PathWhiz ID | Pathway | Meta Data |
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PW088255View Pathway |
Bile Acid BiosynthesisBos taurus
A bile acids life begins as cholesterol is catabolized, as bile acid is a derivative of cholesterol. This pathway occurs in the liver, beginning with cholesterol being converted to 7a-hydroxycholesterol through the enzyme cholesterol-7-alpha-monooxygenase, after being transported into the liver cell. 7a-hydroxycholesterol then becomes 7a-hydroxy-cholestene-3-one, which is made possible by the enzyme 3-beta-hydroxysteroid dehydrogenase type 7. 7a-hydroxy-cholestene-3-one then is used in two different chains of reactions. The first, continuing in the liver, uses the enzyme 3-oxo-5-beta-steroid-4-deydrogenase to become 7a-hydroxy-5b-cholestan-3-one. After that, aldo-keto reductase family 1 member C4 is used to create 3a,7a-dihydroxy-5b-cholestane. In the mitochondria of the cell, sterol 26-hydroxylase converts 3a,7a-dihydroxy-5b-cholestane to 3a,7a,26-trihydroxy-5b-cholestane, which is then converted to 3a,7a-dihydroxy-5b-cholestan-26-al by the same enzyme used in the previous reaction. This enzyme is used another time, to create 3a,7a-dihydroxycoprostanic acid. Then, bile acyl-CoA synthetase teams up with 3a,7a-dihydroxycoprostanic acid to create 3a,7a-dihydroxy-5b-cholestanoyl-CoA. 3a,7a-dihydroxy-5b-cholestanoyl-CoA remains intact while alpha-methylacyl-CoA racemase moves it along through the peroxisome. Peroxisomal acyl coenzyme A oxidase 2 converts 3a,7a-dihydroxy-5b-cholestanoyl-CoA into 3a,7a-dihydoxy-5b-cholest-24-enoyl-CoA. With the help of water, peroxisomal multifunctional enzyme type 2 turns 3a,7a-dihydoxy-5b-cholest-24-enoyl-CoA into 3a,7a,24-trihydoxy-5b-cholestanoyl-CoA. This compound then uses peroxisomal multifunctional enzyme type 2 to create chenodeoxycholoyl-CoA. From there, propionyl-CoA and chenodeoxycholoyl-CoA join forces and enlist the help of non-specific lipid transfer protein to further chenodeoxycholoyl-CoAâ€TMs journey in the peroxisome. It is then transported back into intracellular space, where after its used in 3 different reactions, its derivatives interact with intestinal microflora in the extracellular space to become lithocholyltaurine, lithocholic acid glycine conjugate, and lithocholic acid. Revisiting 7a-hydroxy-cholestene-3-one, the second chain of reactions it is involved in follows a similar path as the first, moving through the mitochondria, endoplasmic reticulum and peroxisome until choloyl-CoA is formed, which then is used in three reactions so that its derivatives may leave the cell to interact with intestinal microflora and become taurodeoxycholic acid, deoxycholic acid glycine conjugate and deoxycholic acid. There are two more important components of this pathway, both depicting the breakdown of cholesterol into bile acid. These components of the pathway occur in the endoplasmic reticulum membrane, although 2 enzymes, 25-hydroxycholesterol 7-alpha-hydroxylase and sterol 26 hydroxylase, are found in the mitochondria. Bile acids play a very important part in the digestion of foods, and are responsible for the absorption of water soluble vitamins in the small intestine. Bile acids also help absorb fats into the small intestine, a crucial part of any vertebrates diet.
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Creator: Ana Marcu Created On: August 10, 2018 at 12:03 Last Updated: August 10, 2018 at 12:03 |
PW064577View Pathway |
Bile Acid BiosynthesisMus musculus
A bile acids life begins as cholesterol is catabolized, as bile acid is a derivative of cholesterol. This pathway occurs in the liver, beginning with cholesterol being converted to 7a-hydroxycholesterol through the enzyme cholesterol-7-alpha-monooxygenase, after being transported into the liver cell. 7a-hydroxycholesterol then becomes 7a-hydroxy-cholestene-3-one, which is made possible by the enzyme 3-beta-hydroxysteroid dehydrogenase type 7. 7a-hydroxy-cholestene-3-one then is used in two different chains of reactions. The first, continuing in the liver, uses the enzyme 3-oxo-5-beta-steroid-4-deydrogenase to become 7a-hydroxy-5b-cholestan-3-one. After that, aldo-keto reductase family 1 member C4 is used to create 3a,7a-dihydroxy-5b-cholestane. In the mitochondria of the cell, sterol 26-hydroxylase converts 3a,7a-dihydroxy-5b-cholestane to 3a,7a,26-trihydroxy-5b-cholestane, which is then converted to 3a,7a-dihydroxy-5b-cholestan-26-al by the same enzyme used in the previous reaction. This enzyme is used another time, to create 3a,7a-dihydroxycoprostanic acid. Then, bile acyl-CoA synthetase teams up with 3a,7a-dihydroxycoprostanic acid to create 3a,7a-dihydroxy-5b-cholestanoyl-CoA. 3a,7a-dihydroxy-5b-cholestanoyl-CoA remains intact while alpha-methylacyl-CoA racemase moves it along through the peroxisome. Peroxisomal acyl coenzyme A oxidase 2 converts 3a,7a-dihydroxy-5b-cholestanoyl-CoA into 3a,7a-dihydoxy-5b-cholest-24-enoyl-CoA. With the help of water, peroxisomal multifunctional enzyme type 2 turns 3a,7a-dihydoxy-5b-cholest-24-enoyl-CoA into 3a,7a,24-trihydoxy-5b-cholestanoyl-CoA. This compound then uses peroxisomal multifunctional enzyme type 2 to create chenodeoxycholoyl-CoA. From there, propionyl-CoA and chenodeoxycholoyl-CoA join forces and enlist the help of non-specific lipid transfer protein to further chenodeoxycholoyl-CoAâ€TMs journey in the peroxisome. It is then transported back into intracellular space, where after its used in 3 different reactions, its derivatives interact with intestinal microflora in the extracellular space to become lithocholyltaurine, lithocholic acid glycine conjugate, and lithocholic acid. Revisiting 7a-hydroxy-cholestene-3-one, the second chain of reactions it is involved in follows a similar path as the first, moving through the mitochondria, endoplasmic reticulum and peroxisome until choloyl-CoA is formed, which then is used in three reactions so that its derivatives may leave the cell to interact with intestinal microflora and become taurodeoxycholic acid, deoxycholic acid glycine conjugate and deoxycholic acid. There are two more important components of this pathway, both depicting the breakdown of cholesterol into bile acid. These components of the pathway occur in the endoplasmic reticulum membrane, although 2 enzymes, 25-hydroxycholesterol 7-alpha-hydroxylase and sterol 26 hydroxylase, are found in the mitochondria. Bile acids play a very important part in the digestion of foods, and are responsible for the absorption of water soluble vitamins in the small intestine. Bile acids also help absorb fats into the small intestine, a crucial part of any vertebrates diet.
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Creator: Carin Li Created On: January 21, 2018 at 20:24 Last Updated: January 21, 2018 at 20:24 |
PW127090View Pathway |
Bile Acid Biosynthesis 1662027393Homo sapiens
A bile acids life begins as cholesterol is catabolized, as bile acid is a derivative of cholesterol. This pathway occurs in the liver, beginning with cholesterol being converted to 7a-hydroxycholesterol through the enzyme cholesterol-7-alpha-monooxygenase, after being transported into the liver cell. 7a-hydroxycholesterol then becomes 7a-hydroxy-cholestene-3-one, which is made possible by the enzyme 3-beta-hydroxysteroid dehydrogenase type 7. 7a-hydroxy-cholestene-3-one then is used in two different chains of reactions. The first, continuing in the liver, uses the enzyme 3-oxo-5-beta-steroid-4-deydrogenase to become 7a-hydroxy-5b-cholestan-3-one. After that, aldo-keto reductase family 1 member C4 is used to create 3a,7a-dihydroxy-5b-cholestane. In the mitochondria of the cell, sterol 26-hydroxylase converts 3a,7a-dihydroxy-5b-cholestane to 3a,7a,26-trihydroxy-5b-cholestane, which is then converted to 3a,7a-dihydroxy-5b-cholestan-26-al by the same enzyme used in the previous reaction. This enzyme is used another time, to create 3a,7a-dihydroxycoprostanic acid. Then, bile acyl-CoA synthetase teams up with 3a,7a-dihydroxycoprostanic acid to create 3a,7a-dihydroxy-5b-cholestanoyl-CoA. 3a,7a-dihydroxy-5b-cholestanoyl-CoA remains intact while alpha-methylacyl-CoA racemase moves it along through the peroxisome. Peroxisomal acyl coenzyme A oxidase 2 converts 3a,7a-dihydroxy-5b-cholestanoyl-CoA into 3a,7a-dihydoxy-5b-cholest-24-enoyl-CoA. With the help of water, peroxisomal multifunctional enzyme type 2 turns 3a,7a-dihydoxy-5b-cholest-24-enoyl-CoA into 3a,7a,24-trihydoxy-5b-cholestanoyl-CoA. This compound then uses peroxisomal multifunctional enzyme type 2 to create chenodeoxycholoyl-CoA. From there, propionyl-CoA and chenodeoxycholoyl-CoA join forces and enlist the help of non-specific lipid transfer protein to further chenodeoxycholoyl-CoAâ€TMs journey in the peroxisome. It is then transported back into intracellular space, where after its used in 3 different reactions, its derivatives interact with intestinal microflora in the extracellular space to become lithocholyltaurine, lithocholic acid glycine conjugate, and lithocholic acid. Revisiting 7a-hydroxy-cholestene-3-one, the second chain of reactions it is involved in follows a similar path as the first, moving through the mitochondria, endoplasmic reticulum and peroxisome until choloyl-CoA is formed, which then is used in three reactions so that its derivatives may leave the cell to interact with intestinal microflora and become taurodeoxycholic acid, deoxycholic acid glycine conjugate and deoxycholic acid. There are two more important components of this pathway, both depicting the breakdown of cholesterol into bile acid. These components of the pathway occur in the endoplasmic reticulum membrane, although 2 enzymes, 25-hydroxycholesterol 7-alpha-hydroxylase and sterol 26 hydroxylase, are found in the mitochondria. Bile acids play a very important part in the digestion of foods, and are responsible for the absorption of water soluble vitamins in the small intestine. Bile acids also help absorb fats into the small intestine, a crucial part of any vertebrates diet.
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Creator: WishartLab Created On: September 01, 2022 at 04:16 Last Updated: September 01, 2022 at 04:16 |
PW087627View Pathway |
signaling
Bile Acid Direct Signalling Pathway (1)Homo sapiens
Bile acids are synthesized in the liver and stored in the gallbladder. After eating, bile acids are released from the gallbladder into the small intestine. The majority of bile acids are transported back to the liver, but some may then escape enterohepatic circulation to enter systemic circulation. The bile acids, deoxycholic acid (DCA) and chenodeoxy cholic acid (CDCA), may interact with gap junction proteins to cross the blood-brain barrier. Bile acids are endogenous ligands for farnesoid X receptor (FXR) and G-protein coupled BA receptor 1 (TGR5) and once they have crossed the blood brain barrier, the bile acids may interact with these receptors. FXR is a regulator of secretion and transport of bile acids. TGR5 receptor activation increases cAMP synthesis and activates the mitogen-activated protein kinase (MAPK) pathway. TGR5 regulates the use of energy and is a target of interest for metabolic disorders.
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Creator: xuan cao Created On: August 09, 2018 at 11:29 Last Updated: August 09, 2018 at 11:29 |
PW090771View Pathway |
signaling
Bile Acid Direct Signalling Pathway (2)Homo sapiens
In the intestine, L-cells (enteroendocrine cells) can produce glucagon-like peptide 1 (GLP-1) after bile acid activates G-protein coupled bile acid receptor 1 on L-cells. Only small portion of GLP-1 can enter the systemic cirulation, and most of GLP-1 are degraded by dipeptidyl peptidase-4. Therefore, only small portion of GLP-1 can eventually across blood-brain barrier to interact with GLP-1 receptors
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Creator: xuan cao Created On: August 14, 2018 at 10:35 Last Updated: August 14, 2018 at 10:35 |
PW087870View Pathway |
signaling
Bile Acid Indirect Signalling PathwayHomo sapiens
Bile acids are taken up by enterocytes, epithelial cells of the small intestine, where they can activate the nuclear receptor farnesoid X receptor (FXR). This causes the production of fibroblast growth factor 19 (FGF19) which is then transported out of the enterocyte to the portal vein. While most FGF19 goes to the liver, some FGF19 instead enters systemic circulation where it can cross the blood brain barrier and interact with its receptors in the brain. Beta-klotho is a transmembrane protein that promotes the interaction of FGF19 and the receptor to form a stable complex. FGF receptor signaling likely plays a role in energy and glucose metabolism.
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Creator: xuan cao Created On: August 09, 2018 at 16:45 Last Updated: August 09, 2018 at 16:45 |
PW100949View Pathway |
signaling
Bile Acid Signaling ControlsHomo sapiens
Bile acids (BAs) are a diverse group of amphipathic steroid molecules that enable micelle formation and facilitate intes- tinal absorption, emulsification, and transport of nutrients, lipids, and lipophilic vitamins. This pathway is consisted of multiple pathways that are important for body health and possible disease development.
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Creator: xuan cao Created On: August 20, 2018 at 13:50 Last Updated: August 20, 2018 at 13:50 |
PW250703View Pathway |
Biliverdin-IX-delta biosynthesisShewanella denitrificans
Biliverdin-IX-delta serves multiple roles in Shewanella denitrificans, including acting as an antioxidant to protect the cell from oxidative damage and as a signaling molecule. Biliverdin-IX-delta biosynthesis in Shewanella denitrificans is a sequence of enzymatic activities that transform heme, which is acquired from numerous processes such as glutamate metabolism, into biliverdin-IX-delta. Heme oxygenase catalyzes oxidation of heme, integrating oxygen and producing biliverdin-IX-delta, CO, and Fe2+.
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Creator: Julia Wakoli Created On: May 21, 2024 at 12:30 Last Updated: May 21, 2024 at 12:30 |
PW128628View Pathway |
drug action
Bimatoprost Action PathwayHomo sapiens
Bimatoprost is a prostaglandin analog with multiple medical applications. It belongs to the prostamide group of drugs and is available in both ophthalmic solution and implant forms. Primarily, bimatoprost is used to manage elevated intraocular pressure in conditions such as open-angle glaucoma and ocular hypertension. It achieves this by mimicking the effects of prostamides, particularly prostaglandin F2α, to stimulate aqueous humor outflow. This reduction in intraocular pressure helps prevent optic nerve damage.
Additionally, bimatoprost is utilized for a cosmetic purpose – to treat eyelash hypotrichosis, a condition characterized by sparse eyelash growth. This application arose as an unintended but desirable side effect for patients using the drug. Bimatoprost has been approved for these purposes and is available under brand names like Latisse and Lumigan, marketed by Allergan. This versatile medication underscores the importance of understanding its pharmacological actions in different medical contexts.
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Creator: Dorsa Yahya Rayat Created On: September 06, 2023 at 21:15 Last Updated: September 06, 2023 at 21:15 |
PW145006View Pathway |
drug action
Bimatoprost Drug Metabolism Action PathwayHomo sapiens
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Creator: Ray Kruger Created On: October 07, 2023 at 14:54 Last Updated: October 07, 2023 at 14:54 |