D-Glucosamine 6-phosphate. N-Acetyl-D-Glucosamine 6-phosphate is then be deacetylated in order to produce Glucosamine 6-phosphate through a N-acetylglucosamine-6-phosphate deacetylase. This compound can either be isomerized or deaminated into Beta-D-fructofuranose 6-phosphate through a glucosamine-fructose-6-phosphate aminotransferase and a glucosamine-6-phosphate deaminase respectively. Glucosamine 6-phosphate undergoes a reversible reaction to glucosamine 1 phosphate through a phosphoglucosamine mutase. This compound is then acetylated through a bifunctional protein glmU to produce a N-Acetyl glucosamine 1-phosphate. N-Acetyl glucosamine 1-phosphate enters the nucleotide sugar synthesis by reacting with UTP and hydrogen ion through a bifunctional protein glmU releasing pyrophosphate and a Uridine diphosphate-N-acetylglucosamine.This compound can either be isomerized into a UDP-N-acetyl-D-mannosamine or undergo a reaction with phosphoenolpyruvic acid through UDP-N-acetylglucosamine 1-carboxyvinyltransferase releasing a phosphate and a UDP-N-Acetyl-alpha-D-glucosamine-enolpyruvate. UDP-N-acetyl-D-mannosamine undergoes a NAD dependent dehydrogenation through a UDP-N-acetyl-D-mannosamine dehydrogenase, releasing NADH, a hydrogen ion and a UDP-N-Acetyl-alpha-D-mannosaminuronate, This compound is then used in the production of enterobacterial common antigens. UDP-N-Acetyl-alpha-D-glucosamine-enolpyruvate is reduced through a NADPH dependent UDP-N-acetylenolpyruvoylglucosamine reductase, releasing a NADP and a UDP-N-acetyl-alpha-D-muramate. The latter is also involved in the D-glutamine and D-glutamate metabolism.
Metabolite
Metabolic

SMP0729275

Missing View Pathway

presenilin 1 calcium signaling

Mus musculus
Metabolite
Signaling

SMP0729279

Missing View Pathway

Serina-TCA-EMCP

Methylobacterium extorquens PA1
Metabolite
Metabolic

SMP0122566

Pw123877 View Pathway

Methionine

Homo sapiens
Metabolite
Metabolic

SMP0729286

Missing View Pathway

Generated Pathway 1771965371

Homo sapiens
Metabolite
Metabolic

SMP0729290

Missing View Pathway

ILK Signaling

Homo sapiens
Metabolite
Signaling
Showing 540811 - 540820 of 540821 pathways