SMP0542096
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Benzoate Catabolism Pathway (benABCD Operon Activation)
Fusobacterium gonidiaformans ATCC 25563
Matched Description: as a carbon source and involves the conversion of benzoate into intermediates that can enter the … is activated by the benM gene which encodes for a transcriptional regulator and is outside of this … regulator, enhancing its ability to bind the promoter and facilitate RNA polymerase recruitment, thus … the catechil ortho-cleavage pathway and eventually feeds the TCA cycle. benB encodes benzoate 1,2 … operon is influenced by benK and benP which are also outside of the operon and encode for membrane
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SMP0535982
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Benzoate Catabolism Pathway (benABCD Operon Activation)
Yersinia pseudotuberculosis PB1/+
Matched Description: as a carbon source and involves the conversion of benzoate into intermediates that can enter the … is activated by the benM gene which encodes for a transcriptional regulator and is outside of this … regulator, enhancing its ability to bind the promoter and facilitate RNA polymerase recruitment, thus … the catechil ortho-cleavage pathway and eventually feeds the TCA cycle. benB encodes benzoate 1,2 … operon is influenced by benK and benP which are also outside of the operon and encode for membrane
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SMP0646694
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Benzoate Catabolism Pathway (benABCD Operon Activation)
Bacteroides sp. 1_1_14
Matched Description: as a carbon source and involves the conversion of benzoate into intermediates that can enter the … is activated by the benM gene which encodes for a transcriptional regulator and is outside of this … regulator, enhancing its ability to bind the promoter and facilitate RNA polymerase recruitment, thus … the catechil ortho-cleavage pathway and eventually feeds the TCA cycle. benB encodes benzoate 1,2 … operon is influenced by benK and benP which are also outside of the operon and encode for membrane
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SMP0536245
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Benzoate Catabolism Pathway (benABCD Operon Activation)
Prevotella disiens FB035-09AN
Matched Description: as a carbon source and involves the conversion of benzoate into intermediates that can enter the … is activated by the benM gene which encodes for a transcriptional regulator and is outside of this … regulator, enhancing its ability to bind the promoter and facilitate RNA polymerase recruitment, thus … the catechil ortho-cleavage pathway and eventually feeds the TCA cycle. benB encodes benzoate 1,2 … operon is influenced by benK and benP which are also outside of the operon and encode for membrane
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SMP0536590
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Benzoate Catabolism Pathway (benABCD Operon Activation)
Neisseria cinerea ATCC 14685
Matched Description: as a carbon source and involves the conversion of benzoate into intermediates that can enter the … is activated by the benM gene which encodes for a transcriptional regulator and is outside of this … regulator, enhancing its ability to bind the promoter and facilitate RNA polymerase recruitment, thus … the catechil ortho-cleavage pathway and eventually feeds the TCA cycle. benB encodes benzoate 1,2 … operon is influenced by benK and benP which are also outside of the operon and encode for membrane
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SMP0536912
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Benzoate Catabolism Pathway (benABCD Operon Activation)
Phascolarctobacterium succinatutens YIT 12067
Matched Description: as a carbon source and involves the conversion of benzoate into intermediates that can enter the … is activated by the benM gene which encodes for a transcriptional regulator and is outside of this … regulator, enhancing its ability to bind the promoter and facilitate RNA polymerase recruitment, thus … the catechil ortho-cleavage pathway and eventually feeds the TCA cycle. benB encodes benzoate 1,2 … operon is influenced by benK and benP which are also outside of the operon and encode for membrane
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SMP0568771
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Quorum sensing: N-(3-oxohexanoyl)-L-homoserine lactone Biofilm Regulation
Pseudomonas aeruginosa
Matched Description: binds to specific promoter regions of target genes and activates the expression of key genes within the … alginate biosynthetic operon (alg) and the poly-β-1,6-N-acetyl-D-glucosamine (PGA) operon. The alg … accumulates and activates LasR, it triggers a regulatory cascade that enhances the expression of both operons … , leading to increased biofilm integrity and stability. This dual regulation not only promotes the … stresses and antimicrobial agents, underscoring the importance of quorum sensing in microbial community dynamics and biofilm formation.
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SMP0001886
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Operon: DNA Biosynthesis/Heat Shock Protein
Escherichia coli
Matched Description: The dnaKJ operon in E. coli contains two genes which produce two chaperone and heat shock proteins … protein is produced when the bacteria is exposed to heat or other stress, and allows other heat shock … synthesized proteins and prevents them from aggregating before folding can occur. It can also bind to … proteins that are transported across the cell membrane, as they remain unfolded until they are in place and … unfolding and aggregation. Hsp70 can bind to these proteins, preventing aggregation and allowing proper
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SMP0465024
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Secondary Metabolites: Leucine Biosynthesis
Escherichia coli O55:H7 str. CB9615
Matched Description: acid interacting with acetyl-CoA and a water molecule through a 2-isopropylmalate synthase resulting … in Coenzyme A, hydrogen Ion and 2-isopropylmalic acid. The latter compound reacts with … . This compound interacts spontaneously with hydrogen resulting in the release of carbon dioxide and … -chain amino-acid aminotransferase resulting in Oxoglutaric acid and L-leucine. 2-isopropylmalate … synthase and terminal transaminase TyrB can both be suppressed by leucine. 2-keto-isovalerate and
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SMP0474979
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Polymyxin Resistance
Bacteroides clarus YIT 12056
Matched Description: oxoglutaric acid and UDP-4-amino-4-deoxy-beta-L-arabinopyranose The latter compound interacts with … a tetrahydrofolate, a hydrogen ion and a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose, which in … turn reacts with a product of the methylerythritol phosphate and polysoprenoid biosynthesis pathway … ditrans, octacis-undecaprenyl phosphate hypothetically reacts with water and results in the release … of a formic acid and 4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate
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